Phocaeicola coprophilus: I6J50_16215
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Entry
I6J50_16215 CDS
T07209
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
pcop
Phocaeicola coprophilus
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcop03032
]
I6J50_16215
03036 Chromosome and associated proteins [BR:
pcop03036
]
I6J50_16215
03400 DNA repair and recombination proteins [BR:
pcop03400
]
I6J50_16215
DNA replication proteins [BR:
pcop03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I6J50_16215
Chromosome and associated proteins [BR:
pcop03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
I6J50_16215
DNA repair and recombination proteins [BR:
pcop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
I6J50_16215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QRO24489
LinkDB
All DBs
Position
3777649..3777930
Genome browser
AA seq
93 aa
AA seq
DB search
MTKADIVREIATQTGLEKQVVLQVVEGFMDSVKSSMINGEEVYLRGFGSFIIKHRAEKTA
RNISRNTTIIVPAHNIPAFKPSKAFAGRMKSDK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagcggatatcgtcagggaaatagcaacgcagaccggtctggagaagcaggtc
gtgttacaagttgtcgaaggattcatggatagcgtaaagtcttccatgataaacggcgag
gaggtttatcttcgcggcttcggttcttttatcatcaaacaccgtgcggaaaagacagca
cgcaacataagcaggaataccacgataatagtgcctgcccacaatatcccggcattcaaa
ccgtcaaaagcctttgcaggaaggatgaaatcagacaaataa
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