Propithecus coquereli (Coquerel's sifaka): 105805889
Help
Entry
105805889 CDS
T08746
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq01524
Platinum drug resistance
pcoq03430
Mismatch repair
pcoq05200
Pathways in cancer
pcoq05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105805889 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
105805889 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
105805889 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
105805889 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoq03400
]
105805889 (MSH2)
DNA repair and recombination proteins [BR:
pcoq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105805889 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_27
Motif
Other DBs
NCBI-GeneID:
105805889
NCBI-ProteinID:
XP_012494309
Ensembl:
ENSPCOG00000013918
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MAVQPKETLQLESAAEAGFVRFFQGMPEKPTTTVRLFDRGDFYTTHGEDALLAAREVFKT
QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKKADFSTKDIYQD
LNRLLKGKKGEQMNSTVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
RLDMAAVKALNLFQGSVEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKYEGKHQTLLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMNDLEKKMQSTLVSAARDLGLEPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSFNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHASNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDEVAFIPNDVYFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRVIGVCDQSFGIHVAELANFPRHVIECAKQKALELEEFQNIGES
QGYDEMEPAAKKCYLEREQSVPPVLSEEQWEAFAFHVTQQFSLLPEELCFVVSDSMKNMS
KFNVCQHMFALVCSLSKPKCPHASLIRPRRRFSSGENHMEVTDVGALNGLPRSYFWIW
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaagagacgctgcagctggagagcgcggccgaggccggcttcgtc
cgcttcttccagggcatgccggaaaaaccgaccaccacggtgcgcctcttcgaccggggc
gacttctacaccacgcacggcgaggacgcgctgctggccgctcgggaggtgttcaagacc
cagggcgtgattaagtacatggggccggcaggagcaaagaatctgcagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagatctccttctggttcgtcagtacagagtt
gaagtttataagaatagagctggaaataaggcatccaaggagaatgattggtatttggca
tttaaggcttctcctggcaatctatctcagtttgaagacattctctttggtaacaatgat
atgtcagcttccattggtgttgtgggtgttaaaatgtccacagttgatggccagaggcag
gttggagttgggtatgtggattccatacaaaggaagctaggactgtgtgagttccctgac
aatgatcagttctccaatcttgaggctctcctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactgctggagacatggggaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaaaggctgacttttccacaaaagacatttatcaggac
ctcaaccgattgttgaaaggtaaaaagggagaacagatgaatagtactgtgttgcccgaa
atggagaatcaggttgcggtttcatcattgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaattttggacagtttgaactgactacttttgacttcagccagtacatg
agactggatatggcagctgtcaaagccctaaaccttttccagggttctgttgaagatacc
agtggctctcagtctttggctgcattgctgaataaatgcaaaacccctcaaggacagaga
ctagttaaccagtggattaagcagcctctcatggataagaacagaatagaagagagatta
aatttagtggaagcttttgtagaagatgcagagttgaggcagagtttacaagaagattta
cttcgtcgcttcccagatcttaaccgacttgctaagaaatttcaaagacaagcagcaaac
ttacaagattgttaccgactctatcagggtataaatcaactccctaatgttatacaggct
ctggaaaaatatgaaggaaaacaccagacattattgttggcagtttttgtgactcctctt
attgatcttcgttctgatttctccaagtttcaggaaatgatagaaacaaccttagatatg
gaccaggtggaaaaccatgaattccttgttaaaccttcatttgatcctaatctgagtgaa
ttaagagaaataatgaatgatttggaaaagaagatgcagtcaacattagtaagtgccgcc
agagatctcggcttggagcctggcaaacagattaaactggattccagtgcacagtttgga
tattactttcgtgtaacgtgtaaggaagaaaaagtccttcgtaacaataaaaactttagt
acagtagatatccagaagaatggtgttaaatttaccaacagcaaattgacttctttcaat
gaagaatataccaaaaataaaaccgagtatgaagaagcccaggatgccattgttaaagaa
attgtcaatatatcttcagggtatgtagaaccaatgcaaacactcaatgatgtgttagca
cagctagatgctgttgtcagctttgctcatgcgtcaaatggagcacctgttccgtatgta
cgaccagtcattttggagaaaggacaaggaagaattatattgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgatgtatactttgaaaaagat
aagcagatgttccacatcattactggccccaatatgggaggcaaatcaacatatattcgc
caaactggggtgatagtactcatggcccaaattgggtgttttgtgccctgtgagtcagca
gaagtgtcaattgtggactgtatcttggcccgggtaggggctggtgacagtcaattgaaa
ggagtctctacattcatggctgaaatgttggaaactgcttctatccttagggtgattggt
gtctgtgatcaaagttttgggattcatgttgcagagcttgctaatttccctagacacgta
atagagtgtgctaaacaaaaagccctggaacttgaggagtttcagaatattggagaatca
caaggatatgatgaaatggaaccagcagcaaagaagtgctatctggaaagagagcaatca
gtgcctcctgttctctctgaggagcagtgggaagcttttgcctttcatgtgacacagcag
ttttccctcctccctgaagaactgtgtttcgtggtgtcagacagcatgaagaacatgagc
aaattcaacgtatgtcagcatatgtttgctttggtgtgtagtttgtccaaaccaaagtgc
ccacacgcatctctcatccggccacggaggcgattcagcagtggcgagaaccatatggag
gtgacggatgttggagctttgaatggactgccccggtcttatttctggatttggtga
DBGET
integrated database retrieval system
