Puma concolor (puma): 112867295
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Entry
112867295 CDS
T08890
Name
(RefSeq) collagen alpha-3(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo04151
PI3K-Akt signaling pathway
pcoo04382
Cornified envelope formation
pcoo04510
Focal adhesion
pcoo04512
ECM-receptor interaction
pcoo04518
Integrin signaling
pcoo04820
Cytoskeleton in muscle cells
pcoo04926
Relaxin signaling pathway
pcoo04933
AGE-RAGE signaling pathway in diabetic complications
pcoo04974
Protein digestion and absorption
pcoo05146
Amoebiasis
pcoo05165
Human papillomavirus infection
pcoo05200
Pathways in cancer
pcoo05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112867295
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112867295
04518 Integrin signaling
112867295
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112867295
09142 Cell motility
04820 Cytoskeleton in muscle cells
112867295
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
112867295
09154 Digestive system
04974 Protein digestion and absorption
112867295
09158 Development and regeneration
04382 Cornified envelope formation
112867295
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112867295
09162 Cancer: specific types
05222 Small cell lung cancer
112867295
09172 Infectious disease: viral
05165 Human papillomavirus infection
112867295
09174 Infectious disease: parasitic
05146 Amoebiasis
112867295
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
112867295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcoo04147
]
112867295
00536 Glycosaminoglycan binding proteins [BR:
pcoo00536
]
112867295
Exosome [BR:
pcoo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112867295
Glycosaminoglycan binding proteins [BR:
pcoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112867295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
112867295
NCBI-ProteinID:
XP_025786062
UniProt:
A0A6P6ID24
LinkDB
All DBs
Position
Unknown
AA seq
1739 aa
AA seq
DB search
MCQKYMQELELSHIVEENRECGGEHGMRAFIQEHRKHMGTQALRTSIHSRFICNSPLTGD
KSNVQPLQSVFSHTTCNFKWNSDNVLEDGFQRELARHWLEGYRNPWMGCVCKDKGQCFCD
GIKGEKGEKGFPGPAGSPGQKGFPGPEGLPGPQGPKGSPGLPGLTGPKGGRGITGLPGFS
GPPGLPGTPGHPGPYGPAGVPGCNGSKGEQGFPGLPGIPGYPGIPGAVGLKGEKGAPAAE
GIELDGRGDPGLPGAPGLQGLPGLPGFPGPVGPPGPPGLFGFPGTMGPPGPKGHMGDNVI
GQKGERGVKGLTGPPGPPGTVIVTLTGPDNRTQDLKGEKGDKGAMGKSGPPGPSGPPGES
YGAEKGAPGEPGPQGKPGKDGTPGFPGTEGAKGNRGFPGLPGEDGIKGWKGDIGPPGFRG
PTEYYDAYQEKGDVGIPGPPGPKGARGPQGPSGPPGVPGSAGSSRPGLRGAPGFPGVKGR
KGERGPPGKNAVGPPGSPGCPGAPGPVGSPGYPGPPAIFLLVFRRIDCENSSGGMVALQK
KAAYFLQLLHYLGYSELVFNKYLIIHCFAGGQGPTGSKGSPGSPGSAGLPGYPGFPGAQG
DPGLKGEKGEAPQPDGQVGAPGDPGLRGHPGRRGLDGIPGTPGVKGSPGPKGEPALTGEK
GDQGPPGDPGTPGPPGPAGPPGPPDYGPQGEPGPKGTRGIPGAPGPPGEAGPKGEFSVST
PVPGPPGPPGLPGRAGPQGPPGIPGSIGKCRYPGLPGPDGEPGIPGIGFPGPPGPKGDQG
FPGAKGSPGCPGEMGKPGSPGEPGLPGAKGEPGLALPGEPGTPGFPGERGNSGKNGEIGL
PGHPGLPGIPGTRGLDGPQGDPGKAGPPGEKGPPGRCMEGPRGAQGLPGLNGLEGQQGRR
GETGPKGDPGIPGLDRSGFPGEPGPPGKPGHRGEVGPPGQKGYPGNPGFLGPPGEKGTIG
MMGYPGHIGPPGPPGNPGTPGQRGDFGIPGAKGEKGHPGAQGEEGDKGPQGPSGISHLLG
DKGEPGLKGFAGKPGEKGNSGVPGLPGLKGLQGPPGPPGPPGPRGDPGNIGNPGAPGPRG
VPGSMGIMGVPGPKGHRGALGLPGLTGRPGLPGVHGLQGEKGEPGYSAGARPGSPGPKGD
PGFPGDMGRKGERGVPGAPGHSGPAGPEGAPGNPGNPGHPGKPGPDGDLGLKGIKGFPGP
PGVKGPPGPPGFPGPPGPMGMRGNQGRDGIPGPAGEKGETGLLEAVPGPRGSPGVPGAKG
DRGAPGLPGLPGRKGIVGDAGPWGPTGMTGLPGPPGFPGAVIPGQKGNRGPPGFRGNPGD
PGPPGPPGSHVRGLKGDKGLLGKPGPRGPPGTVGDEGPPGQPGAPGAPGLPGLRGDPGFH
GFPGVKGEKGNPGFLGPVGPPGQIGPKGPPGIRGDPGTVKIISLPGSPGPPGPVGEPGMQ
GEPGPPGPPGILGPCGPRGKPGKDGRPGTPGPIGEKGNKGCKGEQGPPGLDGLPGLKGKP
GDIGPPTTATAMRGFIFTRHSQTTAIPSCPEGTQPLYSGFSLLFVQGNEQAHGQDLGTLG
SCLQRFTTMPFLFCNINDVCNFASRNDYSYWLSTPALMPMDMAPITGRALEPYISRCTVC
EGPAMAIAIHSQTTDIPSCPHGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRAS
PFIECHGRGTCNYYSNSYSFWLASLNPKRMFRKPIPSTMKAGELEKIISRCRVCMKRRQ
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcagaaatatatgcaggagctagagctctcacacattgtggaggagaacagagaa
tgtgggggagaacacggaatgcgggcatttattcaagagcaccggaagcacatgggcaca
caagccttgcgcacaagtatccacagccgctttatttgtaacagccccctaactggagac
aaatcaaatgtccaaccgctgcaatcggtcttttcccatacgacgtgcaattttaagtgg
aactccgacaatgtcttagaagatgggtttcagagggaacttgcaaggcactggctagaa
ggctaccgtaatccatggatgggctgtgtctgtaaagataaaggccagtgcttctgtgat
gggatcaaaggagagaagggggagaagggctttcctggacccgctggttctcctggccag
aaggggttcccaggtcccgaaggcttgcctggaccgcagggacccaagggctcaccagga
cttccaggactcaccggtcccaaaggtggaaggggaataactggattgccaggattctca
ggtcctcctggacttccaggcaccccgggccatcctggaccatatggacctgctggtgta
ccagggtgcaatggttctaagggtgagcaagggtttccaggccttccagggataccaggc
tacccggggatcccgggtgctgttggcttgaaaggagaaaagggagctcctgctgcagaa
ggtatagaacttgatggaagaggtgaccccgggttgccaggagccccaggattacagggc
ttaccaggccttccaggttttcctggacccgttggtccacctggccctccagggctcttt
ggctttccaggaaccatgggacctccgggacctaagggtcacatgggcgataatgtgata
ggacaaaaaggagagcggggtgtgaaaggattgacaggaccccctggaccaccaggaacg
gttattgtgacgctaaccggcccagataacagaacgcaggacctcaagggagagaaaggg
gacaagggagccatgggcaaatccggacctcctggaccctcaggaccacctggggaatct
tatggagctgaaaaaggtgctcctggagaacctggcccgcagggaaaacctggaaaagat
ggaacccctggtttccctggcactgagggagccaaaggcaacaggggcttccctgggtta
ccaggggaagacggcattaaggggtggaaaggggacattggccctccaggattccgtggt
ccaacagaatattacgatgcataccaggaaaagggggatgtaggaattccaggcccacca
ggccccaaaggagctcgtggcccacagggtcccagtggtcctcctggagttcctggaagt
gctgggtcgtcgaggcctggcctcagaggagcccctggattcccaggcgtgaaaggaagg
aaaggggaacgaggacccccgggaaagaatgcagtggggcctcctgggtccccgggttgt
cctggggcaccaggccccgtagggtcgccgggatacccaggaccaccagccatcttcctg
ctggtgtttcgtcgcattgactgtgaaaacagctctggtggaatggtggctttgcagaag
aaagcagcctatttcctgcagctcctgcattacctgggctactcagagttggtattcaac
aaatatttaataattcactgctttgcaggcggacaagggccaactggcagtaaaggaagc
ccagggtccccaggaagtgcgggtcttcccggatatccagggttcccgggtgctcagggg
gatccaggacttaaaggagaaaaaggggaagcacctcaacctgatggacaagtgggtgcc
ccaggggaccctgggctcagagggcatcctggaagaagaggcttggatgggattcctgga
acccccggggtaaaaggatcaccaggacctaaaggggaaccggccctgactggtgagaag
ggggaccagggtcctccaggggatcccggcacccctgggcccccgggacctgcaggacca
cctggaccaccagactatggaccgcagggagagcctggtccaaagggtacccgaggaatt
cctggagcccccggaccacctggagaagccggtcctaagggagaattcagtgtttcgaca
ccagtcccagggcccccaggacctccagggctccctggccgtgctggcccccaaggtccg
cctggtatccctggatccataggaaaatgtcgttatccgggtcttcctgggcctgatggt
gaaccagggattccaggaattggcttccctgggcccccaggacctaagggagaccaaggt
tttccaggagcaaaaggatcaccaggttgtccaggagaaatgggaaagcctgggtcacct
ggagaaccaggtctccccggagccaagggagagccgggactagccttgcctggagaacca
ggaacgccaggttttccgggagaaagaggcaattctgggaaaaatggagaaattggactc
cctggacatccaggtctccctggaattccaggaaccagagggcttgatggaccacaaggg
gatccagggaaggctggaccacctggagaaaaaggacccccaggaaggtgcatggagggt
cccaggggagcccaaggacttccaggattaaatggattggaaggtcaacaaggcagaaga
ggtgaaacggggccaaagggagacccaggtattccaggcttggataggtcaggctttcct
ggagaacccggaccaccagggaagccaggtcatcgaggtgaggtgggaccacctggtcaa
aaaggatatccaggaaatccaggatttttaggaccaccaggtgaaaaaggaacgattggc
atgatgggctatccgggacacattggtcctccggggcctcccggaaacccaggaacccca
ggacagaggggtgactttggaatcccaggagcaaagggtgagaaagggcacccaggagcc
cagggtgaagaaggagacaaaggaccccaggggccttctggaatatcccacctactgggg
gacaaaggagaaccaggcctcaaaggatttgcagggaagccgggtgagaaaggaaacagt
ggtgttccagggttaccgggtttaaaaggactccaagggccacctggaccaccaggacca
ccaggccccagaggagatccaggcaacattgggaatcccggggcaccaggaccacgtggc
gtgccaggaagcatggggatcatgggggtgccaggtcctaaaggacacaggggagctttg
ggactaccaggtttaactggaaggccaggcctcccaggtgttcacggtctccaaggagag
aagggagagccgggttattcagcaggtgcaaggccaggatcaccgggaccaaagggagat
ccaggatttccaggtgacatgggaaggaaaggagaaagaggggtacctggagcacctgga
cattcggggcctgctggacctgagggagcccctggaaaccccggaaatcctggtcaccca
ggaaagccgggccctgatggtgatttggggttaaaaggcattaaaggcttccccggtcct
ccaggagtaaaaggccctccaggacctccaggatttccaggacctcccggaccaatgggg
atgagaggcaaccagggacgtgatggaatccctggcccagcaggagaaaagggagaaaca
ggtttgctggaagcagttccaggccccagagggagccctggagttccaggagccaaagga
gacaggggagccccaggcttacccggcctccccggcaggaaagggatagtgggagatgcc
gggccgtggggacccaccggcatgacgggactcccaggaccaccgggttttcctggcgca
gtcatccctggccagaaaggaaatcgaggtccaccaggcttcagaggaaacccaggtgac
cctggtcctccgggacctccagggagtcacgtgagaggcttgaaaggagacaaggggctt
ctgggcaagcctggccctagaggtccacctggaactgtaggagatgaggggccaccgggt
cagccgggagcaccaggtgccccaggtctgccagggctcagaggtgatccgggattccat
ggatttccaggtgtaaaaggggagaagggtaatccaggatttctgggaccagttggacct
ccagggcaaattgggccaaaaggaccacccggtatacgtggagaccctggcacagttaag
atcatctccctcccgggaagcccggggccacctggacctgttggagaaccagggatgcaa
ggagagcctgggccaccggggccaccaggaatcctaggaccctgtgggccaagaggtaaa
ccaggcaaggatggaaggccaggaactcctgggccaattggagaaaaaggcaacaaaggc
tgtaaaggagagcaaggaccccctggtttggatggactgccaggcttgaagggcaaacct
ggagacattggaccacccacaactgcaacagccatgagaggcttcatcttcaccaggcac
agtcagaccacagccatcccttcctgcccagaaggcacacagccgctctatagtgggttc
tctcttctttttgtacaaggaaatgaacaagcccacggacaagacctgggaacccttggc
agctgcctgcagcgatttaccacaatgccattcttgttttgtaacatcaatgacgtatgc
aattttgcatctcgaaatgactattcatactggctgtcaacaccagctctgatgccaatg
gacatggctccaattactggcagggccctggagccttatattagcagatgcaccgtctgt
gaaggtcctgcgatggccatagctatccacagccaaaccactgacattccctcctgtcct
cacggctggatttctctctggaaaggattctcttttatcatgttcacaagtgcaggttct
gagggcgcaggtcaggctctggcatcccccgggtcctgtctggaagaattccgagccagt
ccatttatagaatgtcatggaagaggaacgtgcaactactattcaaattcctacagtttc
tggttggcttcattaaaccccaaaagaatgttcagaaaacctattccatcaactatgaaa
gctggggagttagaaaagataataagtcgctgtcgggtgtgcatgaagagaagacaatga
DBGET
integrated database retrieval system