Puma concolor (puma): 112862525
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Entry
112862525 CDS
T08890
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03082
ATP-dependent chromatin remodeling
pcoo04714
Thermogenesis
pcoo05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112862525 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
112862525 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
112862525 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoo03000
]
112862525 (ARID1A)
03021 Transcription machinery [BR:
pcoo03021
]
112862525 (ARID1A)
03036 Chromosome and associated proteins [BR:
pcoo03036
]
112862525 (ARID1A)
Transcription factors [BR:
pcoo03000
]
Eukaryotic type
Helix-turn-helix
ARID
112862525 (ARID1A)
Transcription machinery [BR:
pcoo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112862525 (ARID1A)
Chromosome and associated proteins [BR:
pcoo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112862525 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
112862525
NCBI-ProteinID:
XP_025781617
UniProt:
A0A6P6I0R2
LinkDB
All DBs
Position
Unknown
AA seq
2047 aa
AA seq
DB search
TPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQ
LLTSPSSARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAASGGAQQR
SHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPSSGPQQGHG
YPGQPYGSQTPQRYPMAMQGRAQSTMGGLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSP
HPQQQQPPYSQQPPSQNPHAQPSYQQQPQSQPPQLPSSQPPYSQQPSQPPHQQSPTPYPS
QQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQR
FPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGA
LSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSP
AAVPGNQMPPRPPSGQSDSIMHPSVNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQP
SGGQMHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMG
AGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQE
TAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGTMAN
NSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGG
EPERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWREL
ATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPA
GSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSD
PTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGM
GDPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPNLMPSNPDS
GMYSPSRYPPQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTY
GPPAKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNTYPA
TAAAATERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVTQQGTM
WQGRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGP
SAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAG
PPVPASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLK
SGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVG
DPGQRTLLDPGRFSKASSPAPMEGEEEEDLLGPKLEEEEEEEVVENDEEMAFSSKDKAAS
ESSEEKLVSKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTH
FESKTELLPTRPHVPCPPVTRKHVTAAEGTPGTTEQEGPPPDGPPEKRITATMDDMLSTR
SSTLSEEGAKSAEATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLA
KRCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQD
QGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAE
AQDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDR
KNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHM
QNPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDV
LFLIGQS
NT seq
6144 nt
NT seq
+upstream
nt +downstream
nt
actccgggctccggcgcggcggcggccgcaggctccaagccgcctccctcctccagcgcc
tccgcctcctcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggc
ggcccctcagcggccggcgggggaaccccccagcccaccgccacccccaccctcaaccaa
ctgctcacgtcgcccagctcggcccggggctaccagggctaccccgggggcgactacggc
ggcgggccccaggacgggggcgccggcaagggcccggcggacatggcctcgcagtgctgg
ggggctgcggcggcagcagcggcggcggcagcagccgcctcgggaggggcccaacaaagg
agccaccacgcgcccatgagccccgggagcagcggcggcggggggcagccgctcgcccgg
accccgcagccatccagtccaatggatcagatgggcaagatgagacctcagccatatggc
gggactaacccatactcgcaacaacagggaccttcatcaggaccgcagcaaggacatggg
tacccagggcagccatatgggtcccagaccccgcagcggtacccgatggccatgcagggc
cgggcgcagagtaccatgggcggcctctcttatgcacagcagattcctccttatggacaa
caaggccccagtgggtatggtcaacagggccagactccatattacaaccagcaaagtcct
cacccccagcagcagcagccaccctactcccagcagccaccatcccagaaccctcacgcc
cagccttcctatcagcagcagccgcagtctcagccgccacagctcccgtcttctcagcct
ccctattcccagcagccatcccagcctccacatcagcagtccccgactccatacccctcc
cagcaatccacgacgcagcagcacccccagagccagcccccctactcacagccacaggca
cagtctccctaccagcagcagcaacctcagcagccagcctcctcgacgctctcccagcag
gctgcataccctcagccccagtctcagcagtcccagcaaactgcctattcccagcagcgc
ttccctccaccgcaggagttatctcaagattcatttgggtctcaggcatcctcagccccc
tcaatgacctccagtaagggagggcaagaagatatgaacttgagtcttcagtcaagaccc
tcaagcttgcctgatctgtctggttcaatagacgacctccccatggggacagaaggagct
ctgagccctggagtgagcacatcagggatttccagcagccaaggagagcagagtaatcca
gctcagtctcctttctctcctcatacttcccctcacctgcctggcatccgaggcccctcc
ccgtcccctgttggctctcccgccagtgttgcccagtctcgctcaggaccactctcgcct
gctgcagtgccaggcaaccagatgccacctcggccacccagtggccagtcggacagcatc
atgcatccttccgtgaatcagtcgagcattgctcaagatcgaggttacatgcagaggaac
ccccagatgccccagtacagttccccccagcccggctcggccttatctccgcgtcagcct
tcgggtggacagatgcacacaggcatgggctcctaccagcagaactccatggggagctat
ggtccccaggggagtcagtacggcccacagggaggctaccccaggcagccaaactataat
gccttgcccaatgctaactaccccagtgcaggcatggctggaagcatgaaccctatgggt
gctggaggtcagatgcatgggcaacctggcatcccaccttatggcacactccctccaggg
agaatgagtcatgcctccatgggcaaccggccttatggccctaacatggccaatatgcca
cctcaggttgggtcagggatgtgtcccccaccagggggcatgaaccggaaaactcaagaa
actgctgtcgccatgcatgttgctgccaactctatccaaaacaggccaccaggctacccc
aatatgaatcagggaggcatgatgggaacaggacctccctatgggcaagggattaatagt
atggctggcatgatcaaccctcagggacccccgtatcccatgggtggaaccatggccaac
aattcagcagggatggcagccagcccagagatgatgggccttggggacgtcaagttaact
ccagccaccaaaatgaacaacaaggcagatgggacacccaagacagaatccaaatccaag
aaatccagttcttctactacaaccaatgagaagatcaccaagttgtatgagctgggtggt
gagcctgagaggaagatgtgggtggaccgttatctggccttcacggaggagaaggccatg
ggcatgacaaatctgcctgctgtgggtaggaaacctctggacctctatcgcctctatgtg
tctgtgaaggagattggtggattgactcaggtcaacaagaacaaaaaatggcgggaactt
gcgaccaacctcaatgtgggcacctcaagcagcgctgccagctccctgaaaaagcagtac
atccagtgtctctatgcctttgagtgcaagattgaacggggggaagaccctcccccagac
atcttcgcagctgctgattccaagaagtcccagcccaagatccagcctccctctcctgcg
ggatctgggtctatgcaggggccacagacacctcagtcaaccagcagttccatggcagaa
ggaggagacctgaagccaccaactccagcatccacaccacatagtcagatcccccccttg
ccaggcatgagcaggagcaattcagttgggatccaggatgcctttcctgatggaagtgac
cccacattccagaagcggaattccatgactccaaaccctgggtaccagcccagtatgaat
acctctgacatgatggggcgcatgtcctacgagccaaataaggatccttatggcagcatg
aggaaagctccagggagtgatcccttcatgtcctcagggcagggccccaatggcggaatg
ggagacccctacagccgagctgccggccctgggctgggaaatgtggcgatgggacctcga
cagcactatccctatggaggtccttatgacagagtgaggacggagcctggaataggaccc
gagggaaacatgggcactggagccccacagccgaatctcatgccttccaacccagactcg
gggatgtattctcctagccgctaccccccgcagcagcagcagcagcaacaacgacatgat
tcctatggcaatcagttctccactcaaggcaccccttccggcagccccttccccagccag
cagaccacaatgtatcagcagcagcagcagaattacaagcggccgatggatggcacgtac
ggccctcctgccaagcggcacgaaggggagatgtacagcgtgccgtacagcacggggcag
gggcagccccaacagcagcagttgcccccagcccagccccagcctgccagccagcagcaa
gctgcccagccttcccctcagcaagatgtgtacaaccagtatggcaacacttaccccgcc
actgccgctgctgctactgagcgccgaccagcaggcggcccccagaaccagtttccattc
cagtttggccgagaccgtgtctctgcaccccccggctccaatgcccagcagaacatgcca
ccgcaaatgatgggcggccccatacaggcatcggctgaggttactcagcaaggcaccatg
tggcaagggcgtaatgacatgacctacaattacgccaacaggcagagcactggctctgcc
ccccagggccccgcctatcatggtgtgaaccgaacagatgaaatgctgcacacggatcag
agggccaaccatgaaggcccgtggccttcccatggcacacgtcagcccccatatggtccc
tctgcccccgtgccccccatgacaaggccccctccatccaactaccagcccccgccaagc
atgcagaatcacattcctcaggtatccagccccgctcccctgccccggccaatggagaac
cgcacctcccctagcaagtctccattcctgcactctgggatgaagatgcaaaaggcaggt
cccccagtgcctgcctcgcacatagcacctgcccctgtgcagccacccatgattcggcgg
gacatcaccttcccacctggctctgtggaagcaacacagcctgtgttgaagcagaggagg
cggctcacaatgaaagacattggaaccccggaggcatggcgggtaatgatgtccctcaag
tctgggctgctggcagagagcacatgggcattagacaccattaacatcctgctgtatgac
gacaacagcatcatgaccttcaacctcagtcagctcccagggttgctagagctccttgtg
gaatatttccggcgttgcctcatcgagatctttggtattttaaaggagtatgaggtgggt
gacccaggacagagaacactactggaccctgggagattcagcaaggcgtctagtccagcc
cctatggagggggaggaggaggaagaccttctaggtcctaaactagaggaggaagaagag
gaggaagtagtggaaaatgatgaggagatggccttttcgagcaaggacaaggcggcctcg
gagagtagtgaggagaaactggttagcaagtttgacaagctcccggtaaagatcgtgcag
aagaatgacccgtttgtggtggactgctcagataagcttgggcgtgtgcaggagtttgac
agtggcctgctgcactggcggattggtgggggggacaccactgagcatatccagacccac
tttgagagcaagacagagctgctgcctacccggcctcatgtgccctgcccaccagtcacc
cggaaacacgtcacggcggcagaggggacaccagggacaacagaacaggagggcccccca
cccgatggccctccagagaaacggatcacagccacaatggatgacatgttgtccacccgg
tctagcacgttgagcgaggagggagctaagagtgcagaggccaccaaggagagcagcaag
tttccatttggcatcagcccggcacagagccaccggaacatcaagatcctagaggacgag
ccccacagtaaagatgagaccccactgtgtacccttctggactggcaggattccctcgcc
aagcgctgcgtctgtgtctccaacaccatccgaagcctgtcgttcgtgccaggcaacgac
tttgagatgtccaaacacccggggctgctgctgatcctgggcaagctgatccttctgcac
cacaagcacccagagcggaagcaggcaccactgacttacgagaaggaggaggagcaggac
caaggggtgagctgcaacaaagtggagtggtggtgggactgcttggagatgctccgggaa
aacaccttggtcacactcgccaacatctcggggcagttggacctctccccataccctgag
agcatttgcctgcctgtcctggacggactcctacactgggcagtctgcccttccgccgaa
gcccaggaccccttctccaccctgggccccaacgccgtcctctccccgcagagactggtc
ttggaaaccctcagcaaactcagcatccaggacaacaatgtggacctgatcctggccact
ccccccttcagccgcctggagaagttgtatagcaccatggtgcgcttcctcagtgaccga
aagaacccggtgtgccgggagatggccgtggtactgctggccaatctggcgcagggcgac
agcctggcggcccgtgccatcgcagtgcagaagggcagcatcggcaacctcctgggcttc
ctggaggacagcctcgccgccacacagttccagcagagccaggccagcctgctccacatg
cagaacccgcccttcgagccaactagcgtggacatgatgcggcgggctgcccgcgctctg
ctggccctggccaaggtggacgagaaccactcggagttcacgctgtacgagtcgcggctg
ttggacatctcggtctcaccgttgatgaactcgttggtttcacaagtcatttgtgatgta
ctgtttttgattggccagtcatga
DBGET
integrated database retrieval system
