Phocaeicola coprophilus: I6J50_06235
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Entry
I6J50_06235 CDS
T07209
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pcop
Phocaeicola coprophilus
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcop03032
]
I6J50_06235 (gyrA)
03400 DNA repair and recombination proteins [BR:
pcop03400
]
I6J50_06235 (gyrA)
Enzymes [BR:
pcop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
I6J50_06235 (gyrA)
DNA replication proteins [BR:
pcop03032
]
Prokaryotic type
DNA Topoisomerases
I6J50_06235 (gyrA)
DNA repair and recombination proteins [BR:
pcop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I6J50_06235 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
UBL_AVO1
Trans_coact
Motif
Other DBs
NCBI-ProteinID:
QRO25839
LinkDB
All DBs
Position
complement(1416188..1418752)
Genome browser
AA seq
854 aa
AA seq
DB search
MQEQDRIIKINIEEEMKSSYIDYSMSVIVARALPDVRDGFKPVHRRILYGMMELGNTSDK
PYKKSARIVGEVLGKYHPHGDSSVYGALVRMAQDWAMRYPLVDGQGNFGSVDGDSPAAMR
YTEARLKKIGEDMMQDLYKETVDFQNNFDDTLQEPVVMPTRIPNLLVNGASGIAVGMATN
MPTHNLSEVIDACVAYIDNNEIDIDGLMQYIKAPDFPTGGYIYGISGVRDAYETGRGRVI
MRAKAEIESHPTHDKIVVNEIPYNVNKKELIESIASLVNEKKIDGISYVNDESDREGMRI
VIDVKRDANASVVLNKLFKMTALQTSFGVNNIALVHGRPKLLNLKDLIQLFVEHRHEVII
RRTQYDLRKAKERAHILEGLIIASDNIDEVIRIIRAAKTPNEAITNLMERFQLSEVQARA
IVEMRLRQLTGLMQDQLHAEYEDLMKQIAYFEEILVNEELCKKVIKDELIEVKEKYGDKR
RSEIVYASEEFNPEDFYADDEMVITISHLGYIKRTPLSEFRAQNRGGVGSKGSETRDEDF
IEHIYPATMHNTMLFFTQKGKCYWLKVYEIPEGNKTSKGRAIQNLLNIDADDVVTAYLRV
KNLNDTEFINSHYVLFCTKNGVIKKTLLEQYSRPRQNGVNAITIREDDRVIEVRMTNGNN
EIVIANRNGRAIRFHESAVREMGRTATGVRGITLDEDGQDEVIGMICIKDPLKETIMVVS
ENGYGKRSDIEDYRKTNRGGKGVKTLNITDKTGKLVAIKSVTDENDLMIINKSGITIRLK
VADVRIMGRATQGVRLIDLEKRNDQIGSVCKVTSETEEEGSVAEGEETAPASDITPDIVP
SDDMIQETDETDKN
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaacaagacagaattataaaaatcaacatcgaagaggaaatgaagtcgtcgtac
atcgattactccatgtcagtaattgttgcacgcgccctcccggatgtcagagacggtttc
aagcctgtacatcgccgaatcctttatggaatgatggaactgggtaatacgtctgacaaa
ccttacaaaaaatctgcaagaatcgtcggtgaagtattgggtaaataccatcctcatgga
gattcatccgtatacggagcactggtccgtatggctcaggactgggctatgcgttatccg
ctggtagacggccagggaaacttcggttccgttgatggtgacagccctgctgccatgcga
tacaccgaagcccgactgaagaaaatcggagaggacatgatgcaggatttgtataaggaa
acggttgatttccagaacaacttcgatgatactctgcaggaaccggttgtcatgccgacc
cgcatcccgaatttgcttgtaaacggtgcttcgggtattgccgtaggtatggctaccaat
atgccgactcacaatttatcagaagtaatagatgcctgtgtagcttacattgacaataac
gaaatcgatattgacggcctgatgcagtacatcaaggctcccgatttcccgaccggaggc
tatatatacggtatcagcggtgtacgtgatgcatacgaaactggtaggggacgtgtgatc
atgcgtgccaaggctgaaatcgaatcgcatccgacacatgacaagattgttgttaacgag
attccttataacgtcaacaagaaagaattgattgaaagcatcgcttctctggtcaacgaa
aagaagattgatggtatttcatacgtcaacgatgaatcagaccgtgaaggtatgcgtatc
gtcatcgatgtgaaacgcgatgcaaatgccagcgttgtattgaacaaactgttcaagatg
acagcgctgcagacttcttttggcgtaaacaacattgccctggttcacggacgcccgaaa
ttgctgaatctgaaagatttgatccagctgttcgtagaacaccgtcacgaagtaatcatc
cgccgtactcagtatgacctgcgcaaagcaaaagaacgcgcacacattctggaaggtctg
atcattgcttccgacaatatcgatgaagtaatccggatcatccgggctgccaagactccg
aatgaagctatcacgaacctgatggaacgcttccagttgtcggaagtgcaggcacgtgca
atcgtagaaatgcgtttgcgtcagttgactggtctgatgcaggatcagctgcatgctgaa
tatgaggatctgatgaagcagatcgcttatttcgaagaaattctggttaacgaagagctt
tgtaagaaggttatcaaggacgagctgatcgaggtaaaagaaaaatatggcgacaagcgc
cgttctgaaatcgtctatgcttctgaagaattcaatccggaagatttctatgccgatgat
gagatggtcatcacaatctcacatctgggatatatcaagcgtactccgttgtcagagttc
cgtgcccagaaccgtggcggcgtaggctcaaagggtagtgagacacgcgacgaagacttt
attgaacatatttatcctgccaccatgcataacacaatgctcttcttcacacagaagggt
aaatgctactggctcaaggtttatgaaattcctgaaggaaacaaaacttccaaaggacgt
gcgatccagaacttgctgaatattgacgctgatgatgtggtaactgcttatctgcgcgtc
aagaacttaaatgatactgaatttatcaatagccactatgtcttgttctgtaccaagaat
ggtgtaatcaagaaaaccttgcttgaacaatattcaagaccaagacagaatggtgtaaat
gctattacaattcgtgaggatgaccgcgtcattgaggtacgtatgaccaatggaaataat
gagatcgtcattgccaaccgcaacggacgtgccattcgtttccatgaaagtgctgtacgc
gaaatgggacgtaccgcaaccggtgtgcgcggaatcaccctggatgaagacggacaggac
gaagttatcggaatgatctgcattaaagatccgttgaaagaaaccatcatggttgtttct
gaaaacggttacggaaaacgttccgatattgaagactaccgcaagaccaaccgtggaggt
aaaggtgtcaagactttgaacatcacggacaaaacaggtaaactggtagctattaagtcg
gttacggatgagaatgatttgatgatcatcaacaagtccggtatcaccatccgtctgaag
gtagcagatgtccgcatcatgggacgagctactcagggagtccgtctgatagacttggaa
aaacgaaatgatcagattggttctgtatgtaaggttacttcagaaacagaagaggaggga
agtgtagcagaaggagaagaaacagctccagcatcagacatcactccggatatagttcca
tctgatgatatgattcaggaaacagacgagacagacaaaaactaa
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