Propithecus coquereli (Coquerel's sifaka): 105809887
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Entry
105809887 CDS
T08746
Symbol
BLM
Name
(RefSeq) Bloom syndrome protein isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03440
Homologous recombination
pcoq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105809887 (BLM)
03460 Fanconi anemia pathway
105809887 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcoq03032
]
105809887 (BLM)
03400 DNA repair and recombination proteins [BR:
pcoq03400
]
105809887 (BLM)
Enzymes [BR:
pcoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105809887 (BLM)
DNA replication proteins [BR:
pcoq03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
105809887 (BLM)
DNA repair and recombination proteins [BR:
pcoq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
105809887 (BLM)
Bloom's syndrome complex (BTR)
105809887 (BLM)
FA (Fanconi anemia) pathway
105809887 (BLM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM_N
BDHCT_assoc
DEAD
BDHCT
Helicase_C
RecQ_Zn_bind
RQC
HRDC
DUF4504
Motif
Other DBs
NCBI-GeneID:
105809887
NCBI-ProteinID:
XP_012499232
Ensembl:
ENSPCOG00000000439
LinkDB
All DBs
Position
Unknown
AA seq
1418 aa
AA seq
DB search
MAAVPQNNLQEQLQRHSARKLNNKLSLSKPKSSGFTFKKKTSSDNNVSVTSVSVAKTPVL
SNKGVNVTEAFSFSVPLSHTTSQQTRIDDFKNAPAGQQTQRVGSKPLLPDLLQIPKKVLC
TTQNTPTVKKPRDAAFKKLEFSSSPDSFSTINDWDDMDDFDTSGTSEAFVTPLKNHFVRV
STAQKSKKAKGNFLKEQLYKTNTVKADLTPSSSESKQVDLTKGQKDDSEWLSSDVICIDD
DPISEVPINEDTQESHSSKTHLGDERDNSEKKKNLEEAELHSTEKVPCIEFEHDDYDIDF
VPPSPEEEIISAASSSLKCFSMLKDPDTSDKEKDVLSTTKDILLKPEKITAQEPNLETST
DCDARQLNLQQQLIRVMDHICKLIDAIPAEKLKALDCGNELLEQRNIRRKLLAEADFNRS
DASLLGSVWRCRPDSLGSPVEGDSSPGENFMKELNFPHLPSNSVFPGECLLTTTPGKTGF
SATTKNHFERPLFNSHLQKSFVSSNWAETPKLEKRNESSYFPGNILTSTAVKDQNKHTAS
LNDLEMQASYDIDNFGIDDFDDDDDDDWENIMDNLAASKSSTAAYQSIKEGRPIKSVSEG
ISSAKTNCLPVASTAQNINFSESIHNYTDKSEQNLASRNLKHEYFQSLNFPHTKEMMKIF
HKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSL
IVDQVQKLTSFDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPEKVCASNRLIST
LENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQK
DILTQLKIPRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLDWIRKHHPHDSGIIYCLSRR
ECDTMAGTLQKDGLAALAYHAGLSDSDRDEVQHKWINQDGCQVICATVAFGMGIDKPDVR
FVIHASLPKSMEGYYQESGRAGRDGETSHCLLFYTYHDVTRLKRLIMMEKDGNHHTKETH
FNNLYSMVHYCENITECRRIQLLAYFGENGFNSNFCKKYPDVSCDNCCKTKDYKTKDVTD
DVKNILRFVQEHSSSQGTRNIKHIGPSGRLTMNMLVDIFLGSKSAKIQSGMFGKGSAYSR
HNAERLFKKLILDRILDEDLYINANDQAIAYIMPGDKAQTVLNGHLKVDFMETENSSNVK
KQKASVAKVSQREEMVKKCLGELTEVCKSLGKVFGVHYFNIFNTVTLKKLAESLSSDPEV
LLQIDGVTEDKLEKYGAEVIAVLQKYSEWTLQAENSSPGMSLSSNRGTRRNTHEELDEET
PVSSHYFANKTRNERKRKSMPASHRPKRRKTVYSGSKMKGGSTTYRKISSKTKSSNIIGS
SSALHGSQATSGASRKLGIMAPPKPINRPFLKPSYAFS
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgttcctcaaaataatctacaggagcaactacagcgtcactcagccaggaaa
cttaataataaattaagtctttcaaaaccaaaatcttcaggtttcacttttaaaaagaaa
acatcttcagataacaatgtatctgtaactagcgtgtcagtagccaaaacgcctgtgtta
agtaataaaggtgttaatgttactgaggccttttccttcagtgtacctctgtcccacacc
acaagtcagcagacaaggatcgatgactttaaaaatgctccagcaggacagcagacccag
agagttggttcaaaaccattattgccagatttgttgcagattccgaagaaagttttatgc
actacccaaaacacgccaactgtaaagaaaccccgtgatgctgctttcaagaagttagaa
tttagttcttcaccagattcttttagtaccattaatgattgggatgatatggatgacttt
gatacttctgggacttcggaagcatttgttacaccactcaaaaatcacttcgtaagagta
agcactgctcagaaatcaaaaaaggccaagggaaactttttaaaagaacagctgtataaa
acaaatacagtaaaggctgatttgactccttcctcctctgaaagcaagcaagtagatttg
actaagggtcagaaggatgactcagaatggttaagtagcgatgtgatctgtatcgatgat
gaccccatttctgaagtacctataaatgaagatactcaagaaagtcactcttcgaaaaca
catttgggagatgaaagagataatagtgaaaagaagaaaaatttggaagaagccgaatta
cattcaactgagaaagttccatgtattgaatttgaacatgatgattatgatatagatttt
gttccaccttctccagaagaagaaattatttctgctgcttcttcctctttaaaatgcttt
agtatgttaaaggaccctgacacttctgacaaagagaaggacgttcttagcacaacaaaa
gatattttgttaaaacctgagaaaattactgcacaggagcctaatctagaaaccagcaca
gactgtgacgctagacagctaaatttacagcagcagcttattcgtgtgatggaccacatc
tgtaaattaatcgatgctatccctgctgaaaaactgaaagctttggattgcgggaacgaa
ctacttgagcaacggaacataagaaggaaactcctagctgaagcagattttaatagaagt
gatgccagtcttcttggctcagtgtggagatgcaggcctgattctcttggtagtcctgtg
gagggtgattcttctcctggggagaattttatgaaggagttaaattttccacaccttccc
tcaaattcagttttccctggggaatgtttactgaccaccaccccaggaaagacaggattc
tcagccaccacaaagaatcactttgaaaggccgttattcaattcccatttacagaagtcc
tttgtaagtagcaactgggctgaaaccccaaagctagaaaaaagaaatgaaagctcttat
ttcccaggaaatattctcacaagcactgctgtgaaagatcaaaataaacacactgcttca
ctaaatgacttagaaatgcaagcttcctatgatattgataattttggcatagatgatttt
gatgatgatgatgatgatgactgggaaaatataatggataatttagcagccagcaaatct
tccacagctgcctatcaatctatcaaggaaggtcggccaattaaatcagtatcagaagga
atttcttcagccaagacaaactgtcttccagtggcatctactgctcaaaatataaacttc
tcagagtcaattcacaattacactgacaagtcggagcaaaatttagcatccagaaatctg
aaacatgagtatttccaaagtcttaattttcctcatacaaaagaaatgatgaagattttt
cataaaaaatttggcctgcataattttagaactaatcagctagaggcgatcaatgctgca
ctgcttggtgaagactgttttatccttatgccgactggaggtggtaaaagtttgtgttac
cagctacccgcctgtgtttctcctggggtcactattgtcatttctcccttgagatcacta
attgtagatcaagtccaaaagctgacttcttttgatattccagctacatatctgacaggt
gataagactgactcagaagctacaagtatttacctccaactatcaaagaaagacccaatt
ataaaacttctgtatgttactccagaaaaggtctgtgcaagtaacagactgatttctact
ttggagaatctgtatgagaggaagctcttggcacgttttgttattgacgaagcacattgt
gtcagtcagtggggacatgattttcgtcaagactacaaaagaatgaatatgcttcgtcag
aagtttccttctgtcccagtgatggctcttactgccacagctaatcccagggtgcagaaa
gacatcctcactcagctgaagatccccagacctcaggtgtttagcatgagctttaacaga
cataatctgaaatactatgtattaccaaaaaagcctaaaaaggtggcatttgattgctta
gactggatcagaaagcatcacccacatgactcagggataatttattgcctttccaggcga
gaatgtgacacaatggctggcacgttacagaaagatggtcttgccgctctggcgtaccat
gctggcctcagtgactctgaccgagatgaggtgcagcacaagtggattaatcaggatggc
tgccaggtcatctgtgcaacagttgcatttggaatggggattgacaaacctgacgtacga
tttgtgattcatgcttctctccctaagtccatggagggttactaccaagaatccggtaga
gctggaagagatggggaaacttctcactgcctgcttttctatacctatcatgatgtgacc
agactgaaaagacttattatgatggaaaaagatggaaatcatcacacaaaagagactcac
ttcaataatttatatagcatggtacattactgtgaaaatataacagaatgccggagaata
cagcttttggcttactttggtgaaaatggatttaattctaatttttgtaagaaataccca
gatgtttcttgtgataattgctgtaaaacaaaggattataaaacaaaagatgtgactgat
gatgtaaaaaatattttaagatttgttcaagaacatagctcatcacaaggaacgagaaat
ataaaacacattggtccttctggaagattgactatgaatatgctggtcgacattttcttg
gggagcaagagtgcaaaaattcagtcgggtatgtttggaaagggatctgcttattcacga
cacaatgcggaaagactttttaaaaagctgatacttgacaggattttggatgaagactta
tatatcaatgccaatgaccaagcaattgcttatataatgcctggagataaagcccaaact
gtactaaatgggcatttaaaggtagactttatggaaacagaaaattccagcaatgtgaag
aaacaaaaagcttcagtagcaaaagtatctcagagggaagaaatggttaagaaatgtctt
ggagaacttacagaagtctgcaagtctctggggaaagtttttggtgtccattatttcaat
atttttaatactgtcactctcaagaagcttgcagagtctttatcttccgatcctgaggtt
ttgcttcaaattgatggtgttactgaagacaaactggaaaaatatggtgcagaagtgatt
gcagtattacagaaatactctgagtggacattgcaagctgagaacagttccccagggatg
agcctgtccagcaacagaggcaccagaagaaatacccatgaagagctcgatgaggaaaca
cccgtatcttctcactactttgcaaataagaccagaaatgaaagaaagaggaaaagtatg
ccagcctcccacagacctaagaggaggaaaactgtttatagtggttccaagatgaagggg
gggtccaccacatacagaaagatatcttccaaaactaaatcctccaacataattggatcc
agttcagccttacatggttctcaagcaacatcaggagccagtagaaaattggggattatg
gctccaccaaagcctataaatagaccgtttcttaagccttcatatgcattttcataa
DBGET
integrated database retrieval system
