Puma concolor (puma): 112870827
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Entry
112870827 CDS
T08890
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo04151
PI3K-Akt signaling pathway
pcoo04382
Cornified envelope formation
pcoo04510
Focal adhesion
pcoo04512
ECM-receptor interaction
pcoo04518
Integrin signaling
pcoo04820
Cytoskeleton in muscle cells
pcoo04926
Relaxin signaling pathway
pcoo04933
AGE-RAGE signaling pathway in diabetic complications
pcoo04974
Protein digestion and absorption
pcoo05146
Amoebiasis
pcoo05165
Human papillomavirus infection
pcoo05200
Pathways in cancer
pcoo05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112870827 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112870827 (COL4A5)
04518 Integrin signaling
112870827 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112870827 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112870827 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
112870827 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
112870827 (COL4A5)
09158 Development and regeneration
04382 Cornified envelope formation
112870827 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112870827 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
112870827 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
112870827 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
112870827 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
112870827 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcoo04147
]
112870827 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
pcoo00536
]
112870827 (COL4A5)
Exosome [BR:
pcoo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112870827 (COL4A5)
Glycosaminoglycan binding proteins [BR:
pcoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112870827 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
112870827
NCBI-ProteinID:
XP_025789666
UniProt:
A0A6P6IN32
LinkDB
All DBs
Position
Unknown
AA seq
1691 aa
AA seq
DB search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NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcgtggaatcagcctggctgccggcttgttcttactggccctcagtctttgg
gggcagcctgcagaggctgcggcttgctatggttgttctccaggatcaaaatgtgactgt
agtggtgtaaaaggagaaaagggggagagagggtttccaggtttggaaggccatccaggt
ttgcctggatttccaggtccagaagggcctccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccacgatggagccccaggacctcaaggt
atcccaggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggacctcctgggatcccaggtatgaagggagaaccaggtagt
ataattatgtcatcgctgccaggaccaaagggtaatccaggatatccaggtcctcctgga
atacaaggcccagctggtcccactggtttaccagggccaattggtcccccaggaccacca
ggtttgatgggccctcctggtccaccaggacttccaggaccaaaggggaatatgggctta
aatttccaaggacccaagggtgaaaagggtgagcaaggccttcagggcccccctgggcca
cctggacagatcagtgaacagaaaagaccaattgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacctccagggatacgtggtcctccgggtcct
ccaggtggtgtgaaaggtgagaaaggtgagcaaggagagcctggcaaaagaggtaaacca
ggcaaagatggagagaatgggcagccaggaattccaggtttacctggtgatcctggttcc
cctggtgaaccaggaagggatggagaaaagggccaaaaaggtgacattggcccaactggg
cctcctggacttgtaatccctaggcctgagactggtgtaactgtgggagaaaaaggaagc
attggtttacctggcttgcctggagaaaaaggagagcgaggatttcctggaatacagggt
ccacccggcctccctggacctccagggactgcagttatgggtcctcctggcccccctggc
tttcctggagaaaggggccagaaaggtgatgaaggtccacctggactttctattcctgga
tctcccggacttgatggacagcctggggctcctggacttccagggcctcctggccctcct
ggccctcaaatccctcctagtgatgatatatgtgaagcaggccctccaggccctccagga
tctccaggtgatagaggactccaaggagaacaaggagtgaaaggtgacaaaggtgatacc
tgcttcaactgtattggaactggtatttcagggcctccaggtcaacctggtctgccaggt
cttccaggtcctccaggatctcttggtttccctggacagaagggagaaaaaggacatgct
ggtccaaccggtcccaaaggattaacaggcataccgggagttccaggtcctccaggcttt
cctggatctaaaggtgaacctggtgacatcctcacttttccaggaatgaagggtgacaaa
ggagagttgggttcccctggagcccccgggcttcctggtttacccggtacccctggacag
gatggactaccagggcttcctggccccaaaggagaacctggtggaattgcttttaagggt
gaaagaggcccccctgggaatccaggcttgccaggtctcccagggaatagggggcctatg
ggccctgtgggttttggccctccaggcccaataggtgaaaaaggcatacaaggtgtggca
ggaaatccaggccagccaggaataccaggtcctaaaggtgatccaggtcagaccataacc
caacccgggaagcctggtctgcctggtaacccaggaagagatggtgaagtaggtcttcca
ggtgaccctggacttcccggccagccaggcttgccaggaatacctggtagcaaaggagaa
ccaggtatccctggaattgggcttcctggaccacctggtcccaaaggttttcctggaatt
ccaggacctccaggagcacctgggacacctggaagaattggtctagaaggcccttctggg
ccaccaggctttccaggaccaaagggagaaccaggacttgggctacctgggccacctggg
cccccaggactcccaggtttcaaaggaacacttggtccaaaaggggatcgtggtttccca
ggacctccaggtcctccagggcgtgctggcttggatgggcttcctggaccaaaaggtgat
attgggccaaatggacaacctgggccaatgggacctcctgggcttccagggataggtgtt
cagggaccaccagggccaccagggattcctggaccagtaggccaacctggcttacatgga
ataccaggagagaagggagatccaggacctcctgggtttgatgttctaggaccccctggt
gagagaggcagtccaggaattcctggagcacctggtcctatgggacccccaggatcacca
gggattccaggaaaaggaggtgcctctggatttccaggtgccaaaggtgaaatgggtatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtgttcctggt
ctcaaaggtgataatggtttgcagggtcagccaggacctcctggccctgtaggagaaaaa
ggtggtaaaggagagcctggccttccaggccctcctggaccaatggatccagatctgctg
ggctcaaaaggagagaagggggaccctggattaccaggtattcctggagtttcaggacca
aaaggttaccagggtttgcctggagacccagggcaacctggactgagtggacaacctgga
ttaccaggaccatcaggtcccaaaggtaaccctggtctccctgggaagccaggacttaca
ggacctcctggacttaaaggaagcattggtgatatgggttttccaggccctcagggtgtg
aaagggtctcctggacctcctggagttcctggacaacctggctccccaggattacctgga
cagaaaggagaaaaaggtgatcctggtatttcaggcattggtcttccaggtcttcctggc
ccaaagggtgaacctggtctgcccggatatccaggaaacccgggaatcaaaggttctatg
ggagatactggtttgcctggattaccagggacccctggagcaaaaggacatccaggcctt
cctggattccctggaaccccaggacttcctggaccaaaaggtattagtggtcctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggtggcggtcgtcctgggccacca
gggcctccaggtgaaaaaggcagtccgggtcaagatggtatccctggcccagctggacag
aagggtgaaccaggtcaaccaggctttggaatcccaggaccccctggacttccaggactt
tctggtcaaaagggtgatggaggattacctggcattccaggaaaccctggacttcctggt
ccaaagggagaaccaggctttcagggttttcctggtgtgcagggtcctccaggccctcct
ggttctccaggtccagctctggaaggccctaaaggcgaccctgggccccaaggtcctcct
gggagaccaggtcctacaggttttcaaggtctaccaggtccagaaggtccccggggtctc
cctggaaatggaggtattaaaggagagagaggaaacccaggccaacctgggcaacctggt
ttgcctggtttgaaaggagatcaaggaccaccaggactccagggtaatcctggtcggcca
ggtctcaatggaatgaaaggagatcctggtctcccgggtgttccaggatttccaggcatg
aagggacccagtggaatacctggttcaactggccctgaaggggatccaggacttgttggc
cccccaggtccccctggattacctggtccttcaggacagagtattataatcaaaggagat
gttggtccaccagggatcccaggccagcctggattaaaaggtctaccaggactaccagga
cctcaaggcttaccaggcccaattggccctccaggaaatcctggacgcaacggactccca
ggctttgatggtgcaggagggcgcaaaggagacccaggtctgccaggccagccaggtacc
cgtggtttggatggtccccctggaccagatggattgcagggtcccccaggccccccagga
acctcctctattgcccatggattcctcatcacacgtcacagccagacaacagacgcacca
caatgcccacatggaactgtccagatttatgaaggcttttctctcttgtatgttcaagga
aataaaagagctcatggtcaagacttggggacggctggcagctgccttcgtcgcttcagt
accatgcctttcatgttctgcaacatcaataatgtttgcaactttgcttcaagaaatgac
tattcttactggctgtccaccccagagcccatgccaatgagcatggaacccctgaagggc
cagagcatccagccattcattagtcgatgtgcagtatgtgaagctccctccatggtgatt
gcagttcacagtcagaccatccagattccccactgtcctcagggatgggattctctctgg
attggctattccttcatgatgcacacaagcgcaggagcagagggctcaggtcaagccctg
gcctcccctggttcctgcttggaagagttccgttcagctcctttcattgaatgtcacggc
cggggtacctgcaattactatgccaactcctacagcttttggctagcaactgtagatatg
tcagacatgttcagcaaacctcagtcagaaacgctgaaagcaggagacttgaggacacga
attagccgatgtcaagtgtgcatgaagaggacataa
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integrated database retrieval system
