Puma concolor (puma): 112862195
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Entry
112862195 CDS
T08890
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03320
PPAR signaling pathway
pcoo04659
Th17 cell differentiation
pcoo04919
Thyroid hormone signaling pathway
pcoo04920
Adipocytokine signaling pathway
pcoo04928
Parathyroid hormone synthesis, secretion and action
pcoo05200
Pathways in cancer
pcoo05202
Transcriptional misregulation in cancer
pcoo05207
Chemical carcinogenesis - receptor activation
pcoo05216
Thyroid cancer
pcoo05222
Small cell lung cancer
pcoo05223
Non-small cell lung cancer
pcoo05226
Gastric cancer
pcoo05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
112862195 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
112862195 (RXRB)
03320 PPAR signaling pathway
112862195 (RXRB)
04919 Thyroid hormone signaling pathway
112862195 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
112862195 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112862195 (RXRB)
05202 Transcriptional misregulation in cancer
112862195 (RXRB)
05207 Chemical carcinogenesis - receptor activation
112862195 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
112862195 (RXRB)
05216 Thyroid cancer
112862195 (RXRB)
05222 Small cell lung cancer
112862195 (RXRB)
05223 Non-small cell lung cancer
112862195 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
112862195 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoo03000
]
112862195 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pcoo03310
]
112862195 (RXRB)
Transcription factors [BR:
pcoo03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
112862195 (RXRB)
Nuclear receptors [BR:
pcoo03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
112862195 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
112862195
NCBI-ProteinID:
XP_025781205
UniProt:
A0A6P6HZE7
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAGEQQTP
EPEPGEAGRDGMGDSGRGECPSGRTGEPVTALSATPPPXXXXXXXXXPPPMPPPPLGSPF
PVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPP
PPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ
RNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVDRILEAELAVEQ
KSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLR
AGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRM
DKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRL
PALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcctcccggtggcggcggcgacgg
ccctggctggatcccgcggcggcggcggcggcggcagcagccggagaacaacaaaccccg
gagccggagccaggggaggctggacgggacgggatgggcgacagcgggcggggtgagtgt
cctagcggacggaccggcgaaccagtcaccgcgttatctgcgacccctcccccnnnnnnn
nnnnnnnnnnnnnnnnnnnccccacccccgatgccaccccctccactgggctcccctttc
ccagtcatcagctcttccatggggtcccctggtctgccccctccagctcccccaggattc
tccgggcctgtcagcagtccccagattaactcaacagtgtcgctccctgggggtgggtct
ggcccccctgaagatgtgaagccaccagtcttaggggtccggggcctgcactgtccaccc
cctccaggtggccctggggctggtaaacggctatgtgcaatctgcggggaccgaagctca
ggcaaacactacggggtttacagctgtgagggctgcaaaggcttcttcaagcgtaccatc
cgtaaggacctgacctactcgtgccgggacaacaaggactgcacagtggacaagcgccag
cgaaaccgctgtcagtactgccgttatcagaagtgcctggccactggcatgaagagggag
gcggtacaggaggaacgtcagcgggggaaggacaaggacggggatggggagggggctggg
ggagcccccgaggagatgcctgtggacaggatcctggaggcagagcttgccgtggagcag
aagagtgaccagggcgttgagggtcctgggggaaccgggggtagcggcagcagcccaaat
gaccccgtgactaacatctgtcaggcagctgacaaacagctattcacgcttgttgagtgg
gcgaagaggatcccacatttttcttccttgcctctggatgaccaggtcatattgctacgg
gcaggctggaacgagctcctcattgcttccttctcccaccgatccattgatgtccgagat
ggcatcctcctcgccacaggtcttcatgtgcaccgcaactcagcccattctgcaggcgtg
ggagccatctttgatcgggtgctgacagagctagtgtccaaaatgcgtgacatgaggatg
gacaagacagagcttggctgcctgagggcaatcattctgttcaatccagatgccaagggt
ctctccaaccccagtgaggtggaggttctgagggagaaagtgtatgcatcactggagacc
tactgcaaacagaagtaccctgagcagcagggacggtttgccaagctgctgctacgtctt
cctgccctcaggtccattggccttaagtgtctagaacatctgtttttcttcaagctcatt
ggagacacccccattgacaccttcctcatggagatgcttgaggctccccaccagctggcc
tga
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