Phocaeicola coprophilus: I6J50_03565
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Entry
I6J50_03565 CDS
T07209
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pcop
Phocaeicola coprophilus
Pathway
pcop00300
Lysine biosynthesis
pcop00470
D-Amino acid metabolism
pcop01100
Metabolic pathways
pcop01110
Biosynthesis of secondary metabolites
pcop01120
Microbial metabolism in diverse environments
pcop01230
Biosynthesis of amino acids
Module
pcop_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
pcop_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I6J50_03565 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I6J50_03565 (lysA)
Enzymes [BR:
pcop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
I6J50_03565 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
ACBP
Motif
Other DBs
NCBI-ProteinID:
QRO25359
LinkDB
All DBs
Position
complement(828183..829343)
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AA seq
386 aa
AA seq
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MKGTFPIHKFRELETPFYYYDTNLLRHTLDTIRKEAGKYNKFCVHYAVKANANPKVLSII
RESGLGADCVSGGEIKAAIKAGFPANKIVYAGVGKTDAEINLGLDYDIFCFNVESVPELE
VINELATAKGKIARVAFRINPDVGAHTHANITTGLAENKFGISMKDMDHVIDRALEMNNI
NFVGLHFHIGSQILDMGDFTALCNRINELQEKLYARQIIVEHINVGGGLGIDYAHPNRQP
VPDFASYFETYHKHLKLRPQQTLHFELGRSVVGQCGSLITKVIYVKQGTNKQFAIVDGGM
TDLIRPALYQAYHKIENITSDEATETYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSA
GAYGEIMASGYNCRQLPQGYTSDELV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaacattccctattcataaattccgcgaactggaaactcccttctattattac
gatacgaatctgctgcgccatacgctggatacgattcgtaaagaagccggaaaatacaac
aagttctgtgtacattacgctgttaaggccaatgcaaatcctaaggttttaagcatcatc
cgggaaagcggactgggagccgactgtgtaagcggaggtgaaatcaaggctgcaatcaag
gctggattcccggcaaacaagattgtttatgccggagtcggcaaaacagatgcagaaatc
aacctcggactggattatgatattttctgctttaacgtggaatctgttccggaacttgaa
gtcattaatgaactggctacagccaaaggtaaaatcgccagagtggccttccgcatcaat
ccggatgtgggtgcacatacgcatgccaacattacaaccggcctggccgaaaacaaattc
ggtatcagcatgaaggatatggatcatgtaatcgatcgggcactggaaatgaacaacatt
aactttgtcggtctccacttccatatcggttcacagatcctcgacatgggtgacttcact
gctctctgcaaccgcatcaatgaattgcaggaaaagctctatgcccgtcagatcattgta
gagcacattaatgtgggaggcggactcggtatcgattatgcccacccgaaccgccagcct
gtacctgactttgcttcctacttcgaaacttatcacaagcatctgaagctccgcccgcaa
cagacactccacttcgaactgggacgttctgttgtaggacaatgcggaagcctcatcaca
aaggtgatctatgtaaagcagggaaccaacaagcagtttgctattgtagacggaggtatg
acagaccttatccggccagctctttatcaggcataccacaaaatcgagaatatcacttct
gacgaagcaaccgaaacttacgatgtggtaggtccgatctgtgaatcatctgatgtattc
ggaaaagctatcgacttaaacaaagtgaaacgtggtgatctcattgccctccgttcagca
ggagcctacggggaaatcatggcatccggctataactgtcgtcagcttcctcagggatat
acttcagacgaactggtataa
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