Puma concolor (puma): 112864676
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Entry
112864676 CDS
T08890
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03040
Spliceosome
pcoo05202
Transcriptional misregulation in cancer
pcoo05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112864676 (DDX5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
112864676 (DDX5)
05205 Proteoglycans in cancer
112864676 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoo03041
]
112864676 (DDX5)
03009 Ribosome biogenesis [BR:
pcoo03009
]
112864676 (DDX5)
Enzymes [BR:
pcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112864676 (DDX5)
Spliceosome [BR:
pcoo03041
]
Complex A
U1 snRNP components
U1 related factors
112864676 (DDX5)
Complex B
112864676 (DDX5)
Ribosome biogenesis [BR:
pcoo03009
]
Eukaryotic type
Pre-60S particles
Helicases
112864676 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
112864676
NCBI-ProteinID:
XP_025783501
UniProt:
A0A6P6I5R6
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MSGYSSDRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLKRGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLTWSATWPKEVRQLAEDFLKNYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVPNMHNGMNQQAYAYPATAA
APMIGYPMPTGYSQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttattcgagtgaccgagaccgcggccgggatcgagggtttggtgcacctcga
tttgggggaagtagggcagggcccctatctggaaagaagtttggaaaccctggggaaaaa
ctagtcaaaaagaagtggaatcttgatgagctgcccaaatttgagaagaatttttatcaa
gagcaccctgatttggctaggcgcacagcacaagaggtggagacatacagaaggagtaag
gaaattacggttagaggtcacaactgcccaaagccagttctgaatttttatgaagcgaac
ttccctgctaacgtaatggatgtcattgcaagacagaattttactgagcccactgctatt
caagctcagggatggcccgttgctctaagtggattggatatggttggagtagcacagact
ggatccgggaaaacgttgtcttatttgctgcctgctatcgtccacatcaatcatcagcca
ttcctaaagagaggtgatgggcctatttgcttggtgctggcaccaactcgggaactggcc
caacaagtacagcaagtagctgctgaatactgtagagcatgtcgcttgaagtccacttgc
atctatggtggtgctccaaagggaccacaaattcgtgatttggagagaggtgtggaaatc
tgtattgcaacacctggaagactgattgactttttggagtgtgggaaaaccaatctgaga
agaaccacctaccttgtccttgatgaagcagacagaatgcttgatatgggctttgaaccc
caaataaggaagattgtggatcagataagacctgataggcaaaccctaacgtggagtgca
acttggccaaaagaagtaagacagcttgctgaagatttcctgaaaaactacattcacata
aacattggtgcactagaactgagtgcaaaccacaatattcttcagattgtggatgtatgt
catgatgtagaaaaggatgaaaaacttattcgtctaatggaagagatcatgagtgagaag
gagaataaaaccattgtttttgtcgaaaccaaaagaagatgtgatgagcttactagaaaa
atgaggagagacgggtggcccgccatgggtatccatggtgacaagagtcaacaggaacgt
gactgggttctaaatgaattcaaacatggaaaagctcctattctgattgctacagatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacataaagcaagtgagcgaccttatctctgtgctt
cgtgaagctaatcaagcaattaatcccaagttgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgaccgtcgggacagatactctgcgggc
aaaaggggtggatttaatacctttagagacagggaaaattatgaccgaggttattctagt
ctgcttaagagagattttggggcaaaaactcagaatggtgtttacagtgctgcaaattac
accaatgggagctttggaagtaattttgtgtctgctggtatacagaccagttttaggact
ggtaatccaacagggacttaccagaacggttatgatagcactcagcaatatggaagtaac
gttccaaatatgcacaatggtatgaaccaacaggcatatgcatatcctgctactgcagct
gcacctatgattggttatccaatgccaacaggatattctcaataa
DBGET
integrated database retrieval system
