Propithecus coquereli (Coquerel's sifaka): 105805556
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Entry
105805556 CDS
T08746
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq04151
PI3K-Akt signaling pathway
pcoq04510
Focal adhesion
pcoq04512
ECM-receptor interaction
pcoq04974
Protein digestion and absorption
pcoq05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
105805556 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105805556 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105805556 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
105805556 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
105805556 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcoq00536
]
105805556 (COL2A1)
Glycosaminoglycan binding proteins [BR:
pcoq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105805556 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
105805556
NCBI-ProteinID:
XP_012493930
Ensembl:
ENSPCOG00000020574
UniProt:
A0A2K6FU54
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRLGASQTLVLLTLLIAAVLRCQGQDVQEAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDVKDCLNPEIPFGECCPICPTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRAGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGAPGRAGDPGLQGPAGPPGEKGEPG
DDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGETGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAG
PTGKQGDRGESGAQGPMGPSGPAGARGLPGPQGPRGDKGESGEPGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGTPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAAGSLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPASVPKKNWWSSKSKEKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEVAGNLKKALLIQGSNDVEIRAEGNSRFTYTTLKDGCTK
HTGKWDKTVIEYRTQKTSRLPIIDIAPMDIGGPEQEFGVDIGPACFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggcttcccagacgttggtgctgctgacgctgctcatcgccgctgtc
cttcggtgtcagggccaggatgtccaggaggctggcagctgtgtgcaggatgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
accgtcctctgcgacgacataatctgtgaagatgtgaaagactgcctcaaccctgagatc
cccttcggagagtgctgccccatctgcccaactgacctcgccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaagga
cctcctgggcctcagggacctgcaggtgaacaaggacccagaggcgatcgtggtgacaaa
ggtgaaaaaggtgctcccggacctcgtggcagagatggagagcctgggacccctggaaat
cctggcccccctggtcctcccggcccccctggtccccctgggcttggtggaaactttgct
gcccagatggctggtggatttgatgagaaggctggtggtgcccagatgggagtaatgcaa
ggaccgatgggccccatgggacctcgaggacctccaggccctgctggtgctcctgggcct
caaggattccaaggcaatcctggtgaacctggtgaacctggcgtctctggtcctatgggt
cctcgtggtcctcctggcccccctggaaaacctggtgatgatggcgaagctggaaaacct
ggaaaagctggtgaaagaggccctcctggccctcagggtgctcgtggcttcccaggaacc
ccaggccttcctggtgtcaaaggtcacagaggttacccaggcctagatggtgctaaggga
gaagctggtgccccaggcgtgaagggtgagagtggttcccctggcgagaatggttctccg
ggcccgatgggtccccgtggcctgcctggtgaaagaggacgagctggacctgctggtgcc
gcgggtgcccgcggcaacgatggccagccaggccccgcagggcctccgggtcccgtcggt
cccgctggtggtcctggcttccctggtgcccccggagcaaagggtgaagctggccccact
ggtgcccgtggtcctgaaggcgctcaaggtcctcgtggtgaacctggtactcctgggtcc
cctgggcccgctggtgcctctggtaaccctggaactgatggaattcctggagccaaagga
tctgctggcgctcctgggattgctggtgctcctggtttccctggaccccgtggtcctcct
ggccctcaaggtgcaactggtcctctgggcccgaaaggtcagacgggtgaacctggtatt
gctggcttcaaaggtgaacagggacccaagggagaacctggccctgctggcccccaggga
gcccctggtcctgctggtgaagaaggcaaaagaggtgcccgtggagagcctggtggtgct
gggcccgttggtccccctggagaaagaggtgctcctggcaaccgtggcttcccaggtcag
gatggtctggcaggtcccaagggagcccccggagagcgagggcccagtggccttgctggt
cccaagggagccaatggtgaccctggccgtcccggagaacctggccttcctggagcccgg
ggtctcactggtcgccctggtgatgctggtcctcaaggcaaagttggcccttctggagcc
cctggtgaagatggtcgccctggacctccaggtcctcagggggctcgtgggcagcctggt
gtcatgggtttccctggtcccaaaggtgccaatggcgagcctggcaaagctggtgagaag
ggacttcccggtgctcctggtctgagaggtcttcctggcaaggatggtgagaccggtgct
gcaggaccccccggccctgctggacctgctggtgaacgaggcgagcagggtgctcctggg
ccatctgggttccagggacttcctggccctcctggtcccccaggtgaaggtggaaaacca
ggtgaccagggtgttcctggtgaagctggagcccccggcctcgtgggtcccaggggtgaa
cgaggcttcccaggtgaacgcggctctcccggtgcccagggcctccagggtccccgcggc
ctccctggcactccaggcactgacggtcccaaaggtgcatctggcccagctgggccccct
ggggctcagggtcctccaggtcttcaggggatgcccggcgagaggggagcagctggtatc
gctgggcccaagggagacaggggtgatgttggtgagaaaggcccggaaggagcccccgga
aaggacggtggacgtggtctgactggtcccattgggccccccggcccggctggtgccaat
ggtgagaagggagaagttggaccccctggtcctgcgggaagtgctggtgctcgaggcgcc
ccaggtgaacgtggggagactggaccccccggcccagctggattcgccggccctcccggt
gctgacggccagcctggtgccaagggtgagcaaggagaggccggccagaagggtgacgct
ggcgcccctggtcctcagggtccctctggagctcctgggcctcagggtcctactggagtg
actggtcctaaaggagcccgcggtgcccaaggccccccgggagccactggattccctgga
gctgctggccgcgttggacctcccggctccaatggcaaccctggaccccctggtcctcct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagtggcgcccccggccga
gctggtgaccctggcctccaaggtcctgctgggccccctggcgagaagggagaacctgga
gatgatggtccctctggtgctgatggtcctccaggtccccagggtctggctggtcagagg
ggcatcgttggcctgcctgggcagcgtggagagagaggattccctggcctgcctggccca
tcgggtgagcctggcaagcagggagcgcctggtgcttctggagacagaggtcctcctggc
cccgtgggtcctcctggcctgactggtcctgcaggtgaaactggacgagagggaagcccc
ggtgcagatggtccccctggcagagatggagcagctggagtcaagggtgatcgtggtgag
actggtgctgtgggtgctcccggagcccctgggccccctggctctcctggccctgccggc
ccaactggcaaacagggagacagaggagaatctggtgcacaaggccccatgggaccctca
ggaccagctggagcccggggactcccaggccctcaaggcccccgtggagacaaaggagag
tctggagaacctggcgagaggggcctgaagggacatcgtggcttcactggcctgcagggc
ctgcctggccctcctggtccttctggggaccaaggtgcttctggtcctgctggtccttct
gggcctagaggtcctcccggccccgttggcccctccggcaaagatggtgctaatggaatc
cctggccccatcgggcctcctggtccccgtggacgttcaggcgaaacaggccccgctggt
cctcctgggactcctggaccccctggccctccaggtccccctggccctggcattgacatg
tccgcctttgctggcctaggccagagagagaagggccctgaccccctgcagtacatgcgg
gctgaccaggcagccggctccctgagacagcatgatgccgaggtggatgccacactcaag
tccctcaacaaccagatcgagagcatccgcagccctgagggctcccgcaagaaccctgca
cgcacctgccgggacctgaaactctgccaccctgaatggaagagcggagactactggatt
gaccccaaccagggttgcaccttggacgccatgaaggttttctgcaacatggagactggc
gagacctgcgtctaccccaaccctgcgagcgtgcccaagaagaactggtggagcagcaag
agcaaggagaagaaacacatctggtttggggagaccatcaacgggggcttccacttcagc
tatggagatgacaacctggctcccaacactgccaacgtccagatgaccttcctacgcctg
ctgtccacagagggctcccagaacatcacctaccactgcaagaacagcattgcctacctg
gatgaagtagctggcaacctcaagaaggccctgctcatccagggctccaacgacgtagag
atccgggcagagggcaacagcaggttcacatacacgaccctgaaggatggctgcacgaaa
cacaccggtaagtgggacaagactgttatcgagtaccggacacagaagacctcacgcctc
cccatcattgacattgcacccatggacataggaggacctgagcaggaatttggtgtggac
atagggccagcctgcttcttgtaa
DBGET
integrated database retrieval system
