Propithecus coquereli (Coquerel's sifaka): 105808536
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Entry
105808536 CDS
T08746
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03013
Nucleocytoplasmic transport
pcoq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105808536 (UPF2)
03015 mRNA surveillance pathway
105808536 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoq03019
]
105808536 (UPF2)
Messenger RNA biogenesis [BR:
pcoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105808536 (UPF2)
mRNA cycle factors
P-body specific factors
105808536 (UPF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
105808536
NCBI-ProteinID:
XP_012497653
Ensembl:
ENSPCOG00000021656
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MPAERKKPANMEEKDSLLNNKEKDCGERRPVSSKEKPKDDLKLTAKKEVSKAPEDKKKRL
DDDKRKKEEKERKKKEEEKVKAEEESKKKEEEEKKKHEEEERKKQEEQAKRQQEEEAAQM
KEKEESVQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVSSIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLVDLKAFVPAI
LFKDNEKSCQNKESNKDDSKEVKEPKDNKEVSSPDDLEIELENLEINDDTLELEGGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK
DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSKD
SMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHIPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaaatatggaagaaaaagactctttactaaacaac
aaggaaaaagactgcggtgaaaggcggccagtgagcagcaaggagaagccaaaagacgat
ctcaaactcactgccaagaaggaggtcagcaaggcccctgaagacaagaagaagagactg
gacgacgataagagaaaaaaggaagagaaggagcgcaagaaaaaagaagaagaaaaggtg
aaagcagaggaagaatcaaagaaaaaagaggaagaagaaaaaaagaaacatgaagaggaa
gagagaaagaagcaagaggagcaggcgaaacgtcagcaagaagaagaagctgctcagatg
aaagagaaagaagaatccgttcagcttcatcaggaagcttgggaacgacatcagttaaga
aaggaacttcgtagcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttcttt
agccgcctggactcaagtttgaagaaaaatactgcttttgtcaagaaattaaaaaccatt
acggaacagcagagagattccttgtcccatgattttaatggcctgaatttaagcaaatac
attgcagaagctgtatcttctatcgtggaagcgaagctgaaaatctctgacgtgaactgt
gctgtgcacctgtgctctctctttcaccagcgctatgctgactttgccccatcacttctt
caggtctggaaaaaacattttgaagcaaggaaagaggagaaaacgcctaacattaccaag
ttaagaactgatttgcgtttcatcgcagaattgacaatagttgggattttcactgacaag
gaaggtctttccttaatctatgaacagctaaaaaatattattaacgctgatcgggaatcc
cacactcacgtttctgtggtgatcagtttctgtcgacattgtggagatgatattgctgga
ctggtaccaaggaaagtaaagagtgctgccgagaaatttaatttgagttttcctcctagt
gagataattagtccagagaaacaacagcctttccaaaatcttttaaaagagtactttacg
tctttgaccaaacacctgaaaagggaccacagggagctccagaatactgagagacaaaac
aggcgtattctacattctaaaggggagctaagtgaagatagacataaacaatatgaggaa
tttgctatgtcttatcagaagctgctggcaaattctcaatccttagcagaccttttggat
gaaaatatgccagatcttcctcaagataaaccaacaccagaagagcatgggcctggaatt
gatatatttacacctggtaaacctggagaatatgatttggaaggtggtatatgggaagat
gaagacgctcggaatttttacgagaacctcgttgatttgaaggcttttgttccagccatc
ttgtttaaagacaatgaaaaaagttgtcagaataaagagtccaacaaagatgattccaaa
gaggtaaaagaacctaaggataataaggaggtatcaagtcctgatgatttggaaattgag
ttggagaatctagaaatcaatgacgacaccttggagctagagggtggagatgaagctgaa
gatcttacgaagaaacttcttgatgagcaagaacaagaggatgaagaagccagcactgga
tctcatctcaagctgatagtggatgctttcctccagcagttgcccaactgtgtcaaccga
gatctgatagacaaggcagcaatggatttttgcatgaacatgaacacaaaggcaaacagg
aagaagttggtccgggcactcttcatagttcctcgacaaaggttggatttgctaccattt
tatgcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgt
tccatgctgaggggggatttcagatttcatgtacgaaaaaaggaccagatcaatattgaa
acaaagaacaaaactgttcgttttattggagaactaactaagtttaagatgttcacaaaa
aatgatacgctgcattgtctaaagatgcttctgtcagacttttctcatcatcatattgaa
atggcatgtaccctactggagacatgtggacggtttcttttcagatctccagagtctcac
ctgaggaccagtgtgcttctggagcaaatgatgagaaaaaagcaagcaatgcatcttgat
gcaagatatgttacgatggtagagaatgcatattactactgcaacccacctccagctgaa
aaaactgtgaagaagaaacgacctcctctccaggaatacgtccggaaacttctgtacaag
gatctctctaaggttaccaccgagaaggttttgagacagatgcgaaagttgccctggcag
gaccaagaagtgaaagactatgtcatttgttgtatgataaacatatggaatgtgaaatat
aatagtattcattgtgtagccaacctcttagcaggactagtgctctaccaagaggatgtt
gggattcatgttgtggatggagttttggaagatattcgattaggaatggaggttaatcaa
cctaaatttaatcagaggcgtatcagcagtgccaagttcttaggagaactttataattac
cgaatggtggaatcggctgttattttcagaactctttattcttttacttcatttggtgtt
aaccctgatggttctccaagttcactggaccctccggagcatcttttcagaattagacta
gtatgcactattttggatacctgcggccagtactttgacagaggttccagtaaacgaaaa
cttgactgcttcctcgtatattttcagcgttatgtttggtggaagaaaagtttggaggtt
tggacaaaagaccatccatttcctattgatatagattacatgatcagtgatacactagaa
ctgctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggtgcaa
gacttggaacgagagttcttaataaaactaggcctagtaaatgacaaagattcaaaagat
tctatgacagaaggagaaaatcttgaagaggatgaagaagaagaagaagggggagctgag
acagaagaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggttcc
gataatgatgatgatgagggagaggaagaagaggaggagaatacagattatcttacagat
tccaacaaggagaatgaaactgatgaagagaataccgaggtaatgattaaaggtggcgga
cttaagcacataccttgtgtagaagatgaggacttcattcaagctctggataaaatgatg
ctagaaaatcttcagcaacgaagtggcgaatctgttaaagtgcaccaacttgatgttgct
attcctttgcatctcaaaagccagctgaggaaaggtcccccacttggtggtggggaagga
gaggcagagtctgcagacacgatgccatttgtcatgttaacaagaaaaggcaataaacag
cagtttaagatccttaatgtacccatgtcttcccaacttgctgcaaatcactggaaccaa
cagcaggcagaacaagaagagaggatgagaatgaaaaagctcacactagatatcaatgaa
cggcaagaacaagaagattatcaagaaatgctgcagtctcttgcacaacgcccagctcca
gccaataccaatcgtgagcggcggcctcgttaccaacatccaaagggagcacctaatgca
gatctaatctttaagactggtgggaggagacgttga
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integrated database retrieval system
