Phocaeicola coprophilus: I6J50_01135
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Entry
I6J50_01135 CDS
T07209
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pcop
Phocaeicola coprophilus
Pathway
pcop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I6J50_01135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcop03400
]
I6J50_01135
Enzymes [BR:
pcop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
I6J50_01135
DNA repair and recombination proteins [BR:
pcop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I6J50_01135
Prokaryotic type
I6J50_01135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
QRO24939
LinkDB
All DBs
Position
complement(258636..259298)
Genome browser
AA seq
220 aa
AA seq
DB search
MNVQIEETWKEVLAPEFEKDYFIRLTDFVRQEYQTTTVYPPGKLIFNAFNLCPYNKVKVV
IIGQDPYHGPGQAHGLCFSVNDGVPFPPSLQNIFKEIHDDLGTPIPATGNLTRWAEQGVL
MLNATLTVRAHQAGSHQRKGWEEFTDAAIRALAEKRKHLVFILWGSYAQKKGAFIDRNKH
LVLTSVHPSPLSAYNGFFGNRHFSRANEYLIQHGETPIVW
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtacaaatagaagaaacctggaaagaagtacttgcccccgaattcgaaaaggat
tattttatccggttgactgatttcgtaagacaggaataccagacaaccacggtatatcct
ccaggcaaactgatattcaacgcttttaatctttgtccttacaataaagtaaaagtcgtt
atcatcggacaggatccttatcacggtccgggacaggctcatggtctctgtttctccgtg
aatgacggtgttccttttccgccctccctgcaaaacatattcaaagaaatccacgatgat
ctgggaacccctattccggctaccggaaatctgacccgatgggccgaacagggagtcctg
atgctcaatgctacactgacagtaagagctcatcaggccggctcacatcagcgcaaggga
tgggaagaattcacggatgcagccatccgggcacttgcagaaaagcggaaacacctggtc
ttcatcctgtggggatcatatgcacaaaagaaaggtgctttcattgaccggaacaaacac
ctggtactgacatctgtccacccctctcctctttcagcttacaacggcttcttcggcaac
cggcatttcagccgtgccaacgaatacctgatacagcatggggaaacacccatcgtatgg
taa
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