Phocaeicola coprophilus: I6J50_10425 Help Entry I6J50_10425       CDS       T07209                                  Name (GenBank) type IV secretion protein Rhs Organism pcop  Phocaeicola coprophilus SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SpvB TcdB_toxin_midN RHS_repeat FG-GAP_3 FG-GAP DUF6443 RHS Motif Other DBs NCBI-ProteinID:  QRO23480 LinkDB All DBs Position 2402616..2411651 Genome browser AA seq 3011 aa AA seqDB search MKNYIQKVAWALVLLLAATLSLSAKDGTAVRKLFKKGVSDSISVGGSKLVVLQKDLIRNR SLSVNSIGEENVPELDFAMTNVTAGGHGYRFLPHGTHFTGEGATVKIKYDRTRIPSGYTE DDIRTYYYDPAEKHWVALERVRVDKKEECVVSKTTHFTDMINGVIQAPESPQTEGFAPTM MNDIKAADPTAKLNVIAPPSANNRGSANLQYPFEMPPARNGMQPSLGLQYSSEGGSGWLG EGWNVSVPSITLDTRWGVPRYDLSKETETYLLSGSMLSTMDDNGQMGVAHRGEKMNRKAD RQFYTRQGGDFNRIIRKGDSPANYYWEVTDKQGVKYIYGGDGAVVKGNVTDASGNTREVI AEWKLKRVEELHGDYIEYVYDIVDEDVRGGLKAKAAYLKEVHAGNAGQEPHTVVLFDGNK VKQVKTNNARYGFLASSNRLLEKVTVNFQGETLRSYAFDYKEGAFHKEMLTGVRQYDNTG KEVAFQNFDYYDDVQADKGYVPFKDDSEKWNTHDDGLDAGFVNPLKTVSKRFSDKPTALG GTTSSSVSGSFYAGVGPWDGSKWKSNTIGGSYSYSSDTSKGLSAFVDLNGDGLPDKVYKS GGSVYYRPQVKTDNGEVVYGEPVKVKGISNFSTTKSSTNSFGAKAVVGWNVLTAVVGTDK STTKTKTTQYFSDINGDGLVDLVSNGKVYFNHLEFDQSGNAVPTFTLSSADTPSPIIYGG KVDTSVMEVSKDEQAEAIKNSPMEDIVRVWQAPKDGTVSVTGQVSLIAPTDDYDADEYQK ADGVRIAIQKGGNELWNKTIAKGDNSPYSAAVSSVAVKRGDRIYFRVQSGSEETSNGSFD KVSWSPTITYAGESNILPNGLSSTEYKPEDGAIYDVNTSANVENGSSVEVRSAFHKPVTT DDVVLCIIGSNEKKDSDGNDNPNYIEKTVFARTLKANEAFGGDSLNISLENTEKLTNFSF EISSTSNVDWKNIGWQASVTYKDSANVEQTMAVPAHYKIFANALKEGKPYLTTAADTALV VSPVLALSDNALNGEVVLTAKTVDALVGKKIFKIQNGILQSDTLRLSNFGGKKIWFEYSY PSTISDGALTSASVSVQKDAAGLVVESVPAGFYAESDNNGFGMLYRGWGGFVYNAAEGRY AKPIDESLLKLPENEDDKVDPLTMAFTPLGTDQTSMDKWVGQRQDIYLTATEASTARLTE QDVLLSNPLENDTEVAGLAGEYLQGTGAAAVSQVMSSKSTVVQGGALGITHNDASGNAKT EVTMMDMNGDGFPDIIAGGTIQYTNSLGGLSGEIYKGIGSSNSDNASQAWGYGGNPVASA SSITNLISKGKATILNQQTAWLAQFSISGSAPKNTDEAVESFIDINGDGLPDKILSDKKV KLNLGYAFTEPIDWELDRVQDGKSLSYNIGASGNTPEAGWGKFQDEKYKDINKASGSFSA GFGIVTSESEEEYNLIDINSDGLPDKVWKDGDGITVALNTGNGFDEPISWKGASALSESA STSESANAAFTLTINIPVISIKISTNPGASTSHSINRPTYSLQDVDGDGYLDIVESEKES ELKVTRSAIGRTNMLKSVTNSLGGTFTLDYAHTTPTYGLPGGKWVMAALTVDDGIHDDGP VMTTAFEYKDGKRDRHEREFLGFGEVITKNLDTEKGNSVYRQAVENYDVANYYTQGNVTA TSVEDANGNKYTETKNRYDSYYLTADGDKYTFAKRDVNLWSDRASAFVPLRYTANLQYEG AANGVVTSEAWNEYYLNGYHGELKSYKYSDKGSLGEDGNGKFDYATAIKYTDNASKHIFG LPVDVTVTGGDGSLYHHVTAKYNTNYANHITQITQQLNDGEAVTDYKYDSYGNIIQKTLP ANGKGQRMWYKYRYEPEMNMYVERIDDAWGYRSEQGNFDYRYGIAKEHRDLNNFYYETDV DDLGRITGVRGPNELATGVPYAIAFEYQPLATFGESGITAPAYAVTKHYDIQHPNDDLET ITFVDGFGRAVQVKKDGVVTSASKGNSAKDENVMIVSGRNVYDAFGRVAKAFYPTTEGTG SKSTFSKSFDNVSPTVTVYDVLDRAASVTLPDNSTTTTAYTVDNGSHALVTTVTDALHNV QATHTNGSGKTLKTIQKSGPDGEITTSFEYDGIQRLVRVTDTEGNVTTSTYDMGDRRTEV NHPASGITSFTYDALGNVLTKQTANLAKEGKFITYDYDYQRLTGINYPDHPENNVKYYYG GRNASQNRIGRLMLREDGTGAIEYFYGKMGEVTKTRRTMIVPNQAIATYVTQWTYDSHNR LLEMIYPDEEKITYSYNLGGQLEKVHGYKSYGYDYVSKIGYDKFEQRTYLKYCNGAETFY TYDPQRRRLQNLTVNSGGNTIMDNAYTYDAVSNVLSVVNGASVPQSGKAGGQMAHTYTYD ALYRLVSATGTYTGADNKTASYTLAMGYDNMHRITSKRQILTQNNVQFNGTLNAGYDLSY NYGTDTGKKFQLANVKDVNYRTEETPSESENVNNNHAYEYDANGNLIYVNTSRTKKDGVA DEKTTERKLKWDEENRLLASDDNGFVTNYWYDADGERTVKTSGESDQVYVNSEFAGGRTN TAKFSLYVSPYLVANQGGRYTKHIYIGSQRVVSKIGDFDSYGSDPRRIQYAGSETDGLSV DYKAKYTGQLQAIKDNYATFAVPYNGEDNNDYVDGKGFCCNDGSLEAAQARVMARAMMNN FQEGDAYEKMQFYYHPDHLGSSSYITNLDGEVVQHIEYVPFGEVFVEERNNIWNTPYLFN AKEFDEETGLYYFGARYYDPRLSLWISTDALKEKTPNVSPYIYTDNNPIIYIDPDGNFRW KALAEASRKWYNLWHKNKASEVIENRDTKNPSLRYSYQVCSYENGEFVVTLHYKVGKEFV NAAQNVGDAAAIAGYALTLSVAGAEVGVPLAGIGNTISGAAGITGMLIDAVNGDWADVLK SGVFVLIDKATGKLFHKYLPSHDKKIGEEGFDLGTEILDQNRQLKISGAEKITDKVIEEK DSKNNNTKDNK NT seq 9036 nt NT seq  +upstreamnt  +downstreamnt atgaagaattatatacagaaggtggcgtgggcattggttttactgcttgccgccacactg tccctttcggcaaaggacgggacagccgtgagaaagctcttcaagaagggtgtctctgac agtatctccgtaggaggtagcaaactggtcgttcttcagaaagacctcattcggaacaga agcctttccgtgaactctatcggagaggagaatgtccctgagcttgactttgccatgacc aatgtcacggcaggaggacatggctaccgttttctccctcacggaacacacttcacaggc gagggcgcgactgtcaagataaagtatgaccgcacgaggataccaagcggctataccgag gacgacatccgtacctattactacgacccggccgagaagcattgggttgcgttggagcgt gtgcgtgtggacaagaaggaagagtgtgtcgtttcaaagacgacccacttcaccgacatg atcaacggtgtgatacaggcaccggagtctccgcagaccgaaggctttgccccgacgatg atgaacgacatcaaggcggcagaccctacggcgaagctcaatgtcattgcgcctccaagc gcaaacaaccgtggctctgccaacctgcagtatccgttcgagatgccgccagcacgaaac ggtatgcagccaagccttggtttgcagtacagcagcgagggcggtagcggttggcttggc gagggttggaacgtcagcgtgccaagcattacgcttgacacccggtggggcgtgcctcgt tatgacctgtcaaaagagacggagacttatctcttgtccggttcaatgctctccaccatg gacgacaacggacagatgggagtcgcacaccgtggcgagaagatgaacagaaaggcggac cgccagttctacacccgccaaggcggtgatttcaaccgtatcatccgcaagggtgacagt cctgccaactattattgggaggttacagacaagcagggtgtcaagtacatctatggtggt gacggagctgttgtaaagggcaatgtcaccgatgcttcgggcaatacccgtgaggtgatt gccgaatggaagctgaaacgtgtcgaggaactccacggtgactatatagaatatgtgtat gacatcgtggatgaggatgtgcgtggcggcttgaaggccaaggctgcatatctgaaggag gttcacgcaggtaatgcaggacaggaaccgcacaccgttgtactctttgatggcaacaag gtaaagcaggtaaagaccaacaatgcccgttatggattcctcgcctcctccaacaggctg ttggagaaagtgaccgtgaatttccagggcgagacattgcgcagctatgcctttgactac aaggaaggtgcattccacaaggaaatgctcacaggtgtcagacagtatgacaacaccgga aaggaagtggctttccagaacttcgactattatgatgatgtgcaggcagacaagggttat gttcctttcaaggacgattccgagaaatggaacacgcacgatgatggacttgacgctggt tttgtcaatccattgaagactgtcagcaagcgcttcagcgacaagccaactgcacttggc ggaacgacaagttcttctgtaagcggttcgttctatgcaggtgtgggaccttgggacgga agcaaatggaaaagcaatacaataggaggttcttacagctactccagcgataccagcaag ggactttccgcattcgttgacttgaacggtgacggacttcctgacaaggtatacaagtct ggtggttccgtatattatcgtccacaggtcaagactgacaacggagaagtagtatatggt gagcctgtcaaggtaaagggtatcagtaacttctcgacaaccaaaagttctacgaactct ttcggtgcgaaagccgttgtcggttggaatgttctgactgccgttgtcggaacggacaag tcaaccactaagacaaagaccactcagtatttcagcgacatcaacggtgacggacttgtt gacctcgtttccaatggcaaggtatatttcaaccatttggagtttgatcagtctggcaat gccgtgcctacgtttacattgagcagtgccgacacgccaagcccaattatctatggtggc aaggttgacacttctgtcatggaggtcagtaaggatgagcaggcggaagccatcaagaac tcaccgatggaggatattgtgcgtgtatggcaggctcctaaggacggaactgtcagcgta actggtcaagtaagcctcattgcaccaacagatgactatgatgctgacgagtatcagaag gcagacggcgtaagaattgccatccaaaagggaggcaatgaactttggaacaagacgata gccaagggtgacaacagtccatacagcgcagccgtatcatctgttgccgtcaagcgtggt gacagaatctatttccgtgtccagtctggctctgaggaaacaagcaacggttcttttgac aaggtgagctggtcgcctaccattacatacgctggcgagtcaaatatcttgcctaacggg ctttcttcaacagagtacaagcctgaggatggtgccatctatgatgtgaacacctctgcc aatgtggagaatggttcaagcgtggaagttcgcagtgccttccacaagcctgtaacaacc gacgatgttgttctctgcatcatcggcagcaatgaaaagaaagacagtgacggaaacgac aacccgaactatatcgagaagactgtctttgctcgtacattgaaggctaatgaggctttt ggtggcgattctctcaacatcagtctggagaatacagaaaagctgaccaacttcagcttt gagatttcatctacctcaaatgttgattggaagaatatcggttggcaagcgtctgtaact tacaaggattctgccaatgttgagcagaccatggcagttcctgcacattacaagatattc gccaatgccttgaaggagggtaagccatatctaaccacagcggcagacactgctttggta gtatctcctgtactcgcactttctgacaatgccctcaatggtgaggtggtattgacggca aagactgttgatgcccttgtcggcaagaagatattcaagatacagaacggtattttacag agcgataccttacgcctttcaaactttggcggaaagaagatttggtttgaatacagttat ccttcaaccatttctgacggagcgttgacctctgcttctgtttctgttcagaaagatgct gcgggacttgttgttgaaagtgttcctgctggattctatgcagaaagcgataacaatggc ttcggtatgctctaccgaggttggggcggctttgtctataatgcggcagagggcagatac gccaagcctattgacgagtcattgctgaaattgccagagaacgaggacgacaaggttgat ccgctcacgatggcattcaccccattgggtaccgaccagacctccatggacaagtgggtc ggtcagcgacaggacatctatcttactgcaaccgaggcaagtacagcccgactgaccgag caggatgttcttctctccaatccgttggagaacgataccgaggtagcaggacttgcaggt gagtatttgcaaggtactggtgctgcggcagtaagccaagtgatgtccagcaagagcacg gtagtgcaaggcggtgcgcttggtatcacacacaacgatgcgagcggtaatgccaagaca gaggtcaccatgatggacatgaatggtgacggattccctgacatcatcgctggtggtacg attcaatacaccaactctcttggtggactgagcggcgaaatctataagggcatcggctcc agcaactccgacaatgcttcacaggcatggggatatggcggcaaccctgtggcttcagcg tcaagcatcacaaatctaatctccaagggcaaagcaaccatactgaaccagcagactgca tggctggctcaattctccatttctggcagtgcgccaaagaatacggatgaggcagttgaa tctttcattgacatcaatggcgatggacttcccgacaagattctttcagacaagaaagta aaactgaatcttggctatgctttcactgagcctatagattgggaacttgaccgtgttcaa gacggtaagagtctttcttataatattggtgcaagtggtaatactcctgaggcaggttgg ggtaaatttcaagatgaaaagtataaggatataaacaaggcttctggtagtttctcagca ggtttcggtatcgtaacctctgaaagtgaagaggaatacaaccttatcgacatcaactct gacggtcttcctgataaggtatggaaggatggtgacggtataactgttgccctcaataca ggcaatggctttgacgagcctatcagttggaagggtgcaagtgcgcttagtgaatctgcc tctacatcagagtctgcaaatgcagcgttcactttgaccatcaacattcctgtcataagc atcaagatttcaaccaaccctggtgcatcaacctcgcacagtatcaatcgtcctacctac tctttgcaggatgttgatggtgacggttatcttgacatcgttgagtctgagaaggaaagc gagttgaaggttacacgctctgccattggcagaacaaacatgttgaagtctgtcaccaat tccttgggcggtactttcacgctcgactatgcgcataccactcctacctacggacttcct ggtggcaagtgggtaatggctgcccttaccgttgatgatggtatccatgacgatggacct gtcatgactaccgcctttgagtataaggacggcaagcgtgaccgccatgaacgtgagttc ctcggtttcggtgaggtcatcaccaagaaccttgacacggagaaaggcaattctgtttac agacaggctgttgagaactacgatgttgccaactactacacgcagggcaatgttaccgcc acatccgtagaggatgccaacggcaacaagtacaccgagacaaagaaccgttacgacagc tactatctgactgccgacggtgacaagtacacgttcgcaaagcgtgacgtgaacctttgg agcgaccgtgcctctgcattcgtccctctccgctatacggcaaacttgcagtatgagggt gctgcaaacggtgtggttacatccgaagcatggaatgaatactacctcaatggctatcat ggtgagttgaagtcctacaagtacagcgacaagggaagccttggcgaggacggaaacgga aagtttgactatgcaaccgccattaaatacacggacaatgcaagcaagcacatcttcgga cttcctgttgatgttactgttacaggcggtgacggctcactctatcaccatgtgacggcg aagtataataccaactacgccaaccacatcacgcagattacacagcagttgaatgatggc gaggctgttacggattacaagtacgactcttacggcaacatcatccagaagactctccct gccaacggcaagggacagcgtatgtggtacaagtaccgctatgagcctgagatgaacatg tatgttgagcgcattgacgatgcgtggggctaccgcagcgagcaaggcaattttgactat cgctatggcattgccaaggagcatcgtgacctcaacaacttctactatgagactgatgtt gacgacctcggtcgcattactggcgtgcgtggtccaaatgagttggctacgggcgtgcct tatgccatcgcctttgaatatcagcctttggctacctttggtgagagtggcattaccgca cctgcttacgcagtgaccaagcactacgacatccagcaccctaacgatgacttggagacc attacgttcgttgacggtttcggaagagccgtgcaggtgaagaaggacggtgttgtgaca agtgcatccaaggggaactctgccaaggacgagaacgtgatgatagtcagcggaagaaac gtgtatgacgctttcggacgtgtggcaaaggcattctatcctacaacggaaggaaccgga tcgaagtccacattcagcaagtcatttgacaatgtatctccaacggttactgtttatgac gtgctcgaccgtgctgcctcagtgacattgccggacaactctacgacaactacggcatat actgttgacaacggcagtcatgcacttgttacaaccgtaacagacgcactccataatgtg caggctacccataccaatggcagtggcaagaccttgaagaccatccagaagagcggtcct gacggtgagattaccacctcgtttgagtatgacggcatacagcgccttgttcgtgtcacc gacacggagggcaacgtgacgacctccacttacgacatgggcgaccgccgtacagaggtg aaccatccagcaagcggcatcaccagtttcacttacgatgcactcggcaatgtgctgacc aagcagactgccaatcttgcaaaggaaggcaagttcattacttacgattacgactatcag cgtctgacgggtatcaactacccagatcatccggagaacaacgtgaagtattactacggt ggtcgcaacgcttctcagaaccgtatcggcagattgatgctccgcgaggatggaacaggt gccattgaatacttctatggcaagatgggcgaggtgacaaagacccgccgcacgatgatt gtgcctaatcaggcgatagcaacctatgtgacgcaatggacttatgacagccacaaccgt ctgttggagatgatttatcctgatgaggagaaaatcacctattcttacaatctcggtggt cagcttgaaaaggttcatggctacaagtcatacggctacgactatgtgagcaagatcggc tatgacaagtttgagcagcgcacatatttgaagtattgcaacggtgcggagactttctac acttacgacccacagcgtcgcagattgcagaacctcacggtgaatagtggtggcaacacc attatggacaatgcctatacatacgatgcggtgagcaatgtgctcagcgtggtaaacggt gcgtcagttccacagagtggaaaggctggcggacagatggcacatacctatacatacgat gccctctaccgtcttgtcagtgcaacaggtacatatactggtgctgacaacaagaccgca agttatactcttgcgatgggttacgacaatatgcaccgtatcacatcaaagcgtcagatt ctcacgcagaacaatgtacagttcaacggcacattgaatgcaggttatgatttgtcgtac aattatggaactgacacaggcaagaaattccagcttgccaatgtgaaggatgtgaattat cgcacggaagagacaccttcagaaagcgagaatgtgaacaacaatcatgcctatgagtat gatgccaacggaaacctcatttatgtcaacacaagccgtaccaagaaggatggcgtggct gacgagaagaccacggaacgcaaactcaagtgggatgaagagaaccgcctccttgcttct gatgacaacggctttgttaccaactattggtatgatgctgacggtgagcgtacggtgaag acatcaggtgagagtgaccaggtttatgtgaactctgagtttgcaggaggtcgcacgaac accgccaagttctcactctatgtatcaccttatctcgttgctaaccaaggcggacgctat acaaagcatatctatataggtagtcagcgtgtcgtttccaagattggagacttcgactct tacggctcagacccacgccgcatccagtatgcaggtagtgagacagatggcttgtctgtt gattataaagctaaatataccgggcagttgcaggctatcaaggataattatgcaaccttt gcagtgccgtacaatggcgaggacaacaacgactatgtggacggcaagggcttctgctgc aatgacggcagcttggaggctgcgcaggcacgtgtaatggcaagagcaatgatgaacaat ttccaagagggcgatgcatacgagaagatgcagttctactaccacccagaccatttgggt agcagtagttacatcaccaaccttgatggcgaggtggtgcagcatattgaatatgttcct ttcggtgaagtgttcgttgaggagcgcaataacatttggaatacgccttatcttttcaat gcgaaggaattcgatgaggagacaggattgtactactttggagcgaggtattatgacccg aggttgagtttgtggatttctacggatgcattaaaggaaaaaactccaaatgtatcaccg tatatttatacagataacaatcccatcatatatatagatcctgatggaaatttcagatgg aaagctttagctgaagcctcgcgtaaatggtacaatctatggcacaagaacaaagcttct gaagtaattgagaacagagatacaaagaatcccagtcttagatattcttatcaggtatgt tcttatgaaaatggtgaatttgttgtaactcttcattacaaagtcggtaaagaatttgtc aatgcagcccagaatgtcggagatgctgctgctatagctggctatgcattaacactgtct gttgctggtgctgaagttggtgtacctttggctggtattggaaacacaatttctggtgct gcaggtattacaggaatgctcattgatgcagtaaatggtgattgggctgatgtgcttaag agtggtgtttttgtacttattgacaaagcaacaggaaaattatttcataaatatttgcct agtcatgacaaaaaaatcggtgaagaaggttttgacttaggaactgaaatattagatcaa aatcgccaacttaaaatctctggagcagaaaaaatcaccgataaggtaatagaagaaaag gactctaaaaataataatacaaaagataataaataa

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