Phocaeicola coprophilus: I6J50_08150
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Entry
I6J50_08150 CDS
T07209
Name
(GenBank) ribonuclease H-like domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pcop
Phocaeicola coprophilus
Pathway
pcop03030
DNA replication
pcop03430
Mismatch repair
pcop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J50_08150
03430 Mismatch repair
I6J50_08150
03440 Homologous recombination
I6J50_08150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcop03032
]
I6J50_08150
03400 DNA repair and recombination proteins [BR:
pcop03400
]
I6J50_08150
Enzymes [BR:
pcop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6J50_08150
DNA replication proteins [BR:
pcop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6J50_08150
DNA repair and recombination proteins [BR:
pcop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6J50_08150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
DUF2095
Hema_HEFG
Motif
Other DBs
NCBI-ProteinID:
QRO26161
LinkDB
All DBs
Position
1853083..1853859
Genome browser
AA seq
258 aa
AA seq
DB search
MKLNLKNPLVFFDLETTGTNINTDRIVEICYLKVYPNGNEESKTMRINPGMHIPEASSAI
HGIYDADVADCPTFKEVAKDIARDLEGADIAGFNSNRFDVPVLVEEFLRAGIDIDLTRRK
FIDVQVIYHKLEQRTLSAAYKFYCGKNLEDAHTAEADTRATYEVLKAQLDHYPDVLENDI
NFLSEYSSYNKNVDFAGRIVYDDKGVEVFNFGKYKGMPVSEVLQRDPGYYGWVLNGDFTL
NTKNVLTKIRLRESGLLK
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaatctgaagaacccgctggttttcttcgacctggaaaccaccggaacgaac
atcaatacagaccgcatcgtcgaaatctgctacctgaaggtttatccaaacggcaacgag
gaaagcaagaccatgcgcatcaatccgggcatgcatattcccgaagcttcatctgcaatt
catggaatttatgatgcagacgtggccgactgtccgacattcaaggaagtagccaaggac
attgcacgcgacctggaaggtgcagacatcgccggattcaattccaaccgcttcgacgtt
ccggttctggtggaagaattcctgcgcgcaggcatcgacatcgatctgacacgccggaaa
ttcattgacgtgcaagtcatctaccacaaactggaacagcgtaccctttcggctgcctac
aagttttattgcggcaagaacctggaggacgcacacactgcggaagccgacacacgggca
acctatgaagtgctgaaagcccagctggaccattatccggatgtattggaaaacgacatc
aacttcctgtctgagtattcaagctacaacaagaacgttgactttgcaggacgtatcgtc
tacgacgataaaggtgtggaagtgttcaacttcggcaaatacaagggaatgcctgtttct
gaagttctgcaacgcgatccgggctattacggatgggtcctgaacggtgacttcaccctg
aacaccaagaacgtactaaccaaaatcagactgcgtgaaagcggactgctgaaataa
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