Puma concolor (puma): 112868603
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Entry
112868603 CDS
T08890
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pcoo
Puma concolor (puma)
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoo04131
]
112868603 (VPS13A)
Membrane trafficking [BR:
pcoo04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112868603 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
112868603
NCBI-ProteinID:
XP_025787365
UniProt:
A0A6P6IGM5
LinkDB
All DBs
Position
Unknown
AA seq
3172 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVALKNLEIKENALSQLDVPFKVKVG
HIGNLNLTIPWKNLYTQPVEAVLEDIYLLIVPSSQIKYDPVKEEKQLLEAKQYELKRIEE
AKQKVADQEKHQVEKPDTFTEKLITQIIKNLQVKISNIHIRYEDDITNRDNPLSFGISLQ
NLSMQTTDQFWIPCLHDETEKLFRKLIRLDNLFAYWNVKSQLFYLNDYDESLDSLRNGIV
NKNIVPEGYDFVFRPISANAKLQMNRRSDFDFSAPKINLEVELHEIAIEFNKPQYFSIME
LLESVDMMTQNLPYRKFKPDVPLHCHAREWWTYAIHGILEVNVCPRLRMWSWKYIREHRQ
KMKQYKELYKKKITTKKPTGELLLSLQELEKILDVFNITISRQQAEVEVKKAGYRIYREG
AKDSEDNKGWFSWLWTWSEPRSKEQPDVKPGILEEMLTPEEKVLLYEAIGYSETAVDPTL
PKTFEAMKFFVHLKSMSIVLREKRETPELLDIVVEEFSTLIVQRPGAQAIKFETKIDSFH
VTGLPDNSTKPHLLSSLDDATSLFQIIFEINPLDETAAQRCIIEAEPLEMIYDARTVNSI
VEFFRPPKEVNLAQLTSATLIKLEEFRDKTATGLLYIIETQKVLDLKIDLKASYVIIPQD
GIFSPTSNLLILDLGHLKVTSKSRLELPDMKQGGARLEEIMHRAYDSFDVQLTSIQLLYS
TVGDNWKEARKLNVSTQHILIPMHFNVELAKAMVFMDIRMPKFKIFGKLPLISLRISDKK
LQGILELIESIPKPTPATETYAPVKPFQIQRSTSLGTSQISQKVLPLLELPCVEDDSEEE
FFDALCSPLEEPPQSPTGVKSCQQKKFQKPDYTKNMIQYKIRFEVPEVLIQFYHLVGDCE
LPVVEIDVLGLGTDVELRTFDLKANAFLKEFCLKCPEYFDENKKPVYLITTLDNTMEDLL
TLEYVKAEKNLPNLKSTYNNVVQLIKVNFSSLDIHLHTEALLNTINYFNNVLPQLEEKRA
SVSVAETEDKGEVIKKMSLKLPKNEDIITLQILAELSCLQIFIQDQKRNISEIKIEGLDS
EIIMRTSATEINAKLRNIIVLDSDKTALYKKAVYITGKEVFSFKMVSFVDATAGSAYTDM
NVVDVQVTLTVGCIEVVFVTKFLCSILAFIDNFQAAKQALAEATVQAAGMAATGVKELAQ
RSSRMSLDVNIKAPVVVIPQSPVSENVFVADFGLITMTNTFHIIKESQSNPPPIIDLITI
RLSEMRLYRSQFIDDTYQEVLDLLLPLNLEVIVERNLSWEWYQEVPCFNVNAQLKPMEFI
LSQEDLTTIFKTLHGNVWYEEGYGASPAGVKDEHSITSGASNASHHLEGTTVVTAAVVEI
HSQASQVKTTLNMSFKTDYLTMVLYSPSPEQTSFTDVRDPALKLAEFKLENIISTAKMYT
DDSVFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVKYRKVRDGLVTDLVLQ
EMYICASVEFLLTVANVFLEAFTTGTAIETSVQTWTAKEEVPVQEKEKWEVNIIIKNPEI
VFVADMTRSDAPALVITTQCEICWKGDRENSTMTAAIKDLQVRACPFLPVKRKGRITTVL
QPCDLFYQATQISANPQVIDISVKSLTLKVSPVIINTVITITSALYTSKETIPEDTASST
AHLWEKKDTKSLKMWFLEEPNEVENKAPTTELILRGEIIRVNIDSVFIVLEAGVGHRTVP
MLLAKSRFSGEGKNWSSLINLYCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNLG
IKMKKKAKMAIVESDTEEENYKVPEYKTVISFHSKDQLNITLSKCGLVMLNNLAKAFTEA
ATGASAVIIRDLAPFMILNSLGLPVSVSPSDSFSVLNVPLARSYVLKNEESLSMDYVGTK
DNDHFNAMTSLSSKLFFILLTPTNHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQVDG
VEGSKKVTIRSPVQIKNHFSIPLSVYEGDTLLGTASPGSEFNIPLTSYRSPLSLKPEDED
YEVCERIDFEEIIKNEGTLLKKICRSINPAKKPFIINVVPEKDNLASLSVYSEDGWDLPY
IMHLWPPILLRNLLPYKIAYYIEGIEHRVYTLNEGQSAHICTAQLDKARLHLKLLDYLNH
DWKSEYCIKPNQQDISFINFTCVTEIEKTDLDIAIHVTYNIGQTIVAFHSPYWMVNKTGR
MLQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAV
KCKGLKMEYQVGVTIDLSSFNITRIVTFTPFYMIENKSKYHISVAEEGNDKWLSLDLEQC
IPFWPEDASNALLVQVERNQGPPKKIHFNKQENCILLRLDDELGGVIAEVNLAEHSTVIR
FSDYHDGAATFLLINHTKSDIVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRKLKWRCG
KSHGEVTQKDDMMTPINLGKKTIYLVSFFEGLQRIILFTEDPRVFKATYESEKAELAEQE
IVLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSIKHTEKLEKEFKE
YTESSPSEDKVIELDTNIPVRFTPSGTNMKILQPHVIAIRRNYLPALKVEYSTSAHQSSF
RIQIYRIQIQNQIHGAIFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKY
FKVLIQEMDLRLDLGFVYALAELMTEAEVTEKTEVELFHKDIEAFQEEYKTASLVDSSQV
SLYEYFHISPIKLHLSVSLRSGREEAKDSEKQEGLMAVHSLNLLLKSIGATLTDVQDVVF
KLAFFQLNYQFHTASELQSEVIRHYSKQAIKQMYVLILGLEVLGNPFGLIREFSEGVEAF
FYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITNAMAKGVAAMTMDEDYQQ
KRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLV
GAVARPTGGIIDMASSTFQGIKRATESSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQML
QVMENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFTKEPFI
VHGRRLRIEAKERVKSVFHAKEFGKIINFKTPEDARWILTKLEEAREPSPRF
NT seq
9519 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggatgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcactctgggcatctggggaggagctgtggccttgaagaat
cttgaaattaaagaaaatgctctgagtcaactggatgtaccatttaaagttaaagttggt
catataggtaatcttaatcttacaattccatggaaaaacctgtatactcaaccagttgaa
gctgtcctggaagacatttatttactcatagtaccttcttctcaaataaaatacgatcct
gtaaaagaagaaaaacaactcttggaggcaaagcaatatgaactgaagcgaatagaagaa
gcaaaacaaaaagtagctgatcaagaaaaacatcaggtggagaaaccggacactttcaca
gaaaaattaattactcagatcataaaaaatcttcaagtgaaaatttccaacatccatatt
cgttatgaagatgatatcacaaatcgagacaatccgttgtcatttggtatttcccttcaa
aatctcagcatgcagacaactgatcaattctggattccatgtttacatgatgaaactgag
aaactctttcgtaagttaatccgattggataacctttttgcctattggaatgtgaagtct
cagttgttttaccttaatgattatgatgaatcattggacagcttgaggaatggtattgtc
aataaaaatattgttccagaaggttatgattttgtgtttcgccccatatctgctaatgcc
aaacttcagatgaatcggcgatcggattttgacttctctgcacccaagataaacctagaa
gttgagttacatgagatagcaattgaatttaataaaccacagtatttcagcattatggag
cttcttgagtcagttgatatgatgacgcaaaatctgccatataggaaattcaaacctgat
gtacctcttcactgtcatgccagagaatggtggacttatgctatacatggtattctggaa
gtaaatgtctgcccccggttacggatgtggtcatggaagtatattagagaacacaggcaa
aaaatgaagcagtataaagaactgtataaaaaaaagataacaactaaaaagccaactggt
gaacttctcctctctttgcaggagttggaaaagatcttggatgtatttaatataactata
tcaagacaacaggcagaagttgaggtaaagaaagctggatacaggatttacagagaagga
gcaaaagattcggaggataataaaggatggtttagctggctgtggacttggtcagaacca
agaagtaaagaacagccagatgttaagcctggaattcttgaagaaatgttgacacctgaa
gaaaaagttttactctatgaagcaattggctacagtgaaaccgcagttgatccaaccttg
cctaaaacatttgaagccatgaagttttttgttcacttgaaaagtatgtctattgttcta
agagaaaaacgagaaacacctgaactgttagatattgtagtggaagaatttagcactttg
atcgtgcaaagaccaggagcacaagcaattaaatttgaaaccaaaattgattcgtttcat
gtcactggcttaccagataattcaacaaaacctcacctcctttcttccttggatgatgct
acgtcactcttccaaattatatttgagataaatccgttagatgaaactgctgctcaaagg
tgtatcatagaagctgaacctttagaaatgatatatgatgcgagaacggtgaatagtata
gtggaatttttcagacctccaaaagaggtaaatctagcacagctcacttcagcaactttg
attaaacttgaagaatttcgtgacaagacagcaacaggtctactatatattattgaaaca
cagaaagttcttgatctcaaaattgatttgaaggcttcatatgttattatcccacaggat
ggaatttttagccctacatcaaatctacttattttggatcttggtcatctaaaggtgaca
agtaaaagtcgtttggagttaccagatatgaaacaaggtggggccagacttgaagagata
atgcatagagcttatgattcctttgatgttcagcttacaagcatacagctgctttacagc
acagttggtgataattggaaagaagctcgaaaacttaatgtatctacacaacatattttg
atacctatgcacttcaatgtggaacttgctaaggccatggtttttatggatataaggatg
cccaaattcaagatatttggaaagttaccactgatttctttacgaatctcagataaaaaa
ctgcaagggattttggaattgatcgaaagcattccgaaacccacacctgcaactgaaaca
tatgcccctgtcaaaccatttcagattcaaaggtcaacttctttgggaacatcacagatt
tcacagaaagtgcttcctctcctggaacttccatgtgtcgaagatgattcagaggaagaa
ttttttgacgcactgtgtagtcccttggaagagcctcctcagtctcccactggagttaaa
agttgtcaacagaaaaagtttcaaaagccagattatacaaaaaatatgattcagtataaa
ataagatttgaagtgccagaggttttgattcagttttatcaccttgttggagattgtgaa
ctacctgtggtagaaattgatgttttaggactgggcacagatgttgagcttagaacattt
gatttgaaagcaaatgcctttttgaaagagttctgcttaaaatgcccagaatactttgat
gaaaacaagaaaccagtttatttgattacaacgctggataatacgatggaagatctgcta
acactggagtatgtgaaggcagaaaagaatctacctaatttgaaaagtacttacaacaat
gttgtgcaactaattaaggtgaatttttcctctttggatattcatttacatactgaagca
cttctgaatacaataaactattttaataacgtactcccacaactagaagaaaaacgagcc
tctgtgtctgttgcggagactgaagacaaaggagaggtcattaaaaaaatgtctttaaaa
ctacccaagaacgaagatattattaccttgcagattttggcagaattatcttgtttacag
atctttattcaagatcagaaacgtaacatttctgaaattaagattgaagggcttgattct
gagataataatgaggacttcagccactgaaataaatgcaaagctaaggaatataatagtc
ttggattctgataaaacagctttatacaaaaaggccgtttacatcactggaaaagaagtt
ttcagcttcaaaatggtctcttttgtggatgcaactgctggttctgcatacacagatatg
aacgtggttgacgttcaagttactttaactgttggttgcattgaagtagtttttgtcaca
aaatttctatgttctatattggcttttatagataattttcaagcggctaaacaagctttg
gctgaggctactgttcaggcagcaggaatggcggctactggtgtaaaagaactggcacag
aggagttctagaatgtcgttggatgttaacatcaaagccccagtggtggtcatcccacag
tctccagtttctgaaaatgtttttgttgctgattttggactaattacaatgacaaataca
ttccatataataaaagagagccagagcaaccccccacccattattgatttgataacaata
aggctgagtgaaatgcgactatacaggtctcaatttattgatgatacataccaggaagta
ctggatctgctactgccattaaatcttgaggtgattgttgagcgaaatttatcttgggaa
tggtaccaggaggttccttgttttaatgtaaatgctcagctaaagcccatggagttcatt
cttagtcaagaagatttaacaactatttttaagacattacatggtaatgtatggtatgaa
gaaggttatggtgcctcacctgcaggagtaaaagatgaacatagtattactagtggagct
agtaatgcttcacaccatttagaaggaacaactgtagtgacagctgctgtggtagaaata
cattcacaggcctctcaagttaagacaacgctaaatatgagtttcaaaactgattatctc
accatggtactctatagtccaagtcctgagcagacttcctttacagatgttcgtgatcct
gctctgaaacttgctgaatttaagttggagaatattataagcactgcaaagatgtataca
gatgactcagtattttcttccttctcattaaaaaactgtattttagatgataaaagacct
catgtcaagaaggcaactcctagaatgataggactgacagttgggtttgacaaaaaggac
atgatggatgtaaagtataggaaagtcagagatggtttggtgactgatttagtccttcaa
gaaatgtatatttgtgccagtgtagaatttctgctgacagttgcaaacgtctttcttgag
gccttcaccacaggcacggctatagaaaccagtgttcaaacatggactgctaaggaagaa
gtacctgtacaggaaaaagagaagtgggaagttaatattattattaaaaatcctgaaatt
gtgtttgtggctgatatgacacgaagtgatgctcctgccttagtcattacaacacaatgt
gaaatttgttggaaaggtgaccgtgagaacagtacaatgactgctgccattaaagatctt
caagtgagagcatgcccatttcttccagtcaagagaaaaggcagaatcactacggttttg
cagccctgtgacttattctatcaagctactcaaataagtgcaaatccacaagtgattgat
atatcagtaaaatccttgacactgaaggtttcaccagttatcataaatactgtgattacc
ataacgtcagcactttatacatctaaggaaaccatccccgaggatactgcttcttctaca
gcacatttatgggaaaagaaggatactaagagtttaaaaatgtggtttcttgaagaacca
aatgaagttgaaaacaaagctcccacaactgaattgattctcagaggagagatcataaga
gtgaacattgattctgtttttatagttcttgaggctggagttggtcacagaacagtgcct
atgctgttagcaaagtcacgtttttcgggggaaggcaaaaactggagttccttgataaat
ctatactgtcagcttgaattagaagtccattattacaatgaaatgtttggtgtatgggag
cctttgcttgaacctttagaaattgatcagactgaggattttagaccatggaatcttgga
atcaagatgaaaaagaaagcaaaaatggctattgttgagtcagatactgaagaagaaaat
tacaaagtgccagaatataaaactgttatcagtttccattcaaaagaccagctaaacatt
acgttatccaaatgcggccttgtaatgttaaataatttagccaaggcatttacagaagcc
gccactggagcttcagctgtcatcatacgggatctagcgccatttatgattttaaattct
cttggacttccggtctctgtttcaccaagtgattcttttagtgtactcaatgttccattg
gcaagatcctatgtattgaaaaatgaagagagtttaagtatggattatgtgggaactaaa
gacaatgatcatttcaatgcaatgaccagcctaagcagtaaactcttctttattcttctt
acacccactaaccactctactgctgataagattcctttaacaaaagtgggacgacgacta
tacaccgtaagacacagagagtctggggttgaaagatctattgtttgtcaagtcgatgga
gtggaaggaagtaagaaggtaacaattcgttctccagtgcagattaaaaatcatttttca
attccactttctgtttatgaaggggacactttattgggaacagcttcacctggaagtgaa
ttcaacataccattaacatcttaccgatcacctctttctctgaagccagaagatgaggac
tatgaagtgtgtgaaagaattgactttgaagaaattataaaaaatgaaggcactcttcta
aagaagatatgtagatctataaaccctgctaagaaaccatttattattaatgttgtccca
gaaaaagataatttggcatctctctccgtgtattcagaagatggttgggacttaccatac
ataatgcatttgtggccgcctatcctcctccgaaatcttcttccttacaaaattgcttat
tatatagaggggattgaacacagagtttatactctaaatgaaggacagtcagcccatatt
tgtactgcgcagttggataaagccagactacatttaaaattacttgactatcttaatcat
gattggaaaagtgaatattgtataaaacctaatcagcaagatattagtttcatcaatttc
acctgtgttacagaaatagaaaagactgatttagatattgctatccatgtaacttacaat
attggccagaccattgtggcatttcatagtccttattggatggtcaataaaactggtcga
atgttacagtataaagcagatggaattcatcgaaagcatccacctaattacaaaaagccc
gttcttttttcttttcaaccaaagcatttttttaataacaataaggttcagcttatggta
actgatagtgaattgtcagatcagttttcaattgatactgttgggagtcatggagctgtt
aaatgtaaaggcctgaaaatggagtatcaagttggtgtcactatagacctcagcagtttt
aacattaccagaattgtgacttttacccctttttatatgattgaaaacaaaagcaaatac
catatatcggtggctgaagagggaaatgataaatggctctctcttgatttagagcagtgt
attcccttttggcctgaggatgcttctaatgcactgcttgttcaagttgaaagaaatcaa
ggccctcccaaaaagatacattttaacaagcaagaaaattgtattttattgcggctggat
gatgagcttggaggtgttatagcagaggttaatttggctgaacattctacagttattaga
ttttcagattatcatgatggagcagctacattcctgttaataaatcacaccaagagtgac
attgttcagtacaaccaaagttctctcagtgaaatagaagattccctccctcctggaaaa
gcagtattttatacatgggctgatccagtgggctctagaaagctgaagtggagatgtgga
aaaagccacggtgaagtaacacaaaaggatgatatgatgacacctataaatttggggaaa
aagaccatttatttagtttcattctttgaaggcttacagcgcattattttattcactgaa
gatccaagggtatttaaagcaacatatgaaagtgagaaagcagagttagcggagcaagaa
attgtgttggccttacaagatgttggaatttccctcgtcaacaattacacaaagcaagaa
gtagcctatattggcattacaagttctgatgtggtttgggagacaaagcccaagaagaag
gcaagatggaagccaatgagtataaagcacactgagaagttagaaaaagaatttaaggaa
tatactgaatcttcaccttcagaagataaggttattgagttggacactaacattccggtt
cgcttcacacctagtggcactaacatgaaaattctgcaaccacatgtaatagccatacga
agaaattatcttccagcattaaaagtagaatatagcacatctgcacatcagtcatcattt
agaattcaaatttacagaatacagatccaaaaccagatacatggtgctatatttcctttt
gtgttttatccgattaaacctcccaagtcggtcaccatggattcagctccaaaacccttc
acagatgtcagtattgttatgagatctgcaggccattcccagatttcacgtattaagtac
ttcaaggtgttgatccaagaaatggatctcaggttagatcttgggtttgtctatgcttta
gcagaacttatgacagaagcagaagtgactgaaaaaacagaggttgaactttttcataaa
gatatagaagctttccaagaagaatataaaacagcttcattagtagattcatcacaagtc
agtctctatgaatactttcatatatctcccatcaagttgcacttaagtgtttcactgcgt
tcgggtagagaagaagctaaagattcagaaaaacaggaaggactgatggcggttcattcc
ttaaatcttctgctgaagagtattggtgcgactcttacagatgtacaagatgtagttttt
aagcttgcattttttcaactcaactatcagttccatacagcatctgaactacaatctgaa
gtaataagacactattcaaaacaggccattaagcaaatgtacgtactcattcttgggctt
gaagttttgggaaatccctttggcttgattagagaattttctgaaggtgtggaagcattt
ttttatgaaccttaccagggagccatccagggtcctgaagagtttgtggagggcatggcc
ctaggactgaaggcactagttggtggagctgtcggtggattagctggtgctgcctctaaa
atcaccaatgctatggcgaaaggggtggcagctatgactatggatgaagactaccaacag
aagagaagagaagccatgaataagcaaccagcgggtcttagagaaggcattactcgtgga
ggaaaaggcttagtttctggttttgtaagtggcataacaggaattgttacaaaaccaatc
aaaggagctcaaaaagaaggagcagctggtttcttcaaaggtgttgggaaaggtttagtt
ggagcagtggcaaggccaactggaggcatcatagacatggctagcagtacatttcaggga
ataaaaagagctacagagagttctgatgaagtggagagcctgcgaccccctcgattcttt
aatgaggatggagttatcagaccttacaggttgagggatgggactggcaaccaaatgtta
caggtcatggaaaatggaagatttgcaaaatacaagtattttacccatgtcatgatcaac
aaaacagatatgttaatgataactaaaagcggtgtcttgtttgtaacaaaaggaacattt
ggacagcttacatgtgagtggcagtatagttttgatgagtttaccaaagagcccttcatt
gttcatgggagaagattacgcattgaagcaaaggaacgagtgaagtctgtatttcatgcc
aaagagtttggaaaaataattaacttcaagaccccagaagatgctaggtggatcctcacg
aaactagaagaagcaagagaaccttccccgagattctga
DBGET
integrated database retrieval system
