Propithecus coquereli (Coquerel's sifaka): 105808243
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Entry
105808243 CDS
T08746
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105808243 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoq03021
]
105808243 (PCF11)
03019 Messenger RNA biogenesis [BR:
pcoq03019
]
105808243 (PCF11)
Transcription machinery [BR:
pcoq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105808243 (PCF11)
Messenger RNA biogenesis [BR:
pcoq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
105808243 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
SHOCT
Motif
Other DBs
NCBI-GeneID:
105808243
NCBI-ProteinID:
XP_012497279
Ensembl:
ENSPCOG00000000051
LinkDB
All DBs
Position
Unknown
AA seq
1687 aa
AA seq
DB search
MSEQTPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPASAPSKLHVSQIPPMAVKAPHQVPVQPEKTRPGPSLQIQDLKGTNRDPRLN
RISQHSHGKDQSHRKEFLMNTLNQSDIKTSKTVPSEKLNSSKQDKSKSGEKITKKELDQL
DSKSKSKSKSPSPLKNKLSHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKTDGKDDDVK
EKRKTTEKKDKDEHMKSSEHRLVGSRNKIINGIVQKQDTIIEESEKQGTKPGRSSTRKRS
RSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPKAGKTRQSGIKQSHMEEFTPPSRE
DRNAKRSNKQDVRDPRRMKKSEEDRPQETANQHSTKSGTEPKENIENWQSSKSTKRWKSG
WEENKSLQQGDEHSKSPHLRHRESWSSTKGILSPRPPKQQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQEEFLVVVHQIRQIFQYQEGKHRCNVRDSPTEENKGGLKKKP
LLSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASR
NSGAQFDRKEQFSERARRLSPISGSRTYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDSDKPFVDSPGARFSSLDTNQRLTALAEDRPLFDGPARPSVTRDGPTKMI
FEGPNKLSPRIDGPPTPGSLRFDGSPGQMGGGGPLRFDGPQGQLGGGCPLRFEGPPGPVG
TPLRFEGPIGQAGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGL
RFEGPHGQPVGGLRFDSPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQ
QGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFE
GPPVPGSGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQ
PGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVAF
NQTSPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGSQSFSNPLNRASGHY
FDEKNLQSSQFGNFGNLPAPITVGNIQASQPVLTGVGQPVAFGQGQQFLPVHPQNPGAFV
QNPSGAIPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATTQVNEVAAQPPPEEEED
QNEDQDVPDLTNFTIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQ
NRTEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKE
FQSVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSF
DCTPSPSKTPVENPLNIMLNIVKNELQEPCESPKVKEERIDTPPACTEESIATPTEIKTE
NDTVESV
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtgctgcgggggcccgggaggacgcctgtcgg
gattatcagtcatcgctcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaaacttcctgttatgtaccttatggattctatc
gtgaaaaacgttggaagagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaagttacgttcc
acatgggatgaaatattccctttgaagaaactttatgccctggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctgccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcctgaggagccttcaacacctggcacagtggtc
agctcccctagcatctccactcctccaattgttcctgatatacaaaagaatcttacccaa
gaacaactaatacggcaacaattactggcaaaacaaaaacagttgttagaacttcagcag
aaaaagcttgagcttgagctagagcaagctaaggcacaactggcagtttctcttagtgtt
cagcaggaaacatccaacttaggtcctgcatctgcaccttccaaattacatgtttcacaa
attccccctatggcagttaaagctccccatcaggttcctgtgcaacctgagaaaacccgt
ccaggtccatccttacaaattcaggatttgaaagggactaaccgggatccccgtcttaat
aggataagccagcattctcatggaaaagatcaaagtcacaggaaagaattcctaatgaac
acattgaaccaatctgatattaagacaagtaaaactgtaccctctgaaaaactaaattca
tccaagcaagacaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaccaatta
gattctaaatctaaatctaaatctaaatcaccatcacctttgaaaaacaaattatctcac
acaaaagacttgaaaaatcaagaatctgaaagtatgaggttgtctgatatgaataagaga
gatccaagattaaaaaaacatcttcaagataagactgatggcaaagatgatgatgtaaaa
gagaagagaaaaactacagaaaaaaaagataaagatgagcacatgaaatcatctgaacac
agactggttggaagtagaaataaaataataaatggcattgtacaaaaacaggatacaata
atagaagaatcagaaaaacaggggacaaaaccagggagatcgagtactagaaagcgatca
agatctcgatcacccaagtctcggtcaccaattatccattccccaaagagaagagatagg
cggtcacccaaaagaaggcaaaggagtatgtctccaacttcgacacccaaagcaggaaag
actcgccaatcaggaattaagcagtcacatatggaagagtttacaccaccttccagggaa
gacagaaatgctaagcgaagtaataaacaggatgttcgagatccaaggcgaatgaaaaag
tctgaagaggatcgaccacaagaaactgcaaatcagcattctacaaagtcaggcactgaa
ccaaaggagaatatagaaaattggcaaagttccaagtctaccaaaagatggaaatctggt
tgggaagaaaataaaagtttacaacagggtgatgaacatagtaaatctcctcatctaagg
catagggagagctggtcaagcactaaaggaattctgtcacctcgaccccccaagcagcag
cagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggaa
gaattccttgttgttgtgcatcaaattcgacagatatttcagtatcaagaaggtaaacat
agatgcaatgtacgggatagtcctacagaagaaaataaaggtggattaaaaaagaaacct
ctcttatctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacag
gttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttg
actgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtagg
aatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttct
cctatatctgggagtcgtacttatgctgagaatctttcaccccatgagggccggagaaga
catgacgagcaagtctctgctaaaggtgtacgagaagagcagagatctccattcaatgat
cgttttccacttaagcgacctcgatatgaagattcagataaaccttttgtagatagccca
ggagcaagattttccagtcttgatacaaatcagcgacttacggctttggctgaagacaga
ccattatttgatggacccgctaggccatcggtaacgagagatggcccaaccaagatgatt
tttgaaggacctaataaattaagccctagaattgatggacctcccacaccaggttctctt
cggtttgatgggtcaccaggacaaatggggggaggaggccctttgagatttgacggacca
caaggtcagctaggaggtgggtgtcctttgagatttgaaggtcctccaggaccagtaggg
acgcctctgcggtttgaggggccaattggtcaagctggaggaggtggttttcggtttgaa
ggttcccctggtcttaggtttgagggatctgcaggtggtttgagatttgagggaccaggg
ggccagcctgtgggtggtctcagatttgagggacatcgtggtcaacctgtaggtggtcta
agatttgaaggacctcatggtcagcctgtgggtggacttagatttgatagtccccgaggt
cagcctgtaggtggacttagatttgagggaggtcatggtccatcaggagctgcaattagg
tttgatggacctcatggtcagccaggaggagggatcagatttgagggccctttgttacag
caaggagttggaatgaggtttgagggcccccatggccagtcagtagctggtctgagattt
gaaggacaacataatcaacttggtgggaaccttaggtttgagggtccacatggtcaacca
ggggttgggatcaggtttgaaggacctttagtccaacaaggaggtggaatgaggtttgag
ggtcctcctgtaccaggaagtggcctgagaattgaagggcctctgggtcagggtggtcca
agatttgaaggttgtcatgctttaaggtttgatgggcagccaggtcagccatcactcttg
ccaagatttgatggattacatggtcagccaggtcctagatttgaaagaactcctggtcag
ccaggcccacagaggtttgatggaccacctggacagcaggttcaaccaagatttgatggt
gtacctcaaagatttgatggtccacaacaccagcaagcatcaaggtttgatattcctctt
ggtcttcaaggcacaagatttgacaatcatccttcacaaaggcttgaatcagtggctttc
aatcagactagtccatataatgatcctcctggcaatgcttttaatgccccgtcccaagga
ctacagttccaaagacatgaacaaatatttgattcacctcaaggaccaaattttaatgga
ccacatggtcctggaagccagagtttttcaaatccccttaaccgagcttctggacactat
tttgatgaaaaaaatcttcagagttctcaatttggaaactttggcaatttacctgctcca
ataacagtaggaaatattcaagcgtctcaaccggttctgactggtgttggtcagccagtg
gcttttggccaaggacaacaatttttaccagttcatccacaaaatcctggagcatttgtt
cagaatccttcaggagccattcctaaggcatatcctgataatcatctcagtcaggtggat
gtaaatgagttgttttcaaaactgttaaaaacaggaattctcaaattgtcccagcctgat
tcagcaacaacacaagtaaatgaagttgctgctcagcctccccctgaagaggaggaagat
caaaatgaagatcaagatgttccagatcttactaattttacgattgaagaattgaaacaa
cgttatgatagtgttataaatcgactgtacactggtattcagtgttactcttgtggaatg
aggtttacaacatcacagacagatgtatatgcagatcacttggactggcattatcggcaa
aatagaacagaaaaagatgttagcagaaaagtcactcatagacggtggtactacagttta
acagactggatagaatttgaggagatagctgatctggaagaacgtgcaaagagccagttt
tttgaaaaggtgcatgaagaagttgtgctcaaaactcaggaggctgctaaggaaaaggag
ttccaaagtgtacctgctggaccagctggagcagttgagagttgtgaaatctgtcaagaa
caatttgaacaatactgggatgaagaagaggaggaatggcatttaaaaaatgctattaga
gtagatggaaagatttatcatccatcatgttatgaagattatcaaaatacatcttcattt
gattgtacaccatctcccagcaagacaccagttgaaaaccccttgaacattatgttgaac
attgtcaaaaacgaattgcaggaaccttgtgaaagtcccaaagttaaggaagaacggatt
gatactccaccagcttgtacagaggaaagcatagcaacacccactgaaattaaaacagaa
aatgatacagttgagtcagtctaa
DBGET
integrated database retrieval system
