Phocaeicola coprophilus: I6J50_09050
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Entry
I6J50_09050 CDS
T07209
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcop
Phocaeicola coprophilus
Pathway
pcop03420
Nucleotide excision repair
pcop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6J50_09050
03430 Mismatch repair
I6J50_09050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcop03400
]
I6J50_09050
Enzymes [BR:
pcop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6J50_09050
DNA repair and recombination proteins [BR:
pcop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6J50_09050
MMR (mismatch excision repair)
Other MMR factors
I6J50_09050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QRO23238
LinkDB
All DBs
Position
complement(2067388..2069769)
Genome browser
AA seq
793 aa
AA seq
DB search
MANYLDELNEGQRAAVLYNDGPSLVIAGAGSGKTRVLTYKIAYLLDQGYKPWSILALTFT
NKAAREMKERIARQVGENLARYLWMGTFHSIFSRILRAEADAIGFSSNFTIYDASDSKSL
VKSIIREMGLDDKTYKPGVVQSRISQAKNHLILPDAYAASGELYRADADAKMPQLRDIYL
RYWERCRQSDAMDFDDLLVYTYQLFKSHPEICDKYATHFEYVLVDEYQDTNYAQHCIVQL
LTGKHRRVCVVGDDAQSIYSFRGANIDNILNFTNLYREARLFKLEQNYRSTQTIVKAANS
LIAKNREQIRKEVFSEKETGEPITVFCAYSDLEEAEIVGNRIMQLHSREHYGYSDCAILY
RTNAQSRVFEETLRKKNIPYRIYGGLSFYQRKEIKDIIAYFRLAVNPNDEEAFKRVLNYP
ARGIGDTTLNKLVDAANRHKVSLWTVVNEPLAYGVDINKGAHTKLQGFRALIAGFVEAVP
QKNAFELGKEIVFQSGIGREITQDRSPENLSRQENVEELMNGIHDFCATRQEEGNTHWLL
SDYLSEVSLLTDQDSDRDADLPKVTLMTIHSAKGLEFRNVFVVGLEENLFPGASAASSYK
ELEEERRLFYVALTRAEDYCFLSYAKTRFKYGKSEFCTPSRFLKDIDSRYLNMPQEEMLA
RQIEERGERFRRENTQRPVVRMERDYGYRERMVTDNGPSMFDGGEIPQEPRRFVKPAPPR
NLRKITPAVSSSAGQASSVQGLAVGQVIEHERFGIGDVINVEGTGDNCKATVHFRNVGNK
QLLLKFARFKVIG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattatttagatgaactgaatgaagggcagcgtgcggctgtgctttataatgac
ggtccttctctggttattgctggagccggatcgggaaagacacgcgtgctgacctataag
atcgcatacttactggaccagggctataaaccctggtctattttggcattgacatttacc
aataaggcggcccgtgagatgaaagaacgtatagcgcggcaggtgggcgagaatctggcg
cgttatttatggatggggacttttcattccatcttttcgcgtattcttcgtgcggaagcc
gatgcgataggtttttcatccaatttcactatctatgatgcgtcagactcgaaaagtctg
gtcaagtccattattcgtgagatggggctggatgacaagacttacaagccgggagtggta
cagagccgtatcagtcaggctaaaaaccatttgatcttgccggatgcttatgctgccagc
ggggaattgtatcgggcagatgctgatgccaagatgcctcagttgcgtgatatttatctc
cgttactgggaacggtgccgtcagagcgatgcaatggattttgatgatctgctggtttat
acctatcagttgttcaaatcgcatccggagatctgcgacaaatatgcaacgcatttcgaa
tatgtgctggtggatgagtatcaggatacaaactatgcgcagcattgtattgtacagctg
ctgacgggtaaacatcgccgtgtctgtgtggtgggagatgatgcacagagcatttattcg
tttcgcggagccaatatagacaatattctgaattttaccaatctttaccgggaggcccgt
ttgtttaagctggagcagaactatcgttccactcaaacgattgtcaaagctgcgaacagt
ctgattgcaaagaaccgggagcagatccggaaagaggtcttttctgaaaaggagacgggg
gaaccgattaccgtcttttgtgcttacagtgatctggaggaagcggagattgtaggaaac
cgtatcatgcagctccatagccgtgaacattatggttacagtgactgtgccattttgtat
cgtacgaatgcgcagagccgtgtttttgaggaaaccttgcgtaagaaaaacatcccttac
cgtatttatggaggtttgtcgttctatcagcgtaaggaaataaaggatattatcgcttat
ttccgtctggctgttaacccgaacgatgaggaagcattcaagcgggtattaaactatccg
gccagagggatcggagatacgacattgaataaactggtggatgctgcaaaccggcataag
gtgagtttgtggactgtcgtgaatgaaccgctggcttatggcgttgatataaataaaggt
gcgcatacaaaattgcagggattccgggcactgattgccggatttgttgaggctgtacct
cagaaaaatgcttttgaactgggaaaagaaattgtatttcagtctggtatcggacgggaa
atcacacaggaccgttccccggaaaatctgagccgtcaggagaatgtggaagaactgatg
aacggtattcatgatttttgtgctacgcgacaggaagaaggaaatacgcattggttactg
tcggattatctttcagaagtgtcgttgctgactgatcaggacagtgaccgcgatgcggat
ttgcctaaagtgactctgatgaccattcactcagcgaagggacttgagttccggaatgtc
tttgtcgtagggctggaagagaatctttttccgggagcttcagctgcttcctcttataaa
gagctggaggaagagcggcgtttgttttatgttgctctgacccgtgcggaggattattgt
tttctttcgtatgcgaaaacccggtttaaatacggaaagtctgaattctgcactccaagc
cgtttcctgaaagatattgacagtcgttatctgaatatgccgcaggaagaaatgctggcc
cgtcagatagaggagcggggagaacgtttccggcgtgaaaatacgcagcgccctgtcgtt
cggatggagcgtgattacggatatcgggaacgcatggttaccgataacggaccgtctatg
tttgatgggggagagattccacaggagcctcgccgtttcgtgaaaccggctcctccgcgg
aatttgcgtaagattactccggctgtttcttcttctgcaggacaggcttcttcagttcag
ggactggctgtgggacaggttattgaacatgagcgctttggaatcggcgatgtaattaac
gtggaaggaaccggagataactgcaaggctacggttcatttccgtaatgtgggcaacaag
cagcttctgttgaaatttgcccgttttaaagtgataggataa
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integrated database retrieval system
