Phocaeicola coprophilus: I6J50_01330
Help
Entry
I6J50_01330 CDS
T07209
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pcop
Phocaeicola coprophilus
Pathway
pcop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
I6J50_01330 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcop01007
]
I6J50_01330 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcop03016
]
I6J50_01330 (lysS)
Enzymes [BR:
pcop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
I6J50_01330 (lysS)
Amino acid related enzymes [BR:
pcop01007
]
Aminoacyl-tRNA synthetase
Class II (A)
I6J50_01330 (lysS)
Transfer RNA biogenesis [BR:
pcop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
I6J50_01330 (lysS)
Prokaryotic type
Other AARSs
I6J50_01330 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF4332
Motif
Other DBs
NCBI-ProteinID:
QRO24973
LinkDB
All DBs
Position
complement(317359..319086)
Genome browser
AA seq
575 aa
AA seq
DB search
MNVLELSEQEIIRRNSLNEMRAMGIDPYPAAEYVTNAFSTDIKAEFKDDEAEPRKVSVAG
RIMSRRVMGKASFIELQDSKGRIQIYITRDDICPDENKDLYNVVFKRLLDLGDFIGIEGF
VFRTQMGEISIHAQKLTVLSKSIRPLPIVKYKDGVAYDKFEDPELRYRQRYVDLVVNDGV
KDIFLKRNKVYNSMREYFNSKGYIEVETPILQSIAGGAAARPFITHHNALDIPLYMRIAS
ELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNPEFTCMEIYVAYKDYNWMMKFTENMIEK
ICMDVNGTTEVKVGDNIINFKAPFKRVTMLDSIKEFTGYDLTGMNEEQIREVCQKLNMEI
DDTMGKGKLIDEIFGEFCEGNYIQPTFITDYPIEMSPLTKRHRNNPELTERFELMVNGKE
LCNAYSELNDPIDQLERFEEQMRLSEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRL
VMLMTGQSTIQEVLFFPQMRPEKVIPKDAPAKFMELGISEDWVPVIQKAGYNLVSDMKDV
NPQKLHQDICGINKKYKLELTNPSVDEVAGWIQKI
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtattagaactaagtgaacaggagattatcagacgtaacagtctgaatgaaatg
agagcgatgggcattgacccctaccctgctgccgagtatgtaaccaacgctttttcgact
gacattaaagccgaattcaaagatgacgaagcagaaccgcgcaaagtatccgtagcggga
cgtatcatgtcacgccgcgtcatgggtaaagcttctttcattgagttacaggattccaaa
ggtcgtattcagatttacatcacccgtgacgacatttgtccggatgaaaacaaggattta
tacaacgtagtatttaaacgcctgctcgacttgggagactttatcggcatcgaaggtttc
gtattccgcacacaaatgggagaaatctccatccatgcacagaagttaacggtattgtca
aaatcaatccgcccacttcctattgtgaaatataaagatggagtagcttacgacaaattc
gaagatccggaattgcgttaccgccaacgttatgttgacttagtcgttaacgatggagtt
aaagatattttcctgaaacgcaataaggtttataactccatgcgtgaatacttcaactcg
aaaggatatattgaagtagaaactccaattttgcaatccattgccggaggtgcagccgca
cggcctttcatcacacaccacaatgctttggatatacctttatatatgcgtattgccagt
gaactttacttgaaacgtctgatcgtaggtggattcgagggagtctatgaaattggcaag
aacttccgtaatgaaggtatggaccgtacacataatccggaatttacctgtatggaaatc
tacgtagcctataaggactacaactggatgatgaagtttacagaaaatatgattgaaaag
atttgtatggatgtaaacggtacaacggaagttaaagtgggagataatataatcaacttt
aaggcgccgttcaaacgtgtgaccatgctcgattccatcaaagaattcaccggatatgat
ttgactggcatgaatgaagaacaaatccgtgaagtatgccagaaattgaacatggaaatt
gatgatacaatgggaaaaggaaagctgatcgacgaaatcttcggagaattctgcgaagga
aactacattcagccgaccttcatcacagactatccgattgaaatgtccccgctgaccaaa
cgtcaccgcaataatccggaactgaccgaacgtttcgaattgatggttaacggtaaagaa
ctttgcaacgcttattcagagttaaatgaccccatcgatcagttggaacgtttcgaagaa
caaatgcgtctgagtgaaaagggagatgacgaagccatgatcatcgacaaagactttgtc
cgtgctttggaatacggtatgcctccgacttcaggtatgggtatcggaatggaccgtctg
gtaatgctgatgaccggacagagcacaattcaggaagttctgttcttccctcaaatgcgt
cctgaaaaagttattccgaaagatgctcctgctaaatttatggagttaggtatttctgaa
gactgggttcctgtcatccagaaagctggttataacctcgtatcagacatgaaagatgtt
aacccgcaaaaacttcatcaggatatctgtggtataaacaaaaagtataaactggaactg
accaatccgtccgtagacgaagtggcaggctggatacaaaaaatttaa
DBGET
integrated database retrieval system
