Propithecus coquereli (Coquerel's sifaka): 105805419
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Entry
105805419 CDS
T08746
Symbol
USH2A
Name
(RefSeq) usherin
KO
K19636
usherin
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcoq03037
]
105805419 (USH2A)
Cilium and associated proteins [BR:
pcoq03037
]
Primary cilia and associated proteins
USH complex and associated proteins
105805419 (USH2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Galaxin_repeat
Fn3_VIN3
HpiC1-like
Motif
Other DBs
NCBI-GeneID:
105805419
NCBI-ProteinID:
XP_012493770
LinkDB
All DBs
Position
Unknown
AA seq
2711 aa
AA seq
DB search
MFNIVVDPEEQFFQYMEHFDSIQHMFSTVFSALIHLCFSTAPDGVLPPRLSSATPTSLQV
VWSTPARNNAPGSPRYQLQMRPGHSTHGFLELFSNPSASLSYEVRDLQPYTEYMFRLVAS
NGFGSAHSSWIPFTTAEDKPGPIDPPIALDVKSRMMLVTWQHPSKCNGVITHYNIYQHGH
LYLRTSGNVTNCTVTHLHPYTAYKFQVEACTSKGCSLSAESQTIWTHAEAPEGIPCPELF
SDTPTSVIISWQPPTHPNGLVENFTIERRVKGKEEVTTLATLPRSHSMRFIDKTPALSPW
TRYEYRVLMSTRDGGTNSSAWAEVTTRPSRPAGVQPPVVTVLGPEAVQVTWKPPLIQNGD
MLSYEIRMPDPHITITNVTSSVLSQIITHLIPFTNYSVTIVACSGGDGHLGGCTESLPTY
VTTHPTLPQGVGPLSAIPLSESYVGISWQPPSKPNGPNVRYELLRRKIQQPLASNPPEDL
NLWHNIYSGTQWFYEDKGLSRFTTYEYKLFVHNSVGFTPSREVTVTTLAGLPERAANLTA
SVLNHTAMEVSWTKPSFQDLQGDVEYYTLFWSSATSNESLKVFPDVNSHVIDSLNPNTEY
RVFISVFNGVHSINSAVLKATTCDGEPQGMLPPEVVIINSTAVRVIWTSPSNPNGVVTEY
SIYVNNKLYKTGMNVSGSFILRDLSPFTIYDIQIDWVSPGKPNGIIRGYDLLRKTLYSCP
KTQKDHSDELCKAVRCQKPKNICGHICYSPEAKVCCNGVLYDPRPGHHCCEDKYIPLALN
STGVCCGGRIQEAQPHHQCCFGYYARILPGEVCCPDEQHNRVSIGIGNSCCGRMPYSTSG
NQICCAGRLHDGHGQQCCGGQIVSKDLECCGGEEGVVYSRLPGMFCCGQDYVNMSDTICC
SASSGESKAHVKKNDPVPVKCCETELIPKSQRCCNGVGYNPLKYVCSDKISTGMMMKETK
ECRTLCPASMEASAYCGRCDFNFTSHVCTVMRRSHNSTGKTSIEEMCSSAEETVHTGSVN
TYSFTDVNLKPYTLYEYRISAWNSYGRGFSKAVRARTKEDVPQGVSPPRWTKMDNLEDAI
VLNWKKPIQSNGPIIYYILLRNGIEHFRGTSLSFSDTKGIQPFQEYSYQLKACTVAGCAA
SSKVVAATTQGVPESILPPRITAPSAEALHLSWSVPEKPNGVIKEYQIRQVGKGLIYTDT
TDRRQHTVTGLQPYTNYSFTLTACTSAGCTSSEPFLGQTLQAAPEGVWMTPRHIIINSTT
VELYWSLPEKPNGLISQYQLSRNGTLLFLGGSEEQNFTDKNLEPNSRVKTNLVKYYKGIL
IPQIPVEYNVLLSDGSVTFLVFSVGHLQSTLLENLTPFTQYEIRIQACQNGSCGVSSKMF
VKTSEAAPLDLNSPVLKALGSACIEVKWMPPKKPNGVIINYFIHRRPAGTEEESLLFIWS
EGALGFTDISDTLRPFTFYEYRVRARNSRGSVESLWSSARTLEAPPQDFPAPWAQATSAH
SVLLNWTKPESPNGIISQYRVVYRERPDDPTFNSSTIHAFTVTGTSHQAHLFGLEPFTKY
HIGVVAANQAGEVSSPWALVQTLESSPSQLSNFTVEQKENGRALLLQWSEPARPNGVIKT
YTIFSDGTLEYTGLNRQFLFRRLEPFTLYTLTLEACTGAGCAHTAPQPLWTDEAPPDSQL
PPTIQSVEATSVELSWSEPVNPNGKIIRYEVIRRCFEGKAWGNQTIQADEKIVFTEYNTE
RDTFLYNDTGLQPWTQCEYKIYTWNSAGHTCSSWNVVRTLQAPPEGLSPPEISYVSMNPP
KLLISWIPPEQSNGIIQSYRLQRNGMLYPFGFDAVTFNYTDEELLPFSTYSYAVLACTSG
GCSTSKPTSITTLEAAPTGVSPPDLWAISATQINVSWSPASSQNGKITKYLLRYDGKEFF
AGQGLTLLASHLQPYTQYNFSLVACTNGGCTASKSKSAWTMEAPPENMDSPTLQVTGSES
IEITWKPPRNPNGQIRSYELRRDGTIVYTGLETRYHDFTLTPGVEYGYTVMANNSQGGIL
SPLVKERTSPSAPSGMEPPKLQAKGPQEILVNWDPPVRTNDDIINYTLFIRELFERETKI
IHINTTHDSFDTQSFIVNQLKPFHRYEIRIQACTPLGCASSEWASAQTSEMAPLMQPPPH
LEVRMAPGGFRPTVSLWWTGPVQPNGRVLYYELYRRQIAPRPGQSNPVLTYNGSSSSFTD
SELWPFTEYEYQVWAVNSAGKAPSRWAWCRTGPAPPEGLRAPRFHAVSSTQAVVNISAPE
TPNGIVSLYRLFSSNTSGAQTVLSEGMASQQTLHGLQPFTTYSIGVEACTCFNCCSKGPT
AELRTHPAPPSGLSSPQIQALSSRTASFQWSPPLFPNGIIQSYELQLHVACSPESALPCT
PSETETKYTGPGQTASLGGLQPFTTYKLRVVAHNEVGSTASGWISFTTQRELPQYRAPFS
VDSNLSTVCVNWTGSFLLNGPLKEYVLTDGGQRVYSGFDTILYIPRTADKTFFFQVTCTT
DEGSVKTPLIQYDTSAGFGLVLTTPGEKKGSGSKSPEFYNELWFIVLMAMLGLVLLAIFL
SLILQRKIHKEPFIRERPPLVPLQKRMSPLSVYPPGENHTGLADTKIPRSGTPGSIRSNR
SVSVLRIPSQSQISQTYSQGSLHRSVSQLMDIQDKKVLTDDSLWETIMGHNSGLVPARVP
LGQLDHEQIAS
NT seq
8136 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacattgttgttgatcctgaggaacagtttttccagtatatggagcatttcgat
tccatccagcatatgttctccacagttttctctgctctaattcatctgtgtttttcgaca
gctccagatggcgtgctgcctcccaggctttcatctgccactccaaccagtcttcaggtt
gtctggtctacaccagctcgtaacaacgctcccggctctcccagataccagctccagatg
aggcctggccactccacccatgggtttctagagttattttccaatccttctgcatcgtta
agctacgaagtgagagatctccaaccatacacggagtatatgtttcggttggttgcctcc
aatggatttggcagtgcacatagttcttggattccattcacgaccgcagaggacaaaccg
ggacccatagaccctccgattgctctggacgtgaagtcgagaatgatgttggtcacctgg
cagcatccttcaaagtgcaatggggttattacccattataacatttatcagcatggccat
ctatacttgagaacttctggaaatgtcactaactgcacagtgacccacttacacccgtat
actgcctataagtttcaggtagaagcctgtacttcaaaaggatgttccctctcagcagag
tcccagaccatatggacacacgcagaggcaccagaagggatcccatgtccagagctgttc
tctgacactcccacatctgtgattatatcttggcaaccccccacccatcccaacggctta
gtggagaacttcacaattgagagaagagtcaaagggaaagaagaagttactaccctggcg
actcttccaagaagtcattccatgaggtttattgacaagactcctgccctcagcccatgg
acaagatatgaataccgagtcctgatgagcactcgtgatggaggtacaaacagcagtgct
tgggcagaagtgaccacaagaccctcacgacctgctggggtgcagccgcccgtggtgacc
gtgctgggacctgaggcagtccaggtcacttggaaacccccactcatccagaacggagac
atgcttagctatgagatccgcatgcctgaccctcacatcacaataaccaatgtgacttcc
tcagtgttaagtcaaataattacacatcttattcctttcactaattattctgtcaccatt
gttgcttgctcagggggggatggacacctaggagggtgcacagagagtttacctacctat
gttaccacccacccaaccctaccgcagggtgttggcccattgtcagcgattccactaagt
gaatcgtatgttgggatttcttggcagccgccatccaagccaaatggacccaatgtgaga
tatgagcttctgagacgtaaaatccagcaaccacttgcatcaaatcccccagaagattta
aatctgtggcacaatatttattcaggaactcagtggttttatgaagataagggtcttagc
agatttacaacctacgagtataaactgtttgtacacaacagcgtggggtttacgccaagc
cgggaagtgaccgtgactacgttagctggtcttccagagagagcagccaatctcacagcg
agtgttcttaaccacacagccatggaagtgagttggactaagccaagttttcaagaccta
caaggtgatgttgaatattatacacttttttggagttctgctacctcaaatgaatctctt
aaagtcttcccagatgtaaactcacatgtcattgacagcttaaatccaaacacagagtat
cgggtttttatctctgtcttcaatggagtccacagcatcaacagtgcagtactgaaggcc
accacctgcgatggggagcctcagggcatgcttcctccagaggttgtcatcatcaacagt
acagctgtacgtgtcatctggacatctccttcaaacccaaatggcgttgtcactgagtat
tctatctatgtaaataataagctctacaagactggaatgaatgtgtctgggtcgtttatt
ctgagagacctgtctcctttcactatctatgacattcagattgattgggtgtctccaggg
aagccaaatggcatcattcgtggatatgatctcttacggaaaacattatattcatgccct
aaaactcagaaggaccacagtgatgagctctgcaaggctgtgagatgtcaaaaacctaaa
aatatctgtggacacatttgctattctcctgaagctaaggtttgttgtaacggagttctc
tatgacccccggcctggacaccactgttgtgaagacaagtatattccacttgctctgaat
tcaactggagtttgctgtggtggccgaatacaagaggcacaaccacatcatcagtgctgc
tttgggtattatgccagaattctaccaggtgaagtatgctgtccagatgaacagcacaat
cgggtttccattggcataggcaactcctgctgtggcagaatgccgtactccacctcagga
aaccagatttgctgtgctgggaggcttcatgatggccacggccaacagtgctgtggcgga
cagattgtgagcaaagatttagagtgctgcggtggagaagaaggtgtggtgtacagtcgc
cttccagggatgttctgttgtgggcaggattatgtgaatatgtcagataccatatgctgc
tcagcttccagtggagagtctaaagcacatgttaaaaagaatgacccagtgccagtaaaa
tgctgtgagactgaacttattccaaagagccagagatgctgtaatggagttggatataat
cctttgaaatatgtttgctctgacaagatttcaactggaatgatgatgaaggaaaccaaa
gagtgcaggaccctctgcccagcatctatggaagcctcagcatactgtggcaggtgtgac
ttcaactttaccagccatgtttgtactgtgatgagaaggtctcacaattccacagggaag
acatcaatcgaagaaatgtgttcatccgctgaagaaactgttcacacagggagtgtaaac
acatactccttcacagatgtaaacctcaagccctacacgttgtatgagtacaggatttct
gcatggaatagctatgggcgaggattcagcaaagctgttagagccagaacaaaagaggat
gtgcctcagggagtgagtccccctaggtggaccaaaatggacaatcttgaagatgcaatt
gtcttaaactggaaaaaacctatacaatcaaatggccctattatttactacattcttctt
cgaaatggaattgaacactttcggggaacatcactgagcttctctgatacaaaaggaatt
cagccatttcaggaatattcatatcagctgaaagcttgtacagttgctggctgtgctgcc
agtagcaaggtagttgcagctactacccaaggagttccggagagcatcctgccaccgcga
atcacagccccgagtgcagaggctctgcatctgagctggagtgtccctgagaaaccaaat
ggcgtcattaaagagtaccagatcaggcaggttgggaaaggtctcatctacactgacacc
actgacaggaggcagcatacggtcacaggtctccagccatacaccaactacagcttcaca
cttacggcttgtacatctgctggatgtacttccagtgagccttttctaggtcagacgctg
caggcagcccctgaaggagtttggatgacacctcgacacattatcatcaattctacaaca
gtggagttatattggagtctgccagaaaagcccaacggcctcatttctcaatatcaattg
agtcgtaatggaaccttgcttttcctgggtggaagtgaggagcagaatttcactgataaa
aacctggagcccaacagcagagtaaagacaaacttagttaaatactacaaagggatcctt
atcccccaaattcccgtggagtacaatgtcttactcagtgatggaagtgtaacatttctg
gtcttctctgttggtcatcttcagtctacccttctggaaaatttgactccattcacacag
tatgagataaggatacaagcatgtcaaaatggaagttgtggagttagcagtaaaatgttt
gtgaaaacatctgaagcagccccattggatcttaattcccctgttcttaaggcgttgggg
tcagcttgcatagaggttaaatggatgccacctaaaaaaccgaatggagtcatcatcaac
tactttattcacagacgtcctgctggcactgaagaggagtctttgttgttcatctggtca
gaaggagcccttggatttactgatatttcagacactctaaggcctttcacgttctacgaa
tatcgagtcagagcccgtaactccagaggctcagtagaaagcctgtggtcgtcagcacgg
actctggaagccccacctcaagattttccagctccttgggctcaagccaccagtgctcat
tcggttctgctgaactggacaaagccagaatctcccaatggcattatctcccagtaccgc
gttgtctaccgggagagaccagatgacccgacattcaacagctctactatacatgctttc
acagtgacgggaacaagccatcaggcccacctgtttgggctggaaccattcacgaaatat
cacattggtgtcgtggccgcaaaccaggcaggagaagtttcaagtccctgggctctggtt
caaaccttagaatcttccccaagtcaactgagcaactttacagtggaacagaaggagaat
ggccgtgcattgctactccagtggtcagagcctgccagacccaatggtgtgattaagaca
tacaccatcttcagcgacggcaccctggagtacactggcttgaatcgtcagtttcttttc
cgccgcctggagcctttcactctctacaccctcaccctggaggcctgcaccggggcgggc
tgtgcacacacagcaccccagcccctgtggacagatgaagcccctccggactcgcagttg
cctcccacaatccagtccgtggaggccaccagcgttgagctgagctggtcggagcctgtt
aacccaaatggaaaaataattcgctatgaagtgattcgcagatgcttcgagggcaaagct
tgggggaatcagacaatccaggccgatgagaaaattgttttcacagaatataatactgaa
agggacacatttctgtataacgacacgggtttgcaaccatggacgcagtgtgaatataaa
atctatacttggaattcagcagggcatacctgtagctcttggaatgtagtaaggacgttg
caagcacctccagaaggtctctctccacctgagatatcctatgtatctatgaatccccca
aaactgctgatttcctggatcccaccagaacaatctaatggcattatccagtcttatagg
cttcaaaggaatggaatgctctatcctttcggctttgatgctgtgactttcaattatact
gatgaagagctgcttcctttttccacctatagctatgcagtcctagcctgcaccagtgga
ggctgctccaccagcaaacccaccagcatcacaactctggaagctgctccaacaggagtc
agccctccagatctctgggccatcagtgccactcaaataaatgtatcttggtcaccagca
tcaagtcagaatgggaagatcactaaatatttgcttagatatgatggtaaggagtttttt
gctggacagggcctaaccctgttggcttcccacctgcagccctatacacagtataatttc
tcccttgtagcctgcacaaatggaggttgcacagctagtaagtcaaaatccgcttggaca
atggaggccccaccagagaacatggactccccaacgttgcaagtcacaggctcagaatca
atagaaatcacctggaaacctccaagaaacccaaatggccagatcagaagttatgaactt
aggagagatggaaccattgtatatacaggcctggaaactcgctatcatgattttaccctc
accccaggagtagagtatggctacacagtgatggccaacaacagccaagggggtattttg
agtccgctcgtcaaagagcgaaccagcccctcagcaccctcagggatggaacctccaaaa
ttgcaggccaagggccctcaggagatcttagtgaattgggaccctccagtgaggacaaat
gatgatatcatcaactataccctcttcatccgtgagctgtttgaaagagaaacaaaaatc
atacacataaacacaactcatgattcttttgatacacagtcattcatagtaaaccagctg
aagccatttcacaggtatgaaatacgaattcaagcctgcacccccctggggtgtgcttca
agtgaatgggcgtccgcacagacttccgagatggcgcctctgatgcagcctcctccacat
ctagaggtacggatggctccaggaggattccggcccactgtttccctttggtggacagga
ccagttcagccaaatggaagagttttatactacgaattatatagaagacaaatagcacct
cgacctggacaatccaatccagtgctaacctataatggaagctcaagctcctttacagat
tctgaactatggcctttcacagagtatgagtatcaggtctgggcagtgaattctgcagga
aaagcccccagtcgctgggcgtggtgtagaacggggccagcccccccagaaggtctcaga
gcccccaggttccatgcggtctcttccacccaagcagttgtcaacatcagcgcccccgag
acgcccaatggaatcgtcagtctctacaggttgttctccagcaacaccagcggggcccag
accgtgctgtccgaaggcatggccagccagcagactcttcatggcctacaacccttcacg
acctactccattggggtagaggcctgcacctgcttcaactgttgcagcaaggggccaacg
gctgagctgagaactcatccggctccaccctcaggactgtcctcaccgcaaatccaagca
ctgtcctcaaggacagcctccttccagtggagtccccctctgttccccaatggtatcatt
caaagctacgagctccaactccatgtggcttgctctcctgagtccgccctgccctgtact
cccagcgaaacagagacaaagtacacggggccagggcagacagccagccttgggggtctc
cagcctttcaccacctacaagctgagagtggtggcgcacaacgaggtgggcagcacagct
tctggatggatcagcttcaccacccaaagagaattgcctcagtaccgagccccgttttca
gtggacagcaatttgtctacggtgtgtgtgaactggacgggctccttcctcctgaacggc
ccgctgaaggagtacgtgttaaccgatggaggacaacgcgtgtacagtggcttcgacacc
atcctctacataccgaggacggcggacaaaaccttttttttccaggtcacctgcactaca
gatgaaggaagtgttaagacaccattgatccaatatgatacctctgctggatttggcttg
gtgctaacaactcctggagaaaagaagggatcggggagcaaaagcccagagttctacaac
gagctgtggtttatagttttaatggcgatgctgggcttggtcttgttggccatttttctg
tccctgatactacaaaggaaaatccacaaagaaccatttatcagagagagacctcccttg
gtgcctcttcagaagaggatgtctccactgagtgtctacccacccggggaaaaccatacg
ggattagccgataccaagattccccggtctgggacacctgggagtattcggagcaatcgg
agtgtgtctgtgctgcgaatcccaagtcaaagccaaattagccaaacctactcccaaggc
tctctccaccgcagtgtcagtcagctcatggacattcaagacaagaaagtcttgactgac
gactcactctgggaaaccatcatgggccacaatagcggactggtgcccgccagagtgcca
ttgggccagttagatcatgagcagatagccagctaa
DBGET
integrated database retrieval system
