Phocaeicola coprophilus: I6J50_09835
Help
Entry
I6J50_09835 CDS
T07209
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pcop
Phocaeicola coprophilus
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcop03016
]
I6J50_09835 (truA)
Enzymes [BR:
pcop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
I6J50_09835 (truA)
Transfer RNA biogenesis [BR:
pcop03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
I6J50_09835 (truA)
Prokaryotic type
I6J50_09835 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QRO23378
LinkDB
All DBs
Position
complement(2245624..2246373)
Genome browser
AA seq
249 aa
AA seq
DB search
MFRYFIYLSFDGTNYHGWQIQPNGASVQETLMKALSTFLRREIEVVGAGRTDAGVHARLM
VAHFDFDTELDGEVVTDKLNRLLPPDIAVYGVRRVKPEAHARFDATSRTYKYYIHTRKDP
FRRGYSWRIFQPLDFERMNEAAQTLFDYTDFTSFSKLHTDVKTNNCRIMLARWEQTGDGE
WVFTIRADRFLRNMVRAVVGTLVEVGRGKLTVDGFRRVIEEKNRCSAGTSVPGHALYLTD
VSYPDDLFL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgttccggtatttcatctatttgtcgttcgacggaacgaattaccacggctggcagatc
cagccgaacggagcgagtgtgcaggaaacgctgatgaaggcgctttctaccttcctgcgc
cgggagattgaagtggtgggagccggacgtacggatgccggtgtgcatgcgcggctgatg
gtggctcactttgactttgacacggagctggacggggaggtggtgacggacaagctgaac
cggctgctgccgccggacattgcggtgtacggggtgcggcgggtgaaaccggaggcgcac
gcgcgctttgacgcaacttcgcgcacgtacaaatattatatccacacgcggaaggatccg
ttccgcagggggtattcgtggcgcatcttccagccgctggatttcgaacggatgaacgag
gcggcacagacgctgtttgactatacggacttcacgagtttcagcaagctgcatacggac
gtgaagacgaacaactgccggatcatgctggcccgctgggagcagacgggggacggggaa
tgggtgtttaccatccgggctgaccgtttcctgcgcaacatggtgcgggctgtggtagga
acactggtggaggtgggccgcggcaagctgaccgtggacgggttccgccgggtgatcgag
gagaagaaccgctgcagtgccggtacgtcggtgccgggacatgcactgtatctcacggat
gtgagttatccggacgatctgttcctctag
DBGET
integrated database retrieval system
