Phocaeicola coprophilus: I6J50_12635
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Entry
I6J50_12635 CDS
T07209
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pcop
Phocaeicola coprophilus
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcop01011
]
I6J50_12635
Enzymes [BR:
pcop01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
I6J50_12635
Peptidoglycan biosynthesis and degradation proteins [BR:
pcop01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
I6J50_12635
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM_RLK
Motif
Other DBs
NCBI-ProteinID:
QRO23869
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Position
2957080..2958336
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AA seq
418 aa
AA seq
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MKKFVIGLMTFLSATALYAQQTEKSITIQSAEGKVDVIDLPEGMLSETDSLYLDWVSKHY
INMSENCTMTSENPVVSDSIYMSRLQRIPAIIEMPYNDIVRKFIDMYATRLRQKVAFMLS
ANNLYMPIFEEALDLYDLPLELKYLPVIESALNPTATSSQGAVGLWQFMLRTGKVYGLKT
TSLVDERRDPIKSTWAAVRYLKDLYEIYHDWNLVLAAYNCGPGTINKAIRRAGGATDFWT
IYNYLPKETRGYVPAFIAANYIMTYYCEHNISPMDMNMPEGTDTIHISRNLNLNQVAGVC
NINIDQLRALNPEFKKDIIPGNEEPYALRLPNNMISCFIEHEDSIYNYKPEVYQTRRSTV
EVKDPAGTSTGKAVYYRIKNGDTLGGIAAKYGVSVNQLRRLNGIKGSSIRAGKSIRIR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttgtaattggtcttatgacctttctcagtgcaacagcactttatgcacaa
caaacggaaaaaagcattacgatacagtctgctgaaggaaaagtagacgtaatcgacctg
ccggaaggaatgctttccgaaacggacagcctataccttgactgggtgtccaaacactac
atcaacatgtcggaaaactgtaccatgacttccgaaaatccggtcgtaagtgattccatc
tatatgagccgcctgcaacggatccctgctatcattgaaatgccgtacaacgacatcgtt
cgaaaattcatagacatgtacgcaacccgccttcggcaaaaagtggcattcatgcttagc
gccaacaatctttacatgcctatcttcgaagaagcacttgacttatacgatcttcccctg
gaactgaaatatcttccggttatcgaatcagcacttaaccccactgctacatccagccag
ggagctgtcggcctctggcaattcatgctacgcaccggaaaagtgtacggcctcaagaca
accagcctggttgacgaacggcgtgacccgatcaaatcaacctgggctgctgtccgttac
ttgaaggacctgtacgaaatctatcatgactggaatcttgtgctggcagcatacaattgc
ggtcccggaaccatcaacaaggctatccgccgcgccggaggagctaccgacttctggact
atttacaattacttgcctaaagaaaccagaggatacgtacctgccttcattgctgcaaac
tatatcatgacttactattgtgagcataacatcagcccgatggatatgaacatgccggaa
ggaacagatacgatccatatatcccgcaatctgaatctcaatcaggttgccggtgtctgc
aacatcaatatcgaccagcttcgggcactgaatccggaattcaagaaagatattattccc
ggcaacgaggaaccctatgcgcttcgtctgcccaataacatgatcagttgttttattgaa
cacgaagacagtatctacaattacaagcccgaagtatatcagacccgccgcagtacggta
gaagtcaaggatccggcaggaacctccacagggaaagccgtttactaccgcatcaaaaat
ggagataccctgggaggaattgctgctaaatatggtgtcagtgtcaaccagcttcgacgg
ttgaacggcataaaaggcagcagcatccgtgccggaaagtccatccgtatccgataa
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