Propithecus coquereli (Coquerel's sifaka): 105807101
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Entry
105807101 CDS
T08746
Symbol
PABPC4L
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03015
mRNA surveillance pathway
pcoq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105807101 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
105807101 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoq03019
]
105807101 (PABPC4L)
03041 Spliceosome [BR:
pcoq03041
]
105807101 (PABPC4L)
Messenger RNA biogenesis [BR:
pcoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105807101 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
105807101 (PABPC4L)
Spliceosome [BR:
pcoq03041
]
Complex C
Other components
Complex C specific factors
105807101 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DEAH11
RRM_7
RRM_occluded
RRM_10
RRM_MARF1
RRM_3
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
105807101
NCBI-ProteinID:
XP_012495846
Ensembl:
ENSPCOG00000025578
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MRLLPKLEEQYLNSTAWPLSGDPEATTSEPDLSCGRVSSCSDCSKTREXAHVGEEKEMSV
AAKYRMASLYVGDLHGDVTEDLLFKKFSTVGPVLSIRICRDVVTRRSLGYAYVNFLQLTD
AQKALDTMNFDMVKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEYFSAFGK
ILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKDCKVFVGRFKNRKDREAELR
NKASEFTNVYIKNFGEDMDDERLKGVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAA
KKAVEEMNGKDINGQLIFVGRAQKKVERQAELKQMFAQLKKERLRGCQGVKLYIKNLDDT
IDDEKLRKEFSSFGSISRVKVMQEEGQSKGFGLICFSSPEEATKAMTEMNGRILGSKPLS
IALAQRH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgttgcctaagctggaggagcagtacttgaactccaccgcttggcctctaagt
ggtgatcctgaggccaccacatctgagccagacctgagctgtggccgagtgtcctcttgc
agcgattgctccaagacccgggaataggcccacgttggtgaggagaaggagatgagtgta
gcagccaagtaccgcatggcctccctttatgtgggtgacctacatggagatgtcaccgag
gaccttctgttcaagaagttcagcactgtggggcctgtcttgtccatccgcatctgcagg
gacgtggtcacgcgccgctctctgggctatgcctacgtgaacttcttgcagctgactgat
gctcagaaggccctggacacaatgaactttgacatggtaaaaggcaaatctatccgtctc
atgtggtctcaacgtgatgcctacttaaggagatctggaattgggaacgtgttcatcaag
aatctggacaaatccatagataacaaaaccctttatgaatatttttcagcttttggaaag
atcctgtcttccaaggtgatgagtgatgatcaaggctccaagggctatgcatttgtgcac
tttcagaaccagagtgctgcagacagggccattgaggaaatgaatggaaagctgctcaag
gactgcaaggtgtttgttggcagattcaaaaaccgaaaagatcgggaagcggaactcaga
aataaagccagtgaattcaccaatgtttacatcaaaaactttggagaagacatggatgat
gagagattaaagggagttttcagtaaatatggcaaaaccctgagtgttaaggtgatgaca
gattccagtgggaaatccaagggctttggctttgtgagttttgatagccatgaggctgcc
aaaaaggcagttgaagaaatgaatggcaaggatataaatgggcagctgatttttgtaggc
cgggcacaaaagaaagtagagcgacaggctgagttaaagcaaatgtttgcgcagctgaaa
aaggaaagacttcgtgggtgccagggggtaaagctgtatattaagaaccttgatgacacc
attgatgatgaaaaactacgaaaggaattttcttcatttggatcaattagcagggttaag
gtaatgcaagaagaaggtcaaagcaaaggatttggcttgatctgcttctcctctcctgag
gaggctactaaagcaatgactgagatgaatggccgcatcttgggctccaaacccctcagc
attgccctggcccagaggcactag
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