Puma concolor (puma): 112866831
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Entry
112866831 CDS
T08890
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03013
Nucleocytoplasmic transport
pcoo03015
mRNA surveillance pathway
pcoo03040
Spliceosome
pcoo05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112866831 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
112866831 (NCBP1)
03015 mRNA surveillance pathway
112866831 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
112866831 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoo03019
]
112866831 (NCBP1)
03041 Spliceosome [BR:
pcoo03041
]
112866831 (NCBP1)
Messenger RNA biogenesis [BR:
pcoo03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
112866831 (NCBP1)
Spliceosome [BR:
pcoo03041
]
Common components
Common spliceosomal components
Cap binding complex
112866831 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
DUF1690
Cob_adeno_trans
DUF2524
Motif
Other DBs
NCBI-GeneID:
112866831
NCBI-ProteinID:
XP_025785610
UniProt:
A0A6P6IBT4
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVLFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSILTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcggcggcacagcgacgagaatgacgggggacagcctcacaaaaggagaaag
acctctgatgcaaatgaaactgaagatcatttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctctggagagcaacctagaaggcttggcaggtgttttagaagctgat
cttcctaactacaagagcaagatcttaaggcttctttgtacagttgcacgtctgttacct
gagaagctgacaatttatacaacattagttggactgctgaatgccaggaattacaacttt
ggtggagagtttgtagaagctatgattcgtcaacttaaagaatcattgaaagcaaacaat
tacaatgaagctgtatatctggtccgttttttatctgatcttgtgaattgtcatgtcatt
gctgccccatccatggttgctatgtttgaaaattttgtaagtgtaactcaggaagaagat
gtacctcaggtgcggcgggattggtatgtgtatgcatttctgtcctctttgccctgggtt
ggaaaggagttgtatgaaaagaaagacgcagagatggaccgcatctttgccaacactgaa
agctatcttaaaagacgccagaagactcatgtgcccatgttacaagtatggactgctgag
aaaccgcatccgcaagaagagtatttagattgcctgtgggcccagattcagaaattgaaa
aaggatcgttggcaggagcggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagccctgcagcacaacctgcctcctttcacaccaccgcctcatacggaagattcg
gtgtacccgatgccaagggtcctcttcagaatgtttgattacacggatgaccccgagggt
cctgtaatgccagggagccattcagttgaaagatttgtaatagaagagaatcttcactgc
atcattaagtcccactggaaggaaaggaagacttgtgctgcacagctggtgagctatcca
gggaagaacaagatccccttgaactaccacatagttgaggtgatctttgcagagctgttt
cagctcccggcaccccctcacattgatgtgatgtataccacactgctcatcgagctgtgc
aagcttcagcctggttcgctaccccaagttcttgcacaggctactgaaatgttatacatg
cgtttggacacaatgaatactacgtgtgtagacaggtttattaattggttttcccatcat
ctgagtaacttccagttccgttggagctgggaagattggtcagattgtcttactcaagat
cctgaaagtcccaaaccaaagtttgtaagagaagttctagaaaaatgtatgaggttgtct
taccaccagcgtatattagatattgttcctcctaccttctcagctctatgccctgcaaac
ccaacctgcatttacaagtatggagatgaaagtagcaattctcttcctggacattcagtt
gccctctgtttagctgttgcatttaaaagtaaagcaaccaatgatgaaatcttcagcatt
ctgaaagatgtaccaaatcctaaccaggatgatgatgacgatgaaggattcagctttaac
ccattgaaaatagaggtctttgtacagactctgctacacttggcagccaaatcattcagc
cactccttcagtgctcttgcaaagtttcatgaagtcttcaaaaccctagctgagagtgat
gaaggaaagctacatgtcctacgagttatgtttgaggtctggaggaaccatccacagatg
attgctgtactagtagataagatgatccgtacacaaattgttgactgtgccgcagtggca
aattggatcttctcttcagaactctctcgagactttactagattgtttgtttgggaaatc
ttgcactccacaattcgtaagatgaacaaacatgttctgaaaatccagaaagagctggaa
gaagcaaaagaaaaactcgcaaggcaacacaaacggcgaagtgacgatgacgacagaagc
agtgacaggaaagatggggctctagaggagcaaatagaaagactgcaggaaaaagtggaa
tctgctcagagtgaacagaagaatctcttcctcgttatatttcagcgttttatcatgatc
ttgaccgagcacttagtacgatgtgaaacggatgggaccagcatattaacaccatggtat
aagaactgtatagagaggctccagcagatcttcttacagcatcaccaaataatccagcag
tacatggtgaccctggagaacctgctcttcaccgccgaattagaccctcatatcctggct
gtgttccagcagttctgtgccctacaggcctaa
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integrated database retrieval system
