KEGG   Puma concolor (puma): 112864915
Entry
112864915         CDS       T08890                                 
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13
  KO
K08331  autophagy-related protein 13
Organism
pcoo  Puma concolor (puma)
Pathway
pcoo04136  Autophagy - other
pcoo04140  Autophagy - animal
pcoo04211  Longevity regulating pathway
pcoo05010  Alzheimer disease
pcoo05014  Amyotrophic lateral sclerosis
pcoo05016  Huntington disease
pcoo05017  Spinocerebellar ataxia
pcoo05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:pcoo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    112864915 (ATG13)
   04136 Autophagy - other
    112864915 (ATG13)
 09150 Organismal Systems
  09149 Aging
   04211 Longevity regulating pathway
    112864915 (ATG13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    112864915 (ATG13)
   05014 Amyotrophic lateral sclerosis
    112864915 (ATG13)
   05016 Huntington disease
    112864915 (ATG13)
   05017 Spinocerebellar ataxia
    112864915 (ATG13)
   05022 Pathways of neurodegeneration - multiple diseases
    112864915 (ATG13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pcoo04131]
    112864915 (ATG13)
   03029 Mitochondrial biogenesis [BR:pcoo03029]
    112864915 (ATG13)
Membrane trafficking [BR:pcoo04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    112864915 (ATG13)
   Atg1 complex
    112864915 (ATG13)
Mitochondrial biogenesis [BR:pcoo03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    112864915 (ATG13)
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 112864915
NCBI-ProteinID: XP_025783709
UniProt: A0A6P6I7D1
LinkDB
Position
Unknown
AA seq 550 aa
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGG
TYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTDTLRVPMAGLAFSHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNATHPHQLMVPGKEGGVPLAPNQPAHGAQADQER
LATYTPSDGARCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDADPMVNPPDSPETESPLQGSLHSDGSSGGSSGNTHDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVR
EFDAFVETLQ
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggaaactgatctcaattcccaggacagaaaggacctggacaagtttattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggtgagaagatttgtactcgt
tcatcttcatccccgacgggttcagactggttcaatttagcaatcaaagatatcccagag
gttacacatgaagcaaaaaaggccctggcaggacagctgcctgccgttgggagatcgatg
tgtgtggagatctcactcaagacttctgagggcgattccatggagctagaaatttggtgt
cttgaaatgaatgaaaagtgtgataaagagattaaagtttcctacacggtgtacaacaga
ctgtcactgctgctgaagtccctccttgccataactagggtcacaccggcttacagactc
tccagaaaacaggggcatgaatatgtcatattgtacaggatatattttggggaagttcag
ctgaatggtttaggagaaggtttccagacagtgcgtgttgggacagtaggcacccctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcatttatgtctaccaggcaa
tttgagaggaccccacctatcatggggattatcattgatcactttgtggaccgtccgtat
cccagctcctcacctatgcacccctgcaattacagaactgctggtgaggacactggagga
acatatccttctgtggaagattctcaagaagtgtgtaccacctctttctccacctcccct
ccttcccagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtg
acggacactctgagggtccccatggcaggactggccttttcccatcaactctcaagctct
cgcctttcctatcagcctgctgccctgggcgttggatcagctgacctggcttacccagta
gtgtttgctgctggcttaaacgccacacaccctcaccagctcatggttcctgggaaggaa
ggtggggtacccctcgctcccaaccagcctgcacacggtgctcaggccgaccaggagaga
ttggcgacctacaccccttctgatggggcccgctgtgctgccacaccttccagcagcgag
gatactgaaactgtatcaaacagcagtgagggccgggcttccccccatgatgtcttggaa
accatctttgtccgaaaagtgggagcttttgtcaacaagcccatcaaccaggtgaccctg
accagtttggacataccctttgccatgtttgctcccaagaatttggagttggaggatgcc
gatcccatggtgaatcctccagattccccagagactgaatctcctctccagggcagcctg
cactctgatggctccagtgggggtagcagtggcaatacccacgatgactttgttatgatc
gacttcaaaccggctttttctaaagatgacattcttccgatggatttggggaccttctat
cgtgaatttcaaaatccccctcagctgagcagcctctccatagatatcggggcacagtcc
atggctgaggacttggactcactaccagagaagctggctgtgcacgagaagaatgtccga
gaatttgatgcctttgtagaaactctgcagtaa

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