Puma concolor (puma): 112869448
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Entry
112869448 CDS
T08890
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo02010
ABC transporters
pcoo04148
Efferocytosis
pcoo04975
Fat digestion and absorption
pcoo04979
Cholesterol metabolism
pcoo05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112869448 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112869448 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
112869448 (ABCA1)
04979 Cholesterol metabolism
112869448 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
112869448 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoo02000
]
112869448 (ABCA1)
Transporters [BR:
pcoo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
112869448 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
GCIP_N
Motif
Other DBs
NCBI-GeneID:
112869448
NCBI-ProteinID:
XP_025788402
UniProt:
A0A6P6IJZ1
LinkDB
All DBs
Position
Unknown
AA seq
2260 aa
AA seq
DB search
MAYWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDAQRLLLYSQKDT
SMKDMHQVLRTLQQIENYNSSLKLQDFLVDNETFSGFLTYNLSLPRPTVDKMLGADVSLH
KVFLQGYQLHLTNLCSGSKLEEVIQLGDQEVSMLCGLPREKLDAAEQVLRSNVDILKPIL
TELNYTSPVLSKELTKATKTLLDSLGTLAQELFSMSSWSDMRQEVMFLTSVNSSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEEDAGTFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLIGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELS
PKIWTFMESNPEMDLVRTLLGSRSNDHFWEQQLDGLDWTAKDILAFLAKHPEDVQSANGS
VYTWREAFNETNQAIQTISRFMECVNLNKLEPIATEVRLINKSMELLDERKFWAGIVFTG
ITPGSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFMLYLPYVLCVAWQDYVGFTLKIFVS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPMEEDGFNLTTSVSMMLFDTFIYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSSQKGISEICMEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRFEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMKRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVAEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRNRRAFGDKQSCLRPFTEDDVIDPNDSDVDPESRETDLLSGMDGKGSYQVK
GWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYNEQYTFVSNDAPEDMGTQELLNALTRNPGFGTRCMEGNPIPDMPCSVGEEEWTTAP
VPQTITKLFQSGNWTMENPSPACQCSSDKIKKMLPVCPLGAGGLPPQRKQNTADILQNLT
GRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSHSLPSSQEVNNAIKQVKKH
LKLAKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVMNNAILRANLQKG
ENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERV
SKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALL
LLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIND
ILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGV
VFFLITVLIQYRFFIRPRPVNARLPPLNDEDEDVKRERQRILDGGGQNDILEIKELTKIY
RRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSNI
HEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEKY
AGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLTS
HSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFGL
AFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFA
KDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6783 nt
NT seq
+upstream
nt +downstream
nt
atggcttactggccacagttgaggttgctgctgtggaagaacctcactttcagaagaaga
caaacatgtcagctgttgctggaagtggcctggcccctatttatcttcctgatcctgatc
tctgttcggctgagctacccaccctatgaacaacatgaatgccactttccaaacaaagcc
atgccctctgcaggaacgcttccttgggttcaggggattatctgtaatgccaataaccct
tgtttccgttatccgactcctggtgaggcccctggagttgttggaaactttaacaaatcc
attgtgtctcgcctgttctcagatgctcagcggcttcttttatacagtcagaaagacacc
agcatgaaggacatgcaccaagttctaaggacattacagcagattgagaattacaactca
agcttgaagcttcaggatttcctagtggacaatgaaaccttctctggattcctgacttac
aacctctctctgccaaggcctactgtggacaaaatgctgggggctgatgtcagtctccac
aaggtatttttgcaaggctaccagttacatttgaccaatctgtgcagtggatcaaaatta
gaagaggtgattcaacttggtgaccaagaagtttccatgctgtgcggcttgccaagggag
aaactggatgcagcagagcaagtacttcgttccaatgtggacatcctgaagccgatcctg
acagaactaaactatacatctcctgtcctgagcaaggaactgactaaggccacaaaaact
ttgctggatagtcttgggactctggcccaagagctgtttagcatgagcagctggagtgac
atgcggcaggaggtgatgttcctgaccagtgtgaacagctccagctcctccacccagatc
taccaggctgtgtcccgcattgtgtgtggccatccagagggtgggggcctgaagatcaag
tccctcaactggtacgaggacaacaactacaaagccctctttggaggcaacggcactgag
gaagatgctggcaccttttatgacaattctacaaccccttattgcaatgatttgatgaag
aatctggagtccagtcctctttcccgcatcatatggaaagctctaaagcctctgcttatt
gggaagatcctatatacacctgacactccagccacaaggcaggtgatggctgaggtgaat
aagacctttcaggaactggctgtgtttcatgatttggaaggcatgtgggaagagctcagc
cctaagatctggaccttcatggagagtaacccagaaatggaccttgttcggacactgttg
ggcagcagaagcaatgaccacttttgggaacagcaattagatggcttagattggaccgct
aaagacatcctggcatttttggccaagcacccagaggatgtccagtctgccaatggctct
gtatacacctggagagaagccttcaatgagaccaaccaggcaattcagaccatctctcgt
ttcatggagtgtgtcaacctgaacaagctcgaaccgatagcaacagaagtccggctcatc
aacaagtccatggagctgctggatgagagaaagttctgggctgggatcgtgttcaccgga
atcactcctggcagtgttgagctgccccatcatgtcaagtacaagatccgaatggatatt
gacaatgtggagaggacaaataaaatcaaagatgggtactgggacccaggtcctcgggct
gacccctttgaggatatgcggtacgtctgggggggctttgcctacttgcaagatgtggtg
gaacaggcaatcatcagggtgctgactggcactgagaagaaaactggtgtttatgtgcag
cagatgccgtacccctgttatgtcgatgacatcttcctgcgggtgatgagccggtcgatg
cctctgttcatgacgctggcctggatctactccgtggctgtgatcatcaagggcatcgtg
tatgagaaggaggcgcggctgaaggagaccatgcgcatcatgggcctggacaatggcatc
ctctggttcagctggttcatcagcagcctcattcctttgctcgtgagcgccggcctgctg
gtggtcatcctaaaattaggaaacctgctgccctacagcgaccccagcgtggtgtttgtc
tttctgtcggtgtttgctgtggtgaccatcctgcagtgcttcctgatcagcacactcttc
tccagagccaacctggcggcagcctgcgggggcatcatctacttcatgctctacctgccc
tatgtcctgtgcgtggcgtggcaagactatgtgggcttcacgctcaagatcttcgtgagc
ctgctgtctcctgtggcttttgggtttggctgtgaatacttcgccctttttgaggagcag
ggcattggggtgcagtgggacaacctgtttgagagccccatggaggaagatggcttcaac
ctcaccacgtcagtctccatgatgctgttcgacacctttatctatggagtgatgacgtgg
tacatcgaggctgtctttccaggccagtatggaatacccaggccctggtattttccttgc
accaaatcctactggttcggtgaggaaagcgatgagaagagccaccctggttccagccag
aagggaatatcagaaatttgcatggaggaggaacccacacacctgaagctgggcgtgtcc
attcagaacttgatgaaggtttaccgagatggcatgaaggtggctgttgatggcctggcc
ttgaatttctatgagggccagattacctccttcctgggccacaatggagctgggaagacc
accaccatgtcaatcctgacggggttgttccctcccacctcgggcactgcctacatcctg
ggaaaagacattcgctttgagatgagcaccatccggcagaacctgggggtctgtccccag
cacaatgtgctgtttgacatgctgactgtggaagaacacatctggttctatgcacgtcta
aaggggctctcagagaagcatgtgaaagcagagatggagcaaatggccctggatgttggt
ttgcctcccagtaaactgaaaagcaaaacgagtcagctctcaggtggaatgaagagaaag
ctgtctgtggctttggcctttgttgggggatccaaggttgtcattctggatgagcccaca
gctggtgtggacccttactcccgcaggggaatatgggagctactgctgaaatatcgacaa
ggccggaccattattctttccacacaccacatggatgaagcagacatcctgggggacagg
attgccatcatttcccatgggaagctgtgctgtgtgggctcctccctgtttctcaagaac
cagctgggaacaggctactacctgaccctggtcaagaaagatgtggaatcctccctcagt
tcctgcagaaatagcagtagcactgtgtcatacctgaagaaggaggacagtgtttctcag
agcagttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgatgta
tccgctatctccaacctcatcaggaagcatgtggctgaggcccggctagtggaagacatt
gggcatgagctgacttatgtgctgccctatgaagctgcaaaagagggggcctttgtggaa
ctcttccatgagattgatgaccggctctcagacctgggcatctctagttatggcatctca
gagactacgctggaagaaatatttctcaaagtggctgaagagagtggggtggatgctgag
acttcagatggcaccttgccagcaagacgaaacagacgggcctttggggacaagcaaagc
tgtcttcgcccattcactgaagatgatgtcattgatcctaatgattctgatgtagaccca
gaatccagagagacagacctgctcagcgggatggacggcaaaggctcctaccaggtgaag
ggctggaaactcacacagcagcagtttgtggcccttctgtggaagaggctgctgattgcc
agacggagtcggaagggattctttgctcagattgtcctgccagctgtgtttgtctgcatt
gccctggtgttcagcttgatcgtgccaccctttggcaagtaccccagcctggagcttcag
ccctggatgtacaacgaacagtacacatttgtcagtaatgatgctcctgaggacatgggc
acccaggaactcttgaatgccctcaccagaaaccctggcttcgggacccgctgtatggaa
ggaaacccaatcccagacatgccttgctcagtgggggaagaggagtggaccaccgccccg
gttccccaaaccatcacgaaactcttccaaagtggcaactggacgatggagaacccctca
cctgcctgccagtgtagcagcgacaaaatcaagaagatgctgcctgtgtgtcccctgggg
gcaggggggctgcctccacaaaggaaacagaacactgcagacatccttcagaacctgacg
ggaagaaacatttcggattatcttgtgaagacctatgtgcagatcatagccaaaagttta
aagaacaagatctgggtgaatgagtttaggtacggagggttttctctgggtgccagtaat
tctcattcacttccttcaagtcaagaagttaataatgccatcaagcaagtgaagaaacac
ttgaagctggccaaggacagttctgcagatcgatttctcagcagcttgggaagattcatg
acaggactagacacgaaaaataacgtcaaggtgtggttcaacaacaagggctggcatgcc
atcagttctttcttgaatgtcatgaacaatgccatcctccgggccaacctgcagaaggga
gagaaccccagccagtatgggattaccgctttcaatcaccctctgaatctcactaagcag
cagctctcagaagtggctctgatgactacatcagtggatgtccttgtgtccatctgtgtc
atctttgcaatgtccttcgtcccggccagctttgtggtgttcctgatccaagagcgggtc
agcaaagcaaaacacctgcagttcatcagtggagtgaagcctgtcatctattggctctcc
aattttgtgtgggatatgtgcaactatgtggtccctgccacgctggtcattatcatcttc
atctgcttccagcagaagtcttacgtgtcctctaccaacctgcctgtgctagcccttcta
ctcttgctgtatgggtggtcgatcacacctctcatgtacccagcctccttcgtgttcaag
atccccagcacagcctacgtggtcctcaccagcgtgaacctcttcattgggatcaacggc
agcgtggccacttttgtgctggagctattcaccaacaataaactgaataacatcaatgat
atcctgaagtctgtattcttgattttcccacatttttgcctgggacgggggctcatcgac
atggtgaaaaatcaggcaatggctgatgccctggaaaggtttggggagaatcgttttgtt
tcaccactgtcttgggacttagtgggacgaaacctcttcgccatggctgtggaaggggtg
gtattcttcctcatcactgttctgatccagtacagattcttcatcaggcccagacctgta
aatgcaaggcttcctccgttgaatgatgaggatgaagatgtgaagcgggaaagacagaga
attcttgatggtggaggacagaatgacatcttggaaatcaaggagctgacaaagatctac
agaagaaagaggaagcccgctgttgacaggatttgcgttggcattcctcctggcgagtgc
tttggacttctgggagttaatggggctgggaaatcatcaactttcaagatgttaactgga
gataccacggttaccagaggagatgctttccttaacaaaaatagtatcttatcaaacatc
cacgaagtgcatcagaacatgggctattgccctcagtttgatgccatcacggagttactg
actggaagagagcacgtggagttctttgccctcttgagaggagtcccagagaaagaagtt
gggaaggttggtgaatgggcaattcgaaaactgggcctcgtgaagtatggagaaaaatat
gctggtaactatagtggaggcaacaaacggaagctctcaacagccatggctttgattggc
gggcctcctgtagtgtttctggatgaacctaccacaggcatggatcccaaagcccggaga
ttcctatggaattgtgccttaagtattgtcaaggaagggagatcagtagtgcttacatct
catagtatggaagaatgtgaagcgctgtgcactaggatggcaattatggtgaatgggagg
ttccggtgtcttggcagtgtccagcatctgaaaaataggtttggagatggttatacaata
gttgtacgaatagcagggtccaaccctgatctgaagcctgtccaggagttctttggactt
gcctttccaggaagtgttctcaaagagaagcaccggaacatgctccagtaccagcttcca
tcctcattatcttccctggctaggatattcagcatcctttcccagagcaaaaagcgactc
catatagaagactactctgtttctcagacaacacttgaccaagtatttgtaaacttcgcc
aaggaccaaagtgatgatgaccacttaaaggacttgtcattacacaaaaaccagacagta
gtggatgttgcagttctcacatcttttctccaggatgagaaagtgaaagaaagttatgta
tga
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integrated database retrieval system
