Puma concolor (puma): 112868928
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Entry
112868928 CDS
T08890
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo04140
Autophagy - animal
pcoo04148
Efferocytosis
pcoo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112868928 (VPS16)
04148 Efferocytosis
112868928 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112868928 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoo04131
]
112868928 (VPS16)
Membrane trafficking [BR:
pcoo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112868928 (VPS16)
Hops complex
112868928 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
112868928
NCBI-ProteinID:
XP_025787711
UniProt:
A0A6P6IHN8
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA
SVRPVLEIYSASGLPLASLLWKSGTVVSLGWSAEEELLCVQEDGGVLVYGLHGDFRRHFS
MGNEVLQNRILDARIFHTEFGSGVAILTGAHRFILSANVSDLKLRRMPEVPGLQGAPTCW
TALCQDRVAHILLAVGPDLYLLDQSACSAVTPFGLAPGVSSFLQMAVSFTYRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHRPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAIRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGRFLDLSLHDTVTTLILGGHNKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAELSLVLSHCTGATDGATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggcgaactggaacccgctcggggactctgccttttaccggaaatat
gagctgtacagcatggactgggacctgaaggaggaactcagggattgcctggtagctgct
gcgccctacgggggccccattgcactgttgaggaacccgtggcggaaggagaaggctgcc
agcgtacggccagtgcttgagatctattctgcttccggcctgcctctggccagtctgctg
tggaagagtgggaccgtggtgtccctaggctggtcagctgaagaggagctgctctgcgtg
caggaggatggtggagttctggtatacgggcttcacggtgacttccggagacacttcagc
atgggcaatgaggtgctccagaaccggattctggacgcccggatcttccatactgagttt
ggttcaggcgtggccatcctcaccggggcccaccgctttattctcagtgccaatgtcagt
gacctcaaactccgccggatgccagaggtgccaggtctgcagggtgcacctacgtgctgg
accgccctctgccaggaccgagttgcacacattcttctggctgtggggcctgatctttac
ctcctggaccagtccgcctgctccgcagtgacaccttttggcctggcgccaggagtgagc
agcttcctgcagatggccgtctccttcacctaccgacacttggcactcttcacggacaca
ggctacatctggatggggacagcatcactcaaggagaagctgtgtgagttcaactgtaac
atccgggcccccccgaagcagatggtctggtgtagccgccctcgcagcaaagagagggcc
gttgtggtggcctgggagaggcggctaatggtggtgggtgatgcgcctgagagcatccag
tttgtgctggacgaagactcctatttggttcctgagctggatggggtccgcatcttctct
cgtagcacccacgagttcctacatgaggttccagtggccagcgaggagatcttcaaaatt
gcctcgatggcccctggagcgctgttgttggaggcccagaaagagtatgagaaagagagc
cagaaggcagatgagtacctacgggagatccaggagctggggcagctgacccaggccgtg
cagcagtgcatcgaggccgcgggacatgagcaccggccagacatgcagaagagcctgctc
agggcggcctcctttgggaagtgtttcctcgacagatttccacctgacagcttcgtgcgc
atgtgtcaggacctgcgtgtgctcaatgccattcgggattatcacatcgggatccccctc
acttatagccaatataagcagctcaccatccaggtgctgctggacaggcttgtgttgcgg
aggctttaccccctggcgatccagatttgtgagtacctgcgccttcccgaagtgcagggc
gtcagcaggatcctggcccactgggcctgctacaaggtgcaacagaaggacgtgtccgac
gaggatgttgctcgggccattaaccagaagctgggggatacgcctggcgtctcttactct
gacattgctgcgcgggcctatggctgtggccgcacagagctggccatcaagctgctggag
tatgagccacgctctggggagcaggtaccccttctcctaaagatgaagaggagcaaactg
gcgctgagcaaggccattgagagtggggacactgatctggtgttcacggtgttgctgcac
ctgaagaatgagctaaatcgaggagattttttcatgactcttcggaaccagcccatggcc
ctgagtttgtaccgacagttctgtaaacatcaggagctagagacgctgaaggacctctac
aatcaggatgacaaccaccaggagctgggcagcttccacatccgagccagctatgctgca
gaggagcgtatcgaggggcgggttgcagctttgcagacagcagctgacgccttctacaaa
gccaagaacgagtttgcagccaaggccacagaggatcaaatgaggctcctacggctgcag
cgacgcctagaagatgagttggggggccggttcctggacttgtctctacacgacacggtc
actaccctcatccttggaggccacaacaagcgcgcagagcagctggcacgtgacttccgc
attcctgacaagaggctctggtggctgaagctgactgccctggccgatctggaagactgg
gaggagctagagaagttttcaaagagcaagaaatcacccattggctacctgccctttgtt
gagatctgcatgaagcaacacaacaaatatgaggccaagaagtatgcctcccgtgtgggt
ccggagcagaaggtcaaggccttgcttctcgttggggatgtggctcaggccgcagatgtg
gccatcgagcacaggaatgaagcagagctgagccttgtattatcccactgcactggagcc
acagatggggccacggctgacaaaattcagcgggctagggcacaagcccagaagaagtga
DBGET
integrated database retrieval system
