Phocaeicola coprophilus: I6J50_02460
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Entry
I6J50_02460 CDS
T07209
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
pcop
Phocaeicola coprophilus
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcop03032
]
I6J50_02460
03036 Chromosome and associated proteins [BR:
pcop03036
]
I6J50_02460
03400 DNA repair and recombination proteins [BR:
pcop03400
]
I6J50_02460
DNA replication proteins [BR:
pcop03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I6J50_02460
Chromosome and associated proteins [BR:
pcop03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
I6J50_02460
DNA repair and recombination proteins [BR:
pcop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
I6J50_02460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
RepL
HU-DNA_bdg
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
QRO25172
LinkDB
All DBs
Position
complement(559021..559296)
Genome browser
AA seq
91 aa
AA seq
DB search
MTKADIVNEIAKNTGIDKATVLTTLEAFMDSVKDSLSKDENVYLRGFGSFIVKKRAQKTA
RNISKNTTIIIPEHNIPAFKPAKTFTLSVKK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagatattgtaaacgaaattgccaaaaacactggcattgacaaagccaca
gtactgacaaccctggaagcgtttatggattcagtaaaggattctttgtcaaaagacgaa
aacgtatacctgagaggttttggcagtttcatcgtcaagaaaagagctcagaaaactgct
cgcaacatctccaagaatacaactatcatcattccggaacacaatattccggcattcaaa
cctgccaagacttttacattgtcagtaaaaaaataa
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