Propithecus coquereli (Coquerel's sifaka): 105808412
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Entry
105808412 CDS
T08746
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03015
mRNA surveillance pathway
pcoq03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105808412 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105808412 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoq03019
]
105808412 (CPSF6)
Messenger RNA biogenesis [BR:
pcoq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
105808412 (CPSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
105808412
NCBI-ProteinID:
XP_012497515
Ensembl:
ENSPCOG00000024384
UniProt:
A0A2K6GDR2
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
SGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPGNLIKHLVK
GTRPLFLETRIPWHMGHSIEEIPIFGLKAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPL
AGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPF
PPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDP
YGRPPPYDRGDYGPPGREMDTTRTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGS
AIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRS
REKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggagtggaccacatagacatttacgcggatgtgggcgaagagttcaaccag
gaagctgaatatggtgggcatgatcagatagatttgtatgatgatgtcatatctccatct
gcaaataatggagatgctccagaagaccgggattacatggatactctcccaccaactgtt
ggtgatgatgtgggtaaaggagcggcaccaaatgttgtctatacatatactggaaagaga
attgcattatatattggaaatctaacatggtggacaacagatgaagatttaactgaagca
gttcattctttgggagtaaatgatattttggagataaaattttttgaaaatcgagcaaat
ggccagtcaaaagggtttgcccttgttggtgttggatctgaagcatcttcaaaaaaatta
atggatctgttgcctaaaagagaacttcatggtcagaatcctgttgtaactccatgcaat
aaacagttcctgagtcaatttgaaatgcagtccaggaaaactacacaatcaggacaaatg
tctggggaaggtaaagctggccctccaggaggcagttcacgtgcagcatttccacaaggt
ggtagaggacggggccgttttccaggggctgttcctggtggggacagatttcctgggcca
gcaggaccaggagggccacccccaccttttccaggaaatttgatcaagcatcttgttaaa
ggaactcggcctttgttcctggaaactaggattccatggcatatggggcacagcatagag
gaaatacccatttttggcctaaaagctggacagactccaccacgtccacccttaggtcct
ccaggtccacctggtccaccaggtcctccacctcctggtcaggttctgcctcctcctcta
gctgggcctcctaatcgaggagatcgccctccaccaccagttctttttcctggacaacct
tttgggcaacctccgttgggtccgcttcctcctggccctccgcctccagttccaggctac
ggcccccctcctggtccaccacctccacaacagggaccacctccacctccaggccctttt
ccacctcgcccacctggtccacttgggccaccccttacacttgctcctcctccgcatctt
cctggaccacctccaggtgccccaccgccagctccacatgtgaacccggctttctttcct
ccaccaactaacagcggcatgccaacatcagatagccgaggtccaccaccaacagatcca
tatggccgacctccaccatatgataggggtgactatgggccccctggaagggaaatggat
actacaagaacaccattgagtgaagctgagtttgaggaaatcatgaatagaaatagggca
atctcaagcagtgctatttcaagagctgtgtctgatgctagtgctggtgattatgggagt
gctattgagacattggtaactgcaatttctttaattaaacaatccaaagtatctgctgat
gatcgttgcaaagttcttattagctctttgcaagattgccttcatggaattgagtccaag
tcatatggttctggatcaagaagacgtgaacgatcaagagagagggaccatagtagatca
cgagaaaagagtcggcgtcataaatcccgtagtagagatcgtcatgatgattattataga
gagagaagtagagaacgagagaggcaccgggatcgtgaccgagaccgcgaccgagagcgt
gacagagagcgagagtatcgtcatcgttag
DBGET
integrated database retrieval system
