Propithecus coquereli (Coquerel's sifaka): 105805368
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Entry
105805368 CDS
T08746
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03013
Nucleocytoplasmic transport
pcoq03015
mRNA surveillance pathway
pcoq03040
Spliceosome
pcoq05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105805368 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
105805368 (NCBP1)
03015 mRNA surveillance pathway
105805368 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
105805368 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoq03019
]
105805368 (NCBP1)
03041 Spliceosome [BR:
pcoq03041
]
105805368 (NCBP1)
Messenger RNA biogenesis [BR:
pcoq03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
105805368 (NCBP1)
Spliceosome [BR:
pcoq03041
]
Common components
Common spliceosomal components
Cap binding complex
105805368 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Cob_adeno_trans
DUF2524
Motif
Other DBs
NCBI-GeneID:
105805368
NCBI-ProteinID:
XP_012493715
Ensembl:
ENSPCOG00000020024
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDGNETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANS
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEGPVMPGSHSVERF
VIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELFQLPAPPHIDVMY
ATLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHHLSNFQFRWSWED
WSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPANPTCIYKYGDESS
NSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFNPLKIEVFVQTLL
HLAAKSISHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQMIAVLVDKMIRTQ
IVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELEEAKEKLARQHKR
RSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLVRCETDG
TSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILAVFQQFCALQA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgatgagaacgatggtggacagcctcacaaaaggagaaag
acctctgatggaaatgaaactgaagaccatttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttggagagcaatctagaaggcttggctggtgttttagaagccgat
cttcctaactacaagagcaagatcttaaggcttctttgtacagttgcacgtctgttacct
gagaagttgacaatttatacaacattagttggactactgaatgccaggaattacaacttt
ggtggagaatttgtagaggctatgattcgtcagcttaaagaatcattgaaagcaaacagt
tacaatgaagctgtatatttggtccgttttttatctgatcttgtgaattgtcatgtgatt
gctgccccatcaatggtagctatgtttgaaaattttgtaagtgtaactcaggaagaagat
gtacctcaggtgcgacgggattggtatgtgtatgcatttctgtcatctttgccctgggtt
ggaaaggagttgtacgaaaagaaagatgcagagatggaccgcatctttgccaacactgaa
agctatcttaaaagacgccaaaagactcatgtgcccatgttacaggtatggactgctgat
aaaccacatccacaagaagagggtcctgttatgccaggaagtcattcagtggaaagattt
gtaatagaagagaatcttcactgcatcattaagtcccactggaaggaaaggaagacttgt
gctgcacagctagtgagctatccagggaagaacaagatccccttgaactaccacatagtt
gaggtgatctttgcagagctgtttcaactgccagcaccccctcacattgatgtgatgtat
gcaacacttctcattgaactctgcaaacttcagcctggctctctaccccaagttctggca
caggcaactgaaatgttatacatgcgtttggacacaatgaataccacatgcgtagacagg
tttattaattggttttctcatcatctaagtaacttccagttccgttggagctgggaagat
tggtcagattgtcttactcaagatcctgaaagtccgaagccaaagtttgtaagagaagtt
ctagaaaaatgtatgaggttgtcttaccatcagcgtatattagatattgttcctcctacc
ttctcagctctatgtcctgcaaacccaacctgcatttacaagtatggagatgaaagtagc
aattctcttcctggacattctgttgccctctgtttagcagttgcctttaaaagtaaggca
acgaatgatgaaatctttagcattttgaaagatgtaccgaatcctaaccaggatgatgat
gatgatgaaggattcagttttaacccattgaaaatagaggtctttgtacagactctgcta
catttggcagccaaatcaatcagccactccttcagtgctcttgcaaagtttcatgaagtc
ttcaaaaccttagctgaaagtgatgaaggaaagttacatgtgctaagagttatgtttgag
gtctggagaaaccatccacagatgatcgctgtactagtggataagatgattcgtacacag
attgttgactgtgccgcggtagcaaattggatcttctcttcagagctgtctcgtgacttt
actagattgtttgtttgggaaatcttgcactctacaattcgtaagatgaacaaacatgtt
ctgaaaatccagaaggagctagaagaagctaaagagaagcttgcaaggcaacacaaacgg
cgaagtgatgatgatgacagaagcagtgacaggaaagatggggctcttgaggagcaaata
gaaagactgcaggagaaagtggaatctgctcagagtgaacagaagaacctcttccttgtc
atatttcagcgttttatcatgatcttaactgagcacttagtacgatgtgaaactgacggg
accagtgttttaacaccatggtataagaactgtatagagaggctccagcagatcttccta
cagcatcaccagataatccagcagtacatggtgaccctggagaaccttctcttcactgct
gagttagaccctcatatcctggctgtgttccagcagttctgtgccctgcaggcctaa
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