Puma concolor (puma): 112868880
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Entry
112868880 CDS
T08890
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
KO
K11138
telomere-associated protein RIF1
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
112868880 (RIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcoo03032
]
112868880 (RIF1)
DNA replication proteins [BR:
pcoo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
112868880 (RIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rif1_N
NICE-1
Motif
Other DBs
NCBI-GeneID:
112868880
NCBI-ProteinID:
XP_025787658
UniProt:
A0A6P6IL60
LinkDB
All DBs
Position
Unknown
AA seq
2479 aa
AA seq
DB search
MTAPGASPLAPLLETLEDPSAPLGEQTDAYLTLTSRMTGEDGKEVIMEIERKLSRLFRVL
KIHISSQNSDLSSAALQALGFCLYNPKITSGLSDTDIEELLLKLNDSVKSSDKNVRTRAL
WVISKQTFSTEIIGKVVSTIIDSLEIVFNRGELHSAVVDYEALNVIIRLIEQAPVQMGEE
SIRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLLSELQKL
FMSKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGAPMIKKIAFIAWKSL
IDNFALNPEILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISIDSNALPQGSSSRVATSPGLNPMTPIHKGASPYGTPVTPRMNLSSNFGGM
ATIPSIQLLGLEMLLHFLLGPEVLSFAKQNKLVLSLEPLEHPLISSSSFFSKHASTLITA
VHDSFVAVGKDASEAVVNAIWKELISLMKSIIESGNKKERPGSEVLTLLLKSLESIVKSE
VFPVSKTLVLMEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFNNNLLEYGVED
ERFFLNLETLVGCVLSGPTSPLAFSDSVLNVINQNAKLLENKEHLWRMWSIIVTPLTELI
NQTNEVNQGDALEHNFSAIYGALTLPINHIFSVQKFPVATMKTLLRTWSELYRAFARCAA
LVATAEENLCCEELSSKIVSSLEDAGFSNLLLLDRIIHIITVMVDCIDFSPYNIKYQPKV
KSPQRPSDWSKKKKEPLGKLASLFKLIVKVIYSFHTLSFKEVHSDTLLTVGNSVTSILSK
VLGRISLPSMIRKIFATLSRPLALFYENSKLDEVPKVYSCMSNKLEKLLGEIITCLHFSY
TGTYDSELLEQISPLLCIIFLHKNKQIRKQSAQFWNATFAKVTMLTYPEELKPILRQAKQ
KFLLFLPGLENVEFMEESSGPYSDGTENSQLNMKISGMERKSSGKRDSFLAQTKDAKENM
KPPGQLKLESPSPKTKSEMPLEEEKSVDFVFIPSEGKEAKERILTEHQKEVLKTKRCDIP
AMYNNLDVSQDTLFSQYTHEESLEVPTLTEKSKEDSKVIFKEEQMESDIVIPQDVTENCG
MDEHPEKGSLSNNESGSIEETSPDILSSNNDARKKALISSTKTPTECASSAENTFGVNSS
SVSNVIISGTPPQPTSRRQTFITLEKFDGSENRPFSASPLNNMSSTVTVKNNQENMSKTD
IPSKTKKREIALVKSDSEKIVHGIKRSSRKSSKGEQTGNKRSKLLMRSEQEKNTQESVDG
MVALENNQPGLLNQTECMLDNNHTHLSESAVEYEDMVLKPTIENAVLLENSTVEDKTLGI
NLESKENTPPTVTPADQIVDEDSTIQITPSQKTLRRSSRRRSEIAEPTTDSQEKENNQKK
ERRKEEEKPLQKSPLQVKDDLLLKQKLISEQTVQENVEKGTNLHEKTFGETSTNAEIDES
KRKLDLENIKSEGDGAQDIAEKSSEKPVSGRTRYQTRRASQGLLSSIENSESDSSEAKEE
GSKKKRSGKWKNKSSDSVDIEDQEEKVVKQECINIENQTLDCKANSDVDRDIKSQICEQK
DESSVTLEDSTVSSDLLQVSDDVSNTYEGKIKTNKCAEYSFSNPSVPESNLRTRNASKRL
QKRDSVENNSVGESSKIGTSDMSLLSEKSSQTLECQHKRSRRVRRSKSCECCGEKSQPQE
KSLIGLKNMENYDVKVTETKKTDMQTAVPVSETSKVNLYSEVKLSDEHHAVNFHLGLKEE
NDTVNDSLVLSETEFKKDTVQNPLPSEVVNFEQETCDTNSAEATSLESQGPSNKKCKTVG
PSLDDSRDNSLEYSTLEINKEKPEAVLEKELTIENIASVETNACEAEAIFNPEVVEAVEL
DTESDQSEAGLSEQKDAKTVVFEEEVMEINSERCDNSEAEAAEEPNAEETVTKEFNSGIG
YSDDTTPVKVSAQAEIPEQTAVGELDEGSDDSSPNSSEEMNAKMENYEETVISEVNAEAD
QVSETEDGDLTTKISTKLVQANTKTLTMGIDSFVFNTLEMSIEEGKVDSNKTEANIELSK
SEETLDDNQMVEGNDEILQEVHPTSEKVEETSQSLTSETAISELITEDNNASPQKLRELD
PLLLSANGSPSGMQTRCVWSPLASPSTSILKRGLKRPHEDEISSPVHKVRRVSFADPIYQ
AGLADDIDRRCSIVRSHSSNNSPTVKSVKTSLTQSKHNATSTKGFLSSGSRSPKFKSSKK
CLITEMAKEPVPCPAESVYPALVNCVAPVDIILPQITSNIWARGLGQLIRAKNIKTIGDL
STLTASEIKTLPIRSPKVSNVKKALRIYHEQQVKSRGLEEVPVFDISEKTINGIQTKSLP
SDEERLASDLIDPVALETSLPKNLMAQISALAVQLDSEDLHNYSGSQLFEMHEKLGSMAN
SIIKNLQSRWRSPAHENSI
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccgggtgcaagccccctggcgccgctgttggagactttggaagacccttcc
gccccccttggagagcagaccgacgcttacctgactctgaccagtcgaatgactggagaa
gatggaaaagaagtcattatggaaattgagagaaaactttctcggctattcagagtttta
aaaattcacatttccagtcaaaactcagacctcagtagtgctgctctacaggccttgggg
ttttgtttgtataatcccaaaattacctcaggattatcagacacagatattgaagaactg
cttttaaaattgaatgatagtgttaagagctcagacaaaaatgtacgtactagggcactt
tgggtgatatccaagcagacgttttccactgaaatcattggcaaagtagtatccactata
attgattcattagaaatagtatttaatagaggagagctgcattctgctgttgttgattat
gaagcattaaatgtcatcataaggctaattgaacaagccccagttcaaatgggagaagag
tcaattaggtgggcaaaactggtcataccgttagtggttcattcagcccaaaaggtacat
ttgagaggagcaactgctttagagatgggaatgccgttgttgcttcaaaaacaacaagaa
atagcatctatcacagagcagcttatgactactaaattactttcagaactccaaaagcta
tttatgagtaagaatgagacttacgtgttaaaattgtggcctttgtttgtcaaacttctt
gggaagaccttgcatcgaagtgggagtttcattaattctctattacagctggaagaacta
ggatttcgtagtggagcacccatgattaaaaaaatagcatttattgcctggaagagttta
atagataattttgctttgaatccagaaatattatgcagtgcgaaaagactgaagttgtta
atgcagcctttgagttccatccacgtgagaacagaaactctagcactaacaaaactagaa
gtctggtggtatttactaatgagacttggacctcatcttcctgctaattttgaacaggtg
tgcgtgcctctgattcagagtacaataagcatcgattctaatgctttacctcaaggcagt
tcatctcgtgtagctacttctcccggtttaaatcccatgactcctatacacaaaggtgct
tccccatatggaactcctgtaactcctcggatgaacttaagttcaaattttggtggaatg
gccacaatcccctctattcaacttttgggacttgaaatgctgcttcattttttgttgggt
ccagaagtcttgagttttgctaagcaaaacaaacttgtactgagcttagagccactcgaa
catccattaatcagcagctcttcttttttttccaaacatgcaagtacgcttatcactgct
gttcatgatagctttgttgcggttggaaaagatgcttctgaggcagttgtcaatgctatt
tggaaggaactaattagcttgatgaaatcaatcattgaatcaggtaacaaaaaagagaga
ccaggttctgaagttttgaccctcttactaaaatcgttagaaagcatagtaaagtcagaa
gtatttcctgtatcaaaaacattggtcctcatggaaattacaattaaaggactgccccag
aaagtattaggttcaccagcatatcaggttgctaatatggatattcttaatgggactcct
gctttgttcttaattcagttaattttcaacaataatctcctggaatatggtgtagaagat
gaaaggttttttctcaatctggaaacacttgtaggctgtgtcctttctggaccaacttca
ccactagctttcagtgactctgttttaaatgttattaatcaaaatgcaaagctgttggaa
aacaaggagcatctctggagaatgtggagtattatagtcaccccactaactgaattgatt
aatcagaccaatgaagtgaatcaaggtgatgccttagaacataactttagtgccatatat
ggtgcattgactttaccaataaaccatatattttcagtacagaaatttccagtggctacc
atgaagaccttacttagaacttggtcagaattatatagagcatttgcccgctgtgctgct
ttggtggcaactgcagaagagaatttgtgctgtgaggaactttcttccaagattgtgtcc
agtttagaagatgcaggcttttcaaatttgttgctcttagataggatcattcatattatt
actgtaatggttgattgcattgacttctcaccatataatattaaatatcagccaaaagta
aaatcaccacagagaccttcagattggtccaaaaagaagaaagaacctttagggaaattg
gcttctttatttaaacttattgtgaaagtgatctactctttccatactctgagcttcaag
gaagtacattctgatactctcctcactgttggcaactcagtcaccagtattctttccaaa
gtacttggacgtatttctttgccttctatgatccgaaaaatatttgcaactttatcaaga
cctctggcattattttatgaaaactcaaagcttgatgaagttcctaaagtgtatagttgt
atgagcaacaagttagaaaagctattaggagagataattacttgtctgcacttcagctac
actggaacttatgacagcgaacttcttgaacagatctctccgttattatgcataatattt
ttgcacaagaataaacagattcgaaaacagagcgctcagttctggaatgccacatttgct
aaagtgacgatgttgacttatcctgaagagttaaaaccaatattaagacaagccaaacag
aaatttctgctcttcttgcctggtttggaaaatgttgaatttatggaggaatccagtggc
ccatactcagatggaacagagaattcacagttaaatatgaagataagtggcatggaaaga
aaatcaagtggaaaaagagattcttttttggcacaaacaaaggatgcgaaagaaaatatg
aaaccaccaggccaattgaaattagagtcgccttctccaaaaacaaagagtgaaatgcct
ttggaagaagaaaagtctgtcgactttgtgtttataccttccgaaggaaaagaagcaaag
gaaagaatactaactgaacatcagaaagaagtactcaaaacaaagaggtgcgatattcct
gccatgtataataacctggatgtttcacaggatactttgttttctcagtatactcatgaa
gagtctttggaagttcctactttaactgaaaaatcaaaggaagattccaaggtgatattt
aaggaggaacaaatggagagtgacattgtcattcctcaagatgtcacagaaaactgtggt
atggatgaacatcctgaaaagggttccctttcaaataatgagagtggttctattgaagaa
accagcccagacatactgagcagtaataatgatgccagaaagaaagctttaatttcatca
acgaaaacaccaactgaatgtgcatctagtgcagaaaatacttttggtgtcaacagtagc
tcagtttctaatgtcatcatttctggaactcccccacagcctacaagtcggaggcaaact
tttattactttggagaagtttgatggttcagaaaatagaccttttagtgcatctccctta
aataatatgtcatcaactgttacagtgaaaaataaccaggaaaacatgagtaaaacagat
attccatcaaaaacaaagaaaagggaaatagctcttgtaaaatctgactctgaaaaaata
gtgcatggaattaagagatcaagccgaaagtcaagtaaaggtgaacaaactgggaataaa
aggtctaagctcttaatgagatctgagcaggagaaaaatactcaggaatctgttgatgga
atggtagccttagaaaataaccaacctggtttgcttaatcagacagaatgtatgttagat
aataaccatactcatctctctgaatctgcagtggagtatgaggatatggtgcttaagcca
acaatagaaaatgcagtgttattagaaaacagtactgtagaagacaaaacattaggaatt
aatttagaatccaaagaaaatacacccccaactgtaacaccagcagatcaaatagtagat
gaggatagtactattcagataactccaagccagaaaacccttagacgatcgtcaaggcga
cgttcagaaatagcagagcccaccactgacagccaagagaaagaaaataatcaaaaaaaa
gagagacgtaaagaagaagaaaaacctcttcagaagagcccattgcaggtaaaagatgac
ttgttacttaagcaaaaactgatttctgaacaaactgtgcaggaaaatgtagagaaagga
actaacttacatgagaagacttttggggaaaccagcactaatgctgaaattgatgaaagt
aaaagaaagctagaccttgagaatattaaatctgagggcgacggtgctcaggacattgca
gaaaagtcctctgaaaaaccagtaagtggacgaacacggtatcaaacaagaagagcatcc
caaggtttactatccagcattgaaaactcagaatctgatagttctgaggcaaaagaagaa
ggttctaaaaagaagagatctggaaaatggaaaaacaaaagcagcgatagtgttgacatt
gaagatcaagaagagaaagtggtaaaacaagaatgtataaacattgaaaaccagacactt
gattgtaaagcaaattctgacgtagacagagacataaaatctcagatttgtgaacaaaaa
gatgagagtagtgtaactcttgaagattctacagtatcttcagatttattgcaggtttct
gatgacgtatcaaatacttatgagggaaaaatcaaaaccaacaagtgtgcagaatattct
ttttcaaacccatcagtgccagaatcaaatctcaggactagaaatgccagtaagagatta
caaaaacgagattctgtagaaaataacagtgtgggagaatcttcaaaaatagggacatca
gacatgtctttgctttctgaaaaatcttctcaaacacttgaatgccaacataagagaagt
aggagggtaaggcgatctaaaagttgtgagtgctgtggagaaaaatcacaacctcaggaa
aagtcactcattgggttaaagaatatggaaaattacgatgtaaaggtcactgaaacaaaa
aagacagacatgcaaacagctgtacctgtatcagaaacttctaaagttaatctgtactcg
gaggtaaaactttcagatgagcatcatgctgtgaattttcatttgggtctcaaggaggag
aatgatactgttaatgattcgttagtcctatctgagactgagttcaaaaaagatactgtc
caaaaccctcttccttccgaagtagtgaattttgaacaagaaacttgtgatacgaattct
gcagaagcaacatctcttgagagccaagggccgtccaataaaaagtgtaaaactgttggc
ccatctttagatgattccagagataattcactggaatattctactttggagattaacaaa
gaaaagccagaggctgtcctggagaaggaactaacaatagagaacattgccagtgttgaa
acaaatgcatgtgaagctgaagcaatatttaatccagaagtagtagaagctgttgaattg
gatacagaaagtgatcaatctgaagcaggcttatctgaacaaaaggatgccaaaactgtt
gtttttgaagaagaggtaatggagataaacagtgaaagatgtgataactctgaagcagag
gcagctgaagaaccgaatgccgaagaaacagtaactaaagaatttaattctggtattggt
tattctgatgataccacacctgtaaaagtgagtgctcaggcagagatacctgaacaaaca
gcagttggggaattagatgaaggaagtgatgattctagtccaaactcatctgaagaaatg
aatgctaaaatggaaaattatgaagagacagtgattagtgaggtaaatgctgaagctgac
caagtcagtgaaacagaggatggggacttgactactaaaatatctactaagcttgtacag
gccaatacaaagacattgactatgggaatcgacagctttgttttcaatacacttgagatg
agtattgaagaaggaaaggtggactctaataaaactgaagcaaatattgaacttagtaag
tctgaagaaacattagatgacaatcaaatggtagaagggaatgatgaaattttacaagaa
gttcaccctacttcagagaaagtggaggaaacctcacagtctctgacatccgaaacagcc
atctccgaactaataacagaagacaataatgcatctcctcaaaaattaagggaacttgat
cctttacttctatcagcaaatggcagtcctagtggcatgcagacacgctgtgtctggtct
cctttggcttctccatccaccagcattttaaagagaggattaaaaagaccacatgaagat
gagatatcatcacctgttcacaaggttcgccgtgtctcctttgcagatccaatttaccaa
gcaggattggcagatgacattgataggcgatgctctatcgttagatcccattcttcaaat
aattctcccacagtaaaaagtgttaaaacttcacttacacaatctaagcataatgccact
tcaaccaaaggatttctgtcctcaggatcacgtagccctaaatttaagagctcaaagaag
tgtttaattacagaaatggctaaagaacctgtgccatgtccagcagaaagtgtttaccca
gctttggtgaactgtgtggctccagttgatatcattttacctcagattacatcaaatata
tgggcaagaggactgggacagctcattagagctaagaatataaaaacaattggtgatttg
agtactcttacagcatctgaaataaaaactcttcctatccgttctccaaaagtgtccaat
gtaaaaaaggctctcagaatttatcatgagcaacaggtaaagtctcgtggactagaagag
gtaccagtttttgatatttctgaaaaaacaataaatggaatacaaactaaatctctccct
tctgatgaagaaagacttgcctcagatttaattgatcctgttgctttagaaacttcatta
cctaaaaatcttatggcacagattagtgcacttgctgttcaactggattcagaagatctc
cataattattcaggaagccagctgtttgaaatgcatgagaaacttggtagcatggcaaac
tcaataataaaaaatttgcagtcacgctggaggtcaccagcccatgaaaattccatttag
DBGET
integrated database retrieval system
