Propithecus coquereli (Coquerel's sifaka): 105805306
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Entry
105805306 CDS
T08746
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03082
ATP-dependent chromatin remodeling
pcoq04714
Thermogenesis
pcoq05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105805306 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
105805306 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
105805306 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoq03021
]
105805306 (SMARCC1)
03036 Chromosome and associated proteins [BR:
pcoq03036
]
105805306 (SMARCC1)
Transcription machinery [BR:
pcoq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105805306 (SMARCC1)
Chromosome and associated proteins [BR:
pcoq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105805306 (SMARCC1)
PBAF complex
105805306 (SMARCC1)
GBAF(ncBAF) complex
105805306 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
LIM_FHL2-3_N
SpeFL
Motif
Other DBs
NCBI-GeneID:
105805306
NCBI-ProteinID:
XP_012493667
Ensembl:
ENSPCOG00000017575
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MAAAAGGGGPGAAAGAAGSGAPAAAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPNIYLIPDIDLKL
ASKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHVKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRI
STKNEECGKCQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSEN
TPVKGGTVADLDEQDEETVTTGGKEDEDPSRGDQSRSVDPGEDNVTEQTNHIIIPSYASW
FDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTG
DVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVP
AAQQMLNFPEKNKEKPIDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEM
YKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMS
TVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGL
ESSCIAGTGPDEPEKLEGAEEEKMEADPDGQQSEKAENKVENETEEGDKAQDRENEKNNE
KEQQDSEVSEDTKSEEKETEESKEFTDACKERERESDIGKKKVEHEISEGNVATAAAAAL
ASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQ
LLTERQNFHMEQLKYAELRARQQMEQQQHGQNPQQSHQHSGGPGLAPLGAAGHPGMMPHQ
QPPPYPLMHHQMPPPHPPQPGQIPGPGSMMPGQPLPGRMISTVAANIHPSGSGPTPPGMP
PMPGNILGPRVPLTAPNGMYPPPPQQQPPPPPSADGVPPPPAPGPPASAAP
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcagcgggcggcggcgggccgggagcggcagcgggcgccgcgggctcgggg
gctccggcagcggccgcgggcctggccgtttatcggcggaaggacggtggcccggccagc
aagttttgggagagccctgagacggtgtctcagctggattcggtgcgggtctggctgggc
aagcactataagaagtatgttcatgcggatgctcctaccaataaaacgctagctgggctg
gtggtgcagcttctccagttccaggaagatgcctttgggaaacatgtcaccaacccagcc
ttcaccaaactccctgcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac
attcttggagctgcttacaagtataaaaatgaacagggatggcggagattcgacctacag
aatccgtcccgaatggatcgtaatgttgaaatgtttatgaatattgaaaaaacattggta
cagaacaactgtctgtccagaccgaacatctacctcattccagacattgatctgaaattg
gctagcaaattgaaagatatcatcaaacgacatcaggggacatttactgatgagaaatca
aaagcttcccaccatatttatccatattcttcctcacaagaggatgaagaatggttgaga
ccagtgatgagaaaagacaagcaggtgttagtgcactggggcttttacccagacagttat
gatacttgggtccatagtaatgatgttgatgctgaaattgaagatccaccaattccagaa
aaaccatggaaggttcatgtgaaatggattttggacactgatattttcaacgaatggatg
aatgaggaagattatgaggtggatgagaacaggaagcctgtgagttttcgtcagcgaatt
tcaacaaagaatgaagagtgtggcaagtgccaagctagtctttacgggaagcgcagaagt
cagaaagaggaagatgagcaagaagatctcaccaaggatatggaggacccaacacctgta
cccaatatagaggaagtagtacttcccaaaaatgtgaacccaaagaaagatagtgaaaat
acacctgttaaaggaggaactgtagcagatctagatgagcaggatgaagaaacagtcaca
acaggaggaaaggaagatgaagatcctagcagaggtgatcagagtcggtcagttgaccct
ggagaagataatgtgacagagcagaccaatcacattattattcccagctatgcatcatgg
tttgattataactgtattcatgtgattgaacgacgtgctcttcctgagttcttcaatgga
aaaaacaaatccaagactccagaaatatacttggcgtatcgaaattttatgattgacaca
taccgccttaacccccaagagtatttaaccagcactgcttgtcggaggaacttgactgga
gatgtgtgtgctgtgatgagggttcatgcctttttagagcaatggggacttgttaattac
caagttgatccagaaagtcgacccatggcgatgggacctcctcctactccacattttaat
gtattagctgataccccctctgggcttgtgcccctgcatcttcggtcacctcaggtccct
gctgctcaacagatgttaaattttcctgagaagaacaaggaaaaaccaattgatttgcag
aactttggtctccgtactgacatttactctaagaaaacattagcaaagagtaaaggtgct
agtgctggaagagaatggactgaacaggagacccttctactcctggaggccctggagatg
tacaaggatgattggaacaaagtgtcagaacatgttggaagtcgtactcaggatgaatgc
atcctccatttcttgaggcttcccattgaggacccgtaccttgagaattcagatgcttcc
cttgggcctctggcctaccagcctgttccctttagtcagtcgggaaacccggtcatgagt
actgttgcttttttggcatctgtggtggaccctcgtgtggcatctgctgcagcaaaagca
gctttggaggagttttctcgggtccgggaggaggtaccactggaattggttgaagctcat
gtcaagaaagtacaagaagcagcacgagcctctgggaaagtggatcccacttatggcctg
gagagcagctgtattgcaggcacagggcccgatgagccagaaaagcttgaaggtgccgaa
gaggaaaaaatggaagcagaccctgatggtcaacaatctgaaaaggcagaaaacaaagtg
gaaaatgaaacagaagaaggtgataaagcacaagatagagaaaatgaaaaaaacaatgag
aaggaacagcaggatagtgaagttagtgaggataccaaatcagaagaaaaggagactgaa
gagagcaaagaattcactgatgcatgtaaagaaagagaaagagaaagtgatatcgggaag
aagaaagtagaacatgaaatttccgaaggaaatgttgccacagccgcagcagctgctctt
gcctcagctgctaccaaagccaagcatcttgctgctgtggaagagagaaagatcaagtcc
ctagtagctctcctggttgagacacaaatgaagaaactagaaatcaaacttcgacatttt
gaggagctggaaactatcatggacagagagaaagaggctctggaacaacagagacagcag
ttgcttactgaacgccagaacttccacatggaacaactgaagtatgccgaattacgagcc
cgacagcaaatggaacagcagcagcatgggcagaaccctcaacagtcacaccagcactca
ggaggaccgggtttagccccacttggagcagcagggcatcccggtatgatgcctcatcag
cagccccctccctaccctctgatgcaccaccagatgccaccacctcatccaccccagcca
ggtcagataccaggcccaggttccatgatgcctgggcaacccctgccaggccgcatgatt
tccactgtcgcagccaacatccacccctctgggagtggccctacccctcctggtatgcct
ccaatgccgggaaacatcttaggaccccgggtacccctcacagcacctaacggcatgtat
ccccctccgccgcagcagcagccaccaccaccgccatctgcagatggggtccctccacct
cctgctccaggcccaccagcctcggccgctccttag
DBGET
integrated database retrieval system
