Puma concolor (puma): 112868554
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Entry
112868554 CDS
T08890
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03082
ATP-dependent chromatin remodeling
pcoo04714
Thermogenesis
pcoo05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112868554 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
112868554 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
112868554 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoo03021
]
112868554 (SMARCA2)
03036 Chromosome and associated proteins [BR:
pcoo03036
]
112868554 (SMARCA2)
Transcription machinery [BR:
pcoo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112868554 (SMARCA2)
Chromosome and associated proteins [BR:
pcoo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
112868554 (SMARCA2)
Chromatin remodeling factors
BAF complex
112868554 (SMARCA2)
PBAF complex
112868554 (SMARCA2)
GBAF(ncBAF) complex
112868554 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
112868554
NCBI-ProteinID:
XP_025787304
UniProt:
A0A6P6IHN6
LinkDB
All DBs
Position
Unknown
AA seq
1621 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM
GSADFPQEGIHQMHKPIDGMHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPLLSGDPQAMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQPQPQPQPPSQPQPQAQQPQQQAL
VNYNRPSDEKTKAQLAQAYATSRWVNQPDKNVFGLNGLKKSSLVIKEKCVPLSAHIRGLA
RLLAVICKARVSTARLLQNKTEDCGKGLSALLRASTDNNGLAVFQPLEDEEKAAMPLISH
LTHLVRQSKPKHQEMVEFPRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQ
RQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQ
EYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAE
DEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRKRKKKAEEI
AEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEV
APRSDSEESDSDYEEEDEEEESSRQDTEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEY
SMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILAD
EMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPA
MRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNT
HYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEE
ETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLT
DGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRAS
GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL
KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV
RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEE
EDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDA
EVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRR
RNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPGN
SQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEK
DVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDDSNEEEEEEDEEESE
SEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDD
E
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagaccctggcgcgatgccccatccagggccctcgccagggcccgga
ccctctcctggaccaattcttggacctagtccaggacccggaccatccccaggttctgtc
cacagtatgatggggccgagtcccggacctcccagtgtctcacaccctatgccaacaatg
gggtctgccgacttcccgcaggaaggcatacatcaaatgcataagcccatcgatggtatg
cacgacaaggggattgtagaagatatccattgtggatccatgaagggcaccggtatgcgg
ccaccgcacccaggcatgggtcctccccagagtccgatggatcaacacagccaaggctac
atgtcgccgcacccgtctccgctgggagccccagagcacgtctccagtcctatgtcgggg
ggcggcccgaccccaccccagatgccgcccagccagccggggcccctcctgtcgggcgat
ccgcaggcgatgagccagcccaacagaggtccctcgcctttcagccccgtccagctgcat
cagctgcgagctcagattttagcttacaaaatgctggcccgcggccagcccctccccgaa
acgctgcagcttgcagtgcaggggaaaaggacgttgcccggcatgcagcagccgcagccg
cagccccagccgccctcgcagccccagccgcaggcacagcagccgcagcagcaggccctt
gttaactacaacagaccatctgatgagaaaaccaaggcacaacttgctcaggcttacgcc
accagtaggtgggtcaatcagccagataagaatgtctttggacttaatggattaaagaag
tctagtctggtcattaaggaaaaatgtgtgcccctttcagctcacatcagaggactggcc
aggctgctggctgttatttgcaaggcaagggtttcaacagcaaggctgctgcagaacaag
accgaggactgtggcaaaggcctctcagctctgctaagagcatccacagacaataatggg
ctggctgtgttccaacctttagaagatgaagaaaaagcagctatgcctctgatttctcac
ttgacccatttggtcagacaaagtaagcccaaacaccaagagatggttgaatttccgaga
ctccaggctcgcatagctcataggatccaagaactggaaaatctgcctggctctctgcca
ccagatttacgaaccaaagcaactgtggagctgaaagcgcttcgcttactcaatttccag
cgtcagctgagacaagaggtggtggcctgcatgcgacgagacacaaccctggagacggcc
ctcaactccaaagcatacaaacggagcaagcgccagaccctgagggaggcccgcatgacg
gagaaactggagaagcagcagaagattgagcaggaaaggaagcgtcgacagaagcaccag
gagtacctgaacagtattttgcagcatgcaaaagattttaaggaataccatcggtctgtg
gccgggaagatccagaagctgtccaaagcagtggcaacttggcacgccaacacggaaaga
gagcagaaaaaagagacggagcgtatcgaaaaggagagaatgcgaagactgatggctgaa
gatgaagagggctacagaaaactgattgatcaaaagaaagacaggcgtttagcttacctt
ttgcagcagactgatgagtatgtggccaacctgaccaacctggtttgggagcacaagcaa
gcccaggccgccaaagagaagaagaagaggaggaagaggaagaagaaggccgaagagatt
gccgagggaggagagtctgccctgggaccagacggagagcccatagatgaaagcagtcag
atgagtgacctccctgtcaaagtgactcacacagaaactggcaaggtcctgtttggacca
gaagcacccaaagcaagtcagctggacgcctggttggagatgaatcctggttacgaagtc
gccccccgatccgacagtgaagagagtgattctgattacgaggaggaggatgaagaggag
gagtccagtcggcaggacacggaagagaaaatacttctggatccaaacagtgaagaggtt
tctgagaaggatgccaagcagatcattgagacagcgaagcaagacgtggatgatgagtac
agcatgcagtacagtgccaggggctcccagtcctactacacggtggcccatgccatctcg
gagagggtggagaagcagtccgccctcctcatcaatgggaccctgaagcattatcagctc
cagggcctggaatggatggtttccctgtataataacaatttgaacgggatcttagctgat
gaaatggggctaggaaagaccatacagaccattgccctcatcacttatctgatggagcac
aaaagactcaatggcccctatctcatcattgttcccctttcgactctgtctaactggaca
tatgaatttgacaaatgggctccttctgtggtgaaaatttcttacaagggcacccctgcc
atgcgtcgttcccttgtcccccagctgcggagtggcaaattcaacgtcctcttgactact
tatgagtacattatcaaagacaagcacattcttgcaaagattcggtggaaatacatgata
gtggatgaaggccaccgaatgaagaatcaccactgcaagctgactcaggtcttgaacact
cactatgtggcccccagaaggatcctgttgaccgggaccccactgcagaataagctcccg
gaactctgggccctccttaacttcctcctccccacgatttttaagagctgcagcacgttt
gaacagtggtttaatgctccatttgccatgactggagaaagggtggacttgaatgaagaa
gaaactatattgatcatcaggcgcctgcacaaggtgttgagaccatttttattgaggagg
ctgaagaaagaagttgaatcccagctgccagaaaaagttgaatatgtgatcaagtgtgac
atgtcagccctgcagaagattctctatcgccatatgcaagccaaagggatcctcctcaca
gatggttccgagaaggataagaaggggaaaggaggtgccaagacacttatgaacactatt
atgcagttgaggaaaatctgcaaccacccgtatatgttccagcacatcgaggaatccttt
gctgaacacctgggctattcaaatggggtcatcaatggggctgagctgtatcgggcctca
ggaaagtttgagcttcttgatcgtattctgcccaaactgcgagctactaatcaccgcgtg
ctgcttttctgccagatgacctcgctcatgaccatcatggaggattactttgcttttcgg
aacttcctctaccttcgccttgacggcaccaccaagtctgaggaccgcgccgctctgctg
aagaaattcaacgaacctgggtcccagtatttcatcttcttgctgagcaccagagctggc
ggcctgggcttgaaccttcaggcagctgatactgtggtcatctttgacagtgactggaat
cctcaccaggatctacaagcacaagaccgagctcaccgcatcggccagcagaacgaggtc
cgggtgctgaggctgtgcactgtcaacagcgtggaggaaaagattctcgcggccgcgaaa
tacaagctgaacgtggatcagaaagtgatccaggcgggtatgtttgatcagaagtcttca
agccacgagcggagggcattcctgcaggccatcctggagcacgaagaggaaaacgaggaa
gaagatgaagtgcccgacgatgagaccctgaaccaaatgattgctcgacgagaggaagaa
tttgatctttttatgcgcatggacatggaccgacggagggaagatgccaggaacccaaag
cgtaagccccgcttgatggaggaagatgagctgccctcctggattattaaggatgatgct
gaagttgaacggctcacatgtgaggaagaggaggagaaaatatttggtaggggttctcgc
cagcgccgggacgtggactacagcgacgccctcacggagaagcagtggctgagggccatc
gaagacggcaatttggaagaaatggaagaggaggtacggctcaagaagcggaaaagacga
agaaatgtggataaagatcccgccaaagaagacgtggaaaaagctaagaagagaagaggc
cgccctccagctgagaaactatcccccaatccccccaaactgaccaagcagatgaacgca
atcatcgataccgtaataaactacaaagacaggtgtaacgtggagaaggtgcccggtaat
tctcagttggaaatagaaggaaacagttcagggcggcagctcagtgaagtcttcattcag
ttaccttcaagaaaagagttaccagaatactatgaattaattaggaagccggtggatttc
aaaaaaataaaggagaggattcgtaatcacaaataccggagcctgggtgacctggagaaa
gatgtcatgcttctctgtcacaacgctcagacgttcaacttggagggatctcagatctat
gaagactcgatcgtcttacagtctgtgtttaagagcgctcggcagaaaattgccaaagag
gaagagagtgaggacgacagcaacgaggaggaggaggaggaagatgaagaggagtccgag
tcagaggcaaaatccgtcaaggtgaaaatcaagctcaataaaaaagacgagaaaggccgg
gacaaaggcaaaggcaagaaaaggccgaatcgaggaaaagccaagcccgtagtgagtgat
ttcgacagcgatgaggagcaggaggaaaacgaacagtcagaagcaagcgggactgacgat
gagtga
DBGET
integrated database retrieval system
