Puma concolor (puma): 112864108
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Entry
112864108 CDS
T08890
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112864108 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcoo04121
]
112864108 (TRIM54)
Ubiquitin system [BR:
pcoo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112864108 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
DUF349
Sina_RING
CoiA_N
MIF4G_like_2
PHP
DD_DDX21-DDX50
UvrD_C
DUF1421
Zn_ribbon_FGT1_2
SpoIISA_toxin
Motif
Other DBs
NCBI-GeneID:
112864108
NCBI-ProteinID:
XP_025782961
UniProt:
A0A6P6I4B4
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLTQRFEALCAVLEERKAELLQALAREQE
QKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYESMDQFTVSVEHVAEMLRTIDFQAGASGEEEDEEVALEGEEGSAGPEEERPDGP
EGGARPLARVQKYTFPPAFTLGLGKTELGREVEEKPTGESG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaaccagtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgtgccaacgacgtcttccaggcctcgaaccct
ctgtggcaatcccggggctccaccactgtgtcttccggaggccgtttccgttgcccatct
tgcaggcatgaggttgtcctggacagacatggcgtctatggcctgcagagaaacctacta
gtggagaacattatcgacatttacaaacaagagtcttcccgaccactgcactccaaggct
gagcagcaccttatgtgcgaggagcatgaagaggagaagatcaatatctactgcctgagc
tgtgaagtgcccacctgctctctctgtaaggtcttcggtgcccacaaggactgtgaggtg
gcccccctgcccaccatttacaaacgccagaagagtgagctcagcgatggaatcgcaatg
ctggtggccggcaacgaccgcgtgcaggcagtgatcacacagatggaggaggtgtgccag
accatagaggacaatagccggcggcagaagcagttactaacccagaggttcgaggccctg
tgcgcggtgctggaagaacgcaaggctgagttgctgcaggcgctggcccgcgagcaggag
cagaagctgcagcgcgtgcggggcctcatccgccagtacggagaccacctggaggcttcc
tctaagctcgtggagtcggccatccagtccatggaggagccacagatggcgctctacctc
cagcaggccaaggagctgatcaataaggtcgggacaatgtcgaaagtggagctggcagga
cggccagagccgggctatgaaagcatggatcagttcaccgtgagcgtggagcacgtggcc
gaaatgctgaggaccatcgacttccaggcgggcgcttccggggaggaagaggatgaggag
gtggcgttggagggggaagagggcagcgcggggccagaggaagagcggccggatgggccg
gaaggaggggcgcgccccctagcgcgcgtgcagaagtacactttcccaccagcctttact
ctggggcttgggaagaccgagttgggtcgggaggtagaggagaaacccactggggaaagt
gggtga
DBGET
integrated database retrieval system
