Propithecus coquereli (Coquerel's sifaka): 105808324
Help
Entry
105808324 CDS
T08746
Symbol
SNRNP200
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105808324 (SNRNP200)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoq03041
]
105808324 (SNRNP200)
Enzymes [BR:
pcoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105808324 (SNRNP200)
Spliceosome [BR:
pcoq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105808324 (SNRNP200)
Complex C
U5 SnRNP specific factors
105808324 (SNRNP200)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
AAA_30
PhoH
SWI2_SNF2
DUF603
Motif
Other DBs
NCBI-GeneID:
105808324
NCBI-ProteinID:
XP_012497393
Ensembl:
ENSPCOG00000024608
UniProt:
A0A2K6GEZ9
LinkDB
All DBs
Position
Unknown
AA seq
2136 aa
AA seq
DB search
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK
PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI
QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT
DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL
SANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDR
ECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSVAEKERIMGKMEADPELSKFL
YQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVFTQGS
HFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKT
LNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIY
IAPMRSLVQEMVGSFGKRLATYGITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKG
GERTYTQLVRLIILDEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYED
VATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQ
VLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPY
GFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR
WTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDM
LNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTA
ALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSL
SSEFKNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMAD
MVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLPEEVV
KKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKV
ELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLITFFVPVFE
PLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESL
YQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQNSEGRCVYIT
PMEALAEQVYMDWYEKFQDRLNKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWK
QRKNVQNINLFVVDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDV
AHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVI
VFVPSRKQTRLTAIDILTTCAADIQRQRFLHCTEKDLIPYLEKLSDSTLKETLLNGVGYL
HEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYP
IYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEI
VTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSK
CISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPI
RHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAI
RLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKGVE
SVFDIMEMEDEERNALLQLTDSQIADVARFCNRYPNIELSYEVVDKDSIRSGGPVVVLVQ
LEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATG
AHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgaccgcccgtagcctgcagtacgagtacaaggcgaactcaaatcttgtg
ctccaagctgaccgatctctcatcgaccgcacccgccgggatgaacccacaggagaggta
ttgtccctggttgggaagctggagggcacccgtatgggagataaggcccaacggaccaaa
ccacagatgcaggaggaaagacgagccaagcgaagaaagcgtgatgaagaccggcatgac
atcaacaagatgaagggttatactctgttgtctgagggcattgacgagatggtgggcatc
atctacaagcccaaaactaaggagacccgggagacctatgaggtgctgctcagcttcatc
caggctgcccttggggatcagccacgcgatatcctttgtggggcagctgatgaagttctg
gctgtcctaaagaatgaaaagctgcgggacaaggaaaggcgaaaggagattgacctgctg
ctgggtcaaacagatgataccagataccatgtgctagtgaacttgggcaagaagatcaca
gactatggtggagacaaggaaatccaaaatatggatgacaacattgatgagacgtatggt
gtgaatgtgcagtttgagtctgatgaggaggaaggtgatgaagatgtgtatggggaagtt
cgggaagaggcatctgatgatgacatggaaggggacgaggctgtcgtgcgctgcaccctc
tcggctaatcttgtagcctcaggtgaactgatgagttccaagaagaaggatttgcaccct
cgggatattgatgcattttggctacaacggcagctcagccgtttctatgatgatgccatc
gtgtcacagaagaaggcagatgaagtgttagagattttgaagacggccagtgatgatcgg
gaatgtgagaaccagctggttctgctccttggtttcaacactttcgattttattaaagtg
ttgcggcagcataggatgatgattttatactgtaccttgctggccagtgcacagagtgta
gctgaaaaggaaaggatcatgggaaagatggaagccgatccagagctatccaagtttctc
taccagctccacgagacagagaaagaggatctgatccgagaggaaaggtcccggagagag
cgagtgcgtcagtcccgaatggacaccgatctggaaaccatggatttggaccagggtgga
gaggcactggctccacggcaggttctggacttagaggatcttgtttttacccaagggagc
cactttatggccaataaacgctgtcagcttcctgatgggtccttccgtcgccagcgtaag
ggctatgaagaggtgcatgttcctgctctgaagcccaagccctttggctcagaagaacaa
ctgcttccggtggaaaagctgccaaagtatgcccaggctggattcgagggcttcaaaaca
ctgaatcggatccagagtaaactctaccgtgctgccttggagacggatgagaatctgctg
ctatgtgctcctactggtgccgggaagaccaacgtggctctgatgtgtatgcttcgcgag
atagggaaacacataaacatggacggcacaatcaatgtggatgacttcaaaattatctat
attgctcccatgcggtccttggtgcaggagatggtgggcagttttggaaagcgcctggcc
acctatggcatcactgtcgctgaactgactggagaccaccagctgtgcaaggaagagatc
agcgccactcagatcattgtctgcacccctgagaagtgggatatcattacccgcaagggt
ggcgagcgcacctacactcagctagtgcggctcatcattctggatgaaatccatcttctc
catgatgacagaggacctgtcttagaagctttggtggccagggccatccgaaacattgag
atgacccaagaggatgtccgactcattggtctcagtgccaccctccccaactatgaagat
gtggctacctttctgcgtgttgaccctgccaagggcctcttctactttgataacagcttc
cgcccagtgcctctggaacagacttatgtgggcatcacagagaaaaaagctatcaagcgt
ttccagatcatgaatgaaatagtctatgagaaaatcatggaacatgctggaaaaaatcag
gtgcttgtgtttgtccactcccggaaggagactgggaagacagccagagccatccgggac
atgtgcctagagaaggacactctgggtctgtttctgagagagggctctgcctccacggaa
gtcctgcggacggaagctgagcagtgcaagaacctggagctgaaagatcttctgccgtac
ggctttgctattcatcatgcagggatgaccagagttgaccgaacacttgtggaggatctt
tttgctgataaacatattcaggttttagtttccacggcaactctggcttggggtgtaaat
cttcctgcacatactgtcatcatcaaaggcacccaggtgtacagtccagagaaggggcgc
tggacagaactgggagccctggacattctgcagatgctgggacgtgctggacgaccccag
tatgacaccaagggtgaaggcatactcatcacatctcatggggagctacagtactacctg
tccctcctcaatcagcaacttcctattgagagccagatggtatcaaagcttcccgacatg
ctcaatgcagaaatcgtgctggggaatgtccagaatgcaaaggatgcagtgaactggctg
ggctacgcctacctgtacatccgaatgctccgatccccaaccctctatggcatctctcac
gatgacctcaagggagatcccctgctggaccagcgccgactagatctggttcatactgct
gccttgatgctggataagaacaatctggtcaagtatgataagaagactggcaacttccag
gtgacagaactgggccggatagccagccactactacatcaccaatgatacggtgcagacc
tacaaccagctgctgaagcccaccctgagtgagattgagcttttcagagtcttctctttg
tcctccgagtttaagaacatcactgtgagagaggaggagaagcttgagctgcagaaattg
ctggagagagtgcccatcccagtaaaggagagcatcgaggaacccagtgcaaagatcaat
gtgcttctccaagccttcatctcgcagctgaaactggagggctttgcactgatggctgac
atggtgtatgttacacagtcggctggccggctcatgcgtgcgatctttgaaattgtcctg
aaccgaggttgggcacagcttacagacaagaccctgaacctctgcaagatgatcgacaaa
cgcatgtggcagtccatgtgtcctctgcgccagttccgcaaactccctgaggaagtagtg
aagaagattgaaaagaaaaactttccctttgagcgtctgtatgacctgaatcacaatgag
ataggggagcttatccgcatgccaaagatggggaagaccatccacaaatatgtccacctg
tttcccaagttggagttgtcggtgcacctgcagcctatcacgcgctccaccctgaaagtg
gagctgaccatcacgccggattttcagtgggatgaaaaggtccatggctcgtccgaggca
ttctggattctggtggaggacgtggacagcgaggtgattctgcaccatgagtattttctc
ctcaaggccaagtacgctcaggacgagcacctcattacgttcttcgttcctgtctttgaa
ccgctgccccctcagtacttcatccgagtggtgtctgaccgctggctctcttgtgagacc
cagctgcctgtctccttccggcacctgatcctaccagagaagtacccacctccaactgaa
cttctggacctgcagcccttacccgtgtctgctctgagaaacagtgcctttgagagcctt
taccaagataaatttcctttcttcaatcctatccagacccaagtatttaacaccgtgtac
aacagtgacgacaatgtgtttgtgggggctcccacgggcagcgggaagactatctgtgca
gaatttgccatcctgcggatgctgctgcagaactcggaggggcgctgtgtctacattacc
cccatggaggcccttgcagagcaggtatacatggactggtatgagaagttccaggacagg
ctcaacaagaaggtggtgctcctgacaggggagaccagcacagacctgaagctgctaggc
aaaggcaacatcatcatcagcacccctgagaaatgggacatactttcccggcggtggaag
cagcgcaagaatgtccagaacatcaacctctttgtggtggatgaggtccaccttattggg
ggcgagaatgggcctgtgttagaagtgatatgctcccggatgcgctacatctcctcccag
attgagcgtcccatccgcattgtggcacttagctcttcgctctcaaatgctaaggacgtg
gcccactggctgggttgcagtgccacctccactttcaacttccaccctaatgtgcgcccc
gttcccttggagctgcacatccagggctttaacattagccatacacaaactcgcctgctc
tccatggctaagcctgtataccatgctatcaccaagcactcgcccaagaagcctgtcatt
gtctttgtcccgtctcgcaagcagacccgcctcactgccattgacatcctcaccacgtgt
gcagctgacatccagcggcagaggttcttacactgcaccgagaaggatctaatcccgtac
ctggagaagctaagtgacagcacgctcaaggaaacactgttaaatggggtgggctacctg
catgaagggctcagccccatggagcgacgcctggtggaacagctcttcagctcaggtgct
atccaggtagtggtggcttctcggagtctctgctggggcatgaacgtggccgctcacctt
gtgatcatcatggacacccagtactacaatggcaagatccatgcctatgtggattacccc
atctacgacgtgcttcagatggtgggccacgccaaccgccccctccaggatgatgagggc
cgctgtgttatcatgtgtcagggctccaaaaaggatttcttcaaaaagttcttatatgag
ccattgccagtagagtctcacctggaccactgtatgcatgaccacttcaatgctgagatt
gtcaccaagaccattgagaacaagcaggatgctgtggactacctcacctggacctttctg
taccgccgtatgacacagaaccccaattattacaacctgcagggcatttcccatcgtcac
ttgtccgaccacttgtcagagctggtggagcagaccctgagtgacctggagcagtctaag
tgtatcagcattgaggatgagatggatgtggcgcctctaaacctgggcatgatcgctgcc
tactattacatcaactacaccaccattgagctcttcagcatgtccctgaatgctaagacc
aaggtgcgagggcttatcgagatcatctccaatgcggcagagtatgagaatattcccatc
cggcaccatgaagacaacctcctgcggcagttggctcagaaggtcccccacaagctgaat
aaccctaagttcaatgatccgcacgtcaagaccaacctgcttctgcaggcgcatctgtcc
cgcatgcagctgagtgctgaactgcagtcggatacagaggaaatccttagtaaggcaatc
cggctcatccaggcctgtgtggacgtcctctccagcaatgggtggctcagccctgctctg
gcagccatggaactagcccagatggtcacccaagctatgtggtccaaggattcatacctc
aaacagctgccacacttcacctcagagcatattaaacgttgcacagacaagggggtggag
agtgttttcgacatcatggagatggaggatgaggaacggaatgcattgcttcagctgact
gacagccagatcgcagatgtggcccgcttctgtaaccgctaccctaatattgaactgtcg
tacgaagtggtggataaggacagcatccgcagtggtggcccagtggtggtgctggtgcag
ctggagcgagaggaggaagtcacaggccctgttattgcacctctcttcccacagaaacgt
gaagagggctggtgggtggtgattggagatgcaaagtccaatagcctcatctccatcaag
aggctcaccctgcagcagaaggccaaggtgaaactggactttgtggccccagccactggt
gcccacaactacactctgtacttcatgagtgacgcttacatgggatgtgaccaggagtac
aaattcagtgtggatgtgaaagaagctgagacagacagtgactcagattga
DBGET
integrated database retrieval system
