Puma concolor (puma): 112871440
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Entry
112871440 CDS
T08890
Symbol
DDX53
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD box protein 53
KO
K21869
ATP-dependent RNA helicase DDX53 [EC:
5.6.2.7
]
Organism
pcoo
Puma concolor (puma)
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcoo03036
]
112871440 (DDX53)
Enzymes [BR:
pcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112871440 (DDX53)
Chromosome and associated proteins [BR:
pcoo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
112871440 (DDX53)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
MOEP19
KH_2
KH-I_KHDC4-BBP
P-loop_SecA
HEM4
KH_DEAH11_2nd
Motif
Other DBs
NCBI-GeneID:
112871440
NCBI-ProteinID:
XP_025790277
UniProt:
A0A6P6IQ78
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MEEPNPRDFRAGRDDRGGASGGGGASGGGGGRGGGSGGGGSRGRGRSGRGRSCYVEVFGP
REPPLCFKLNNNMIGVVIGRGGSKIKDIQSTTSTKIQIMKGDSEAEVKIFGTKDMKAKAK
AAIETLIKKQERGYTSESSVDNAGPQPFVGRDFHTDTTGRQVQPLIEWDQVRAEVVEWEK
RKWADLPPIQENFYVESKATRSMSRVQVDMWRKENFDVMCDDLKDGEKRPIPNPICKFED
AFQPYPELMKNIRRAGFQNPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHLN
NQPVSREERHGPGMLVLAPTRELALQVEAECSKYSYKGLKSVCIYGGGNRDRQIRDITKG
VDIIVATPGRLNDLQMNKFVTLQSVTYLVLDEADKMLDLGFEHQIMKILLDVRPDRQTIM
TSATWPDTIRQLAQSYLKEPMIVYVVTLDLVAVNTVKQIVIVTTEEEKRSLIQEFLESLS
PQDKVLIFVSRKLVADDLSSDLGIQGIPVQSLHGDREQHDREQALEDFKXGQVKILIATD
LASRGLDVNDVTHVYNYDFPRNIEEYAHRVGRTGRAGKTDISITLTTQNDWKIATELIKI
LQRANQSVPKDLITMAEQYKLHKQKKDAGRKSKSREKPKESC
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcctaatccaagagatttcagagccggtcgggacgacagaggtggtgccagt
ggcggtggtggtgccagtggcggcggtggtggcagaggcggtggcagtggcggcggcggc
agcagaggcaggggcagaagcggcaggggcaggagctgctacgtggaggtcttcggcccc
cgagaaccacctctgtgctttaaattaaataacaacatgattggtgtggtaattggtcgt
ggtggatccaagataaaagacatccagagtacgaccagcaccaaaatacagatcatgaaa
ggcgattctgaagcagaggtgaaaatttttggtaccaaggatatgaaagcaaaggccaag
gcggctatagaaactctcattaaaaaacaagaacgaggctacacttcagaatccagtgtt
gataatgctggccctcagccctttgtgggacgagattttcacacagataccactggtaga
caagttcagccactgatagagtgggatcaggtcagggcagaagtcgtagagtgggaaaaa
agaaaatgggcagatttaccaccaattcaggaaaatttttatgtagaatccaaagcaaca
aggtcaatgtctcgagttcaggtagatatgtggagaaaggaaaattttgacgtaatgtgt
gatgacttgaaagatggtgaaaagcgtcccatccccaatcccatctgtaaatttgaggat
gctttccaaccctatcctgaacttatgaaaaacattagaagagctggttttcaaaaccca
acgccgattcagtcacaggcatggccaattattctacaaggaatcgatcttataggagtt
gcccaaacgggaacaggcaaaactttgtcctatttaatgcctgggtttattcatctcaat
aatcaaccagtatcgagagaggaaaggcatggacctggcatgctggtccttgcacccact
agagaattagctcttcaggtggaagctgaatgttctaagtattcatacaaaggtcttaaa
agtgtttgtatatatggtggtgggaatagagatcgacaaatacgagacattaccaaagga
gtagacatcattgttgcaactcctggacgactgaatgatctgcaaatgaataagtttgtc
accctacaaagcgtaacctacttagtcctagatgaagcagataaaatgctagatctgggg
tttgaacaccagataatgaagattttattagatgtgcgcccagaccgccagaccattatg
acaagtgcaacctggccagataccattcgtcaacttgctcaatcttatttgaaagagcct
atgattgtttatgttgtcactctggatctagttgctgtaaatacagtgaagcaaattgta
attgttaccacagaagaagaaaaacgatctcttatccaagaattcctagagagcctatca
ccccaagacaaagtcctcatcttcgtcagcagaaaacttgtcgctgatgacttatccagt
gatttaggcatacaaggtatccctgtacaatcactgcatggtgacagagaacaacatgat
cgtgaacaagcactagaggactttaaantcggacaagtgaaaatattgattgctaccgat
ttagcatccagaggtcttgatgttaatgatgtcacccatgtgtataattatgacttcccc
cgcaatatcgaagaatacgcacacagagtggggcgtactggaagagcagggaagactgac
atatcgattaccctcacaactcaaaatgattggaagattgccactgaattgattaaaatt
ctgcaacgagcaaatcaaagtgtccccaaagatcttataacaatggccgaacaatacaag
ttacataagcaaaaaaaggacgcaggaagaaaatcaaaatctcgtgaaaaacccaaggag
tcttgttga
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integrated database retrieval system
