Phocaeicola coprophilus: I6J50_06340
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Entry
I6J50_06340 CDS
T07209
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pcop
Phocaeicola coprophilus
Pathway
pcop03030
DNA replication
pcop03430
Mismatch repair
pcop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J50_06340 (holA)
03430 Mismatch repair
I6J50_06340 (holA)
03440 Homologous recombination
I6J50_06340 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcop03032
]
I6J50_06340 (holA)
03400 DNA repair and recombination proteins [BR:
pcop03400
]
I6J50_06340 (holA)
Enzymes [BR:
pcop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6J50_06340 (holA)
DNA replication proteins [BR:
pcop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6J50_06340 (holA)
DNA repair and recombination proteins [BR:
pcop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6J50_06340 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
POTRA_1
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
QRO25853
LinkDB
All DBs
Position
complement(1441131..1442147)
Genome browser
AA seq
338 aa
AA seq
DB search
MAKETTYEEIARNLKNKIYSPVYFLMGEEDYYIDRISDYIMDTVLTETEKEFNLTLLYGS
DTDIVSIINAARRYPMMSKYQVVIVREAQNLKNLDELIHYLQKPMSSTILVMCYKHGTLD
RRKKITAELEKAGVLFESKKLKDTQLPGFISSYLKRKQVEIEPKASEMMAEFVGTDLNRM
AGELEKLIITLPAGQKRITAEQIERNIGISKDYNNFELRNALIEKDVFKANQIVKYFEDN
PKNNPLQVTLAVLFNFFSNLMLAYYAPDKSDQGIASQLGLRSPWQAKDYMAGMRKYTGVK
VMQIIGAIRTCDAKSKGIDNPSIPDGELLRELVYFILH
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagaaactacatacgaagagatagcccgcaacctgaaaaacaagatctattct
cccgtctatttcctgatgggagaagaagattattacatcgaccggatctctgattacatc
atggataccgtcctgacagaaacagaaaaagagtttaatctgacgcttctgtacggatca
gataccgatatcgtatcgattatcaatgctgccagacgctatccgatgatgtcgaaatac
caggttgtcatcgtcagggaagcccagaatcttaagaatctggatgagctgattcactat
ctgcagaagccgatgagctcaaccatcttagtaatgtgctacaagcacggaactctggac
cggcgaaaaaagattacagccgaactggaaaaggccggagtattatttgaatccaagaag
ctgaaagatacccagctgcccggattcatttcatcctatctgaagcgcaaacaggtggaa
attgaaccgaaggcatcagagatgatggccgaatttgtcggaacagatttgaaccggatg
gcaggtgaattggaaaaattaattatcactcttccggccggacaaaaacggattacagcc
gaacagattgaacggaacatcggcatcagtaaagattataacaatttcgaattaaggaat
gccctgattgaaaaggatgtgttcaaggcaaatcagatagtaaaatattttgaagataat
cccaagaataaccctttgcaggtcacgctggccgtactctttaatttcttttccaacctg
atgctggcttactatgcacccgacaaatccgaccagggaattgccagtcagctgggactt
cgctcaccctggcaggccaaagactacatggcaggcatgcgcaaatatacaggggtcaaa
gttatgcagattatcggagccatccgcacctgtgatgcgaagtctaaaggcatagacaat
ccgtccattccggacggggaactcctgcgtgaactggtctactttatccttcattaa
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