Phocaeicola coprophilus: I6J50_13295
Help
Entry
I6J50_13295 CDS
T07209
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pcop
Phocaeicola coprophilus
Pathway
pcop00470
D-Amino acid metabolism
pcop00550
Peptidoglycan biosynthesis
pcop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I6J50_13295 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I6J50_13295 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcop01011
]
I6J50_13295 (murD)
Enzymes [BR:
pcop01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
I6J50_13295 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pcop01011
]
Precursor biosynthesis
Amino acid ligase
I6J50_13295 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD_N
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
QRO23975
LinkDB
All DBs
Position
3125759..3127093
Genome browser
AA seq
444 aa
AA seq
DB search
MAKRIVILGAGESGAGAAVLAKKQGFDTFVSDMSQIKDKYKKMLDERDIPWEEGHHTESL
ILNADEVIKSPGIPNDAPLILKLKEQGTPIISEIEFAGRYTQAKMICITGSNGKTTTTSL
IYHIFKKAGLNVGLAGNIGQSLAFQVAKCNYDYYVIELSSFQLDNMYKFHANIAVLMNIT
PDHLDRYGYQMQNYVDAKFRIIQNQTDADAFIFWNDDPVIQRELHKYGIHGHYYPFAEKR
EEGLAAFVEENKVYFTEPIAFNMEQEELALTGTHNLFNSMAAGISANIAGIRKECIREAL
NDFKGVEHRLEKVCRVRGVEYINDSKATNVNSCWYALQSMKTKTVLILGGKDKGNDYNEI
ADLVREKCSGLIFMGLHNEKLHDFFDGFGLPIVDVQSMKDAVDAAYQMAKKGETVLLSPC
CASFDLFKSYEDRGDQFKKYVREL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagaattgtcatattaggagctggtgaaagcggcgcgggagctgccgtactg
gcaaagaaacaaggcttcgatacctttgtatcagacatgtcccaaatcaaggacaagtat
aagaagatgttggatgaaagagacattccatgggaagaaggccatcacacggaaagtctt
atcctgaatgccgatgaagttatcaagagtcccggcattcccaatgatgcacctctgatt
ctgaaactgaaagaacaaggtacacccattatctcagaaattgaatttgccggccgatat
acgcaggcaaagatgatttgtatcacaggcagtaatggcaagacgacgacaacctcactg
atttatcacatctttaaaaaggcaggactgaacgtcggactggccggcaatatcggacag
agccttgcttttcaggtggcaaaatgcaattatgactattatgtcattgaattaagcagt
ttccaactggataacatgtacaaattccatgctaatatcgccgtgctgatgaacattacg
cccgatcatctggaccgttacggatatcagatgcaaaactatgtagatgccaagttccgc
attatccagaaccagaccgatgctgatgcatttatcttctggaatgacgacccggttatc
caacgggaattgcacaaatacggcatacacggccattattatccattcgcagaaaaaaga
gaagaaggactggctgctttcgtggaagaaaacaaggtctatttcacggaaccgatagct
ttcaatatggaacaggaagaattggctcttacgggtacacataacctgttcaattccatg
gctgctggaatctctgccaatatcgcaggtatacggaaagaatgtatccgtgaagcgttg
aacgacttcaagggagtggagcaccgcctggaaaaagtttgccgcgtacgaggagtagaa
tacatcaacgactccaaagcaacaaatgtcaactcttgctggtatgccctgcaaagcatg
aagaccaaaacggttctcattctgggaggaaaggacaagggtaacgactataatgaaata
gctgatctggttcgggaaaaatgttccggtctgatcttcatgggactgcataatgagaaa
ctgcacgacttcttcgacggtttcggattgccgattgttgacgtacaaagcatgaaagat
gcagtcgatgcagcctaccagatggctaagaaaggtgaaaccgtcctgcttagcccctgc
tgcgcaagtttcgacctgttcaaaagttatgaggacagaggcgaccagtttaaaaaatac
gtaagagaactctaa
DBGET
integrated database retrieval system
