Phocaeicola coprophilus: I6J50_14230
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Entry
I6J50_14230 CDS
T07209
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pcop
Phocaeicola coprophilus
Pathway
pcop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I6J50_14230 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcop03400
]
I6J50_14230 (priA)
Enzymes [BR:
pcop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6J50_14230 (priA)
DNA repair and recombination proteins [BR:
pcop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I6J50_14230 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
Cas3-like_C_2
nSTAND3
Zn_ribbon_6
DUF1272
AAA_30
IBR_1
Motif
Other DBs
NCBI-ProteinID:
QRO24133
LinkDB
All DBs
Position
complement(3312094..3314556)
Genome browser
AA seq
820 aa
AA seq
DB search
MKKYVDVIVPLPIAGQYTYSLPEGWDEKVKEGCRVVVPFGRKKYYTAIITKVHETPPEEY
ETKDVAEILDERPVLLARQYAFWKWMADYYLCTLGDVYKAALPSGMKLESETVVVYNPDF
EAVEPLTEREQSVMNLLSSETEQCITQLEKSSGIRQILPVIKSLLEKEAVKVKEELKRSY
KPRTEARVRLTPGMQDEEKLRGLFDGLARAPKQLAVLMKYIELSGWGTSGTDLKEVTRKS
LLEASGASSAILNGLTGKGIFELYYQEVGRLAKGVCNTVSLNPLNPAQQQAYYSVLSLFA
TKNVCLLHGVTSSGKTEIYIHLIDQVLKSGKQVLYLLPEIALTTQITERLKRVFGNRLGI
YHSKFPDAERVEIWQKQLSEQDYDVILGVRSSVFLPFRRLGLVIVDEEHETTYKQQDPAP
RYHARSAAIMLASMFGAKTLLGTATPSIETYYNARQGKYGLVELTERYQNIRLPQIELVD
IKELARKKRMTAQFSPLLLQKIREALEHKEQVILFQNRRGFAPMIECRTCGWVPRCRNCD
VSLTYHKGMNQLTCHYCGYTYQVPKSCPACGGVELVNRGFGTEKIEDDIRTVFPEARVAR
MDLDTTRTRTAYERIIADFEEGKTDILIGTQMVSKGLDFDRVSVVGILNADSMLNYPDFR
SYERAFQLMAQVAGRAGRRNKQGLVVLQTKSPDLPLIHQVMANDYFRMYSEQLEERELFK
YPPFYRLVYVYLKHWKEDVLDQAAELMASCLRKGLGERVLGPDKPPVSRIQTLFIKKIVV
KIELDASLVKVRAYLQQVQRFLTEDERFRSLLVYYDVDPM
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatatgtggatgtcatagtgcctttaccgattgccggtcaatatacctattct
cttcccgaaggctgggatgaaaaggttaaggagggatgccgtgtggtggttcctttcggt
cggaagaagtattatacagccattataaccaaagtacatgagactcctcccgaagagtat
gagaccaaggatgtagcagagatcctggatgaacgtcctgtcctgctggcccggcagtat
gctttctggaaatggatggctgactactatttgtgtacattgggagatgtatataaagcg
gctcttccttcgggcatgaagctggagagtgagactgtcgttgtatataatccggacttt
gaggcagtggagcctttgacggaaagagaacagagtgtgatgaatctgttgtcttccgaa
acggaacagtgcattacgcaactggaaaagtcaagtggcattcgccagatcctgccggtt
atcaaatccctgctggagaaagaagctgtcaaagtaaaggaggaactgaagcgcagttac
aaaccacgcaccgaagcacgcgtccggcttactccgggtatgcaggatgaagaaaagctc
cgaggactgtttgacggattggcaagagctcccaaacagctggcggtgcttatgaaatac
attgaattgtccggttggggaacttcgggaacagatttgaaagaggttacccgtaagtct
ctgcttgaggcatccggtgcttcttctgccatattgaatggcttgaccggcaaaggtatt
tttgaattatactatcaggaagtgggccgtctggcaaagggagtatgcaatacggtctct
ttgaatcctttgaatccggcgcagcagcaagcttattattctgttctttctttatttgct
acgaagaatgtatgtcttttgcatggagtaacatcgagcggaaagacagaaatctatatt
catttgattgatcaggtattgaaatccgggaagcaggtgctttatctgttgccggagatt
gccctgacaacccagataacggaacgcctgaaacgggttttcgggaaccggctgggaatc
tatcattctaagtttccggatgcggaacgggtggagatctggcagaaacagttgtcggaa
caagattatgatgtcattctgggtgtccgttcgtctgtgtttcttccgttccgtcgtttg
ggacttgtcattgtggatgaggaacacgaaacaacttataagcagcaggatccggctcca
cgttatcatgcccggagcgcggctattatgctggcttccatgttcggagcaaaaaccttg
ttaggtacggcaacaccttccatagagacttattataatgcccgacaggggaaatatggt
ctggtagagcttacggagcgttaccagaatatccgtctgccacaaatcgagctggttgat
atcaaggaactggcacgtaaaaaaagaatgacggcgcagttttctcccttgctcctgcaa
aagatacgtgaagccttggagcacaaggagcaggtaattttgtttcagaaccggcgtggt
tttgcaccgatgattgaatgccgcacttgcggatgggttccccgttgccggaactgcgat
gtcagtctgacttatcataaagggatgaatcagttgacctgccattattgtggttatacg
tatcaggttcctaaatcgtgtccggcctgcggaggtgtggaactggtgaaccggggattt
ggtacggaaaagattgaagacgatatacggactgtattcccggaggcccgggtggcacgg
atggatctggatacgactcgtacccgtaccgcttatgaacggatcattgcggattttgaa
gaagggaagacggacattctgatcggtacccagatggtgtcaaaaggactggatttcgat
cgggtaagtgttgttggaattctgaatgcagattccatgttgaactatccggatttccgt
tcctatgaacgtgctttccagctgatggcccaggtagccggacgtgccgggcgaagaaac
aagcagggacttgtagttctgcagaccaagtctccagatcttccgctgattcatcaggta
atggccaatgactatttccgtatgtacagtgaacagctggaagaacgggaacttttcaag
tatcctcctttttatcggttagtttatgtatatttgaagcactggaaagaagatgtgctt
gatcaggctgccgaactgatggcttcctgcctgcgtaaaggtttgggggagagggtactg
gggccggataaaccgcctgtatcccgtattcagacgcttttcatcaagaagatagtggtg
aagatagaactggatgcatctttggtcaaagtacgggcttatcttcagcaggtgcagcgc
ttcctgacagaagatgaacgtttccgctccttattggtatattacgatgtcgatcccatg
tag
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