Propithecus coquereli (Coquerel's sifaka): 105810476
Help
Entry
105810476 CDS
T08746
Symbol
RFC1
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03030
DNA replication
pcoq03410
Base excision repair
pcoq03420
Nucleotide excision repair
pcoq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105810476 (RFC1)
03410 Base excision repair
105810476 (RFC1)
03420 Nucleotide excision repair
105810476 (RFC1)
03430 Mismatch repair
105810476 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcoq03032
]
105810476 (RFC1)
03400 DNA repair and recombination proteins [BR:
pcoq03400
]
105810476 (RFC1)
DNA replication proteins [BR:
pcoq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105810476 (RFC1)
DNA repair and recombination proteins [BR:
pcoq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105810476 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
nSTAND3
RuvB_N
AAA_16
AAA_33
AAA_18
Abhydrolase_8
Motif
Other DBs
NCBI-GeneID:
105810476
NCBI-ProteinID:
XP_012499924
Ensembl:
ENSPCOG00000026288
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
METCLFTVTGAASQEDLIDSRDIRKFFGVKPSGKKLVTETVKKNEKTKSAEETLKGKKGI
KEIKFYFPLTDSESEETMQVKDAKKQPEKLPLTSKPGKILRQDPVTYISETDEEDDFMCK
KAASKSKENGGSTNSYLGASNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTRSVQRSDK
KMVASKRKEPPQNTDDSGLNDEAIAKQLQLDEDAELERQLHDDEEFARTLAMLDEEPKTK
KARKNTEEGKTFSSVQGNLSKAEKHTFPHTVRTELFSDERKSYSPKKQTKCESLKESQQH
SKPSAHKIGESFSPKASSKLVLTKKKESSYKETEPATLKRKENAIELKGETKTPKKTKSS
PAKKESVSPEDSEKKRSNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLES
IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIR
TMPGKKSKYEIAVEAEMKKEKSKLEKTPQKNDQGKRKISPTKKESESKKSKLTPKRDSSI
KSIQKETSVFRRGLDFKEQVAEEVNGDSKARDLADGRSENKVENLLWVDKYKPTSLKTII
GQQGDQSCANKLLRWLRNWHESSSEDKKHAAKFGKLAGKDDGSSFKAALLSGPPGVGKTT
TASLVCQQSGMYYVLYNFLXSKFLNSWYFVFVPSLCPSAWAGGAACSGSTKHVLIMDEVD
GMAGSEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLIRSLVHYCFDLRFQRARVEQ
IKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCAGNKALTYDQAKADSHR
AKKDIKLGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVHENYLHVKPVAAGG
DVKKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPTF
PSWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHVRDALVQPLTSQGVEGVR
DVVALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQA
VKTARHSTGPSLDSEYNEELNEDDSQSDEKDQDAVETDAMIKKKTKSSKASKPEKDKESR
KGKGKSLKK
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggaaacctgtcttttcactgtcacgggagcagcctctcaggaagacttaatagattct
agggacattcggaaattctttggagttaaaccaagtggaaagaaacttgtaactgaaaca
gtaaagaagaatgagaaaacaaagtctgctgaagaaactttaaaaggaaaaaaaggaata
aaggaaatcaagttttattttcctctcacagattcagaatcagaggagacaatgcaggta
aaagatgccaaaaagcaaccagaaaaattgccattgacttctaaacctggtaaaatttta
cggcaggatcctgttacatacatttcagaaacagatgaagaagatgactttatgtgtaag
aaggcagcctctaaatcaaaagagaatggaggatctacaaatagttatcttggagcatca
aatatgaaaaagaacgaagaaaacactaagaccaagaataagcctttatcaccaataaaa
cttacacccacatcagtgcttgattattttggaactagaagtgtccaaagatcagacaag
aagatggtggcaagcaaaagaaaagagcctccacaaaatacagatgattccggattaaat
gatgaagccattgccaagcagttgcaacttgatgaagatgcagagctggagaggcaacta
catgacgatgaagagtttgccagaacattagccatgttagatgaagaacccaagactaaa
aaggctcgaaagaacacagaagagggaaaaacgttttcatctgtccaaggcaatttaagt
aaagcagaaaaacatacatttcctcacacagtaagaacagaactattttcagatgaaaga
aaaagctacagtcctaagaagcaaactaaatgtgaaagtttaaaagaatctcagcaacat
tctaaaccatcagctcacaaaataggagaatccttttctccaaaagccagttctaagttg
gtacttacgaaaaaaaaagagagctcttataaagaaacagagcctgcaaccttaaaaaga
aaagaaaatgccattgaattgaaaggagagacaaaaactccgaagaagaccaaaagttct
ccagctaaaaaagagtctgtaagtcctgaagattctgaaaagaaacgtagtaattatcaa
gcttatcgaagctacttaaatcgggaaggtcccaaagctctgggctccaaagaaatacca
aagggagctgaaaattgcctggaaggcctcacatttgtaatcacaggcgtgctggaatcc
attgagcgagatgaagccaagtctctaattgaacgttatgggggaaaagtaacaggaaat
gtcagcaagaaaacaaactaccttgtcatgggccgcgatagtggacagtccaagagtgac
aaggcagcagccttggggacaaaaattatcgatgaagatggcctattaaatctgattcga
actatgccaggcaagaagtccaagtatgaaatagcagttgaagctgagatgaagaaagaa
aagtccaaattggagaaaacacctcaaaaaaatgaccaaggaaaaagaaaaattagtcca
actaaaaaggaatcagaatctaaaaagagcaagctgacgcccaaaagggacagttccata
aagtcaatacaaaaggaaacaagtgtgtttaggagaggcctggactttaaggagcaggtg
gccgaggaggtcaatggtgacagcaaggccagggatttggctgatggtcgcagtgaaaac
aaagtggaaaatttgctctgggtggataaatataagcccacatcgcttaagaccattatt
ggacaacaaggagaccagagctgtgccaacaaactcctacgctggctccgaaactggcac
gagagttcttcagaagataaaaaacatgcagcaaagtttggtaaacttgccggcaaagat
gatggctctagctttaaagcagcgttactctcaggccctccaggtgttggcaaaaccacc
acagcttctctggtgtgtcagcaatctggcatgtattatgtgttatataatttcctataa
agcaagtttttgaacagttggtattttgtttttgtcccttccctttgcccctccgcctgg
gccggtggagcagcctgttcaggaagtacaaagcacgttctcatcatggacgaggtggac
ggcatggcaggcagtgaggacaggggcggaattcaggaattaattggcctgataaaacat
accaaaattcccattatttgtatgtgcaatgatagaaatcatcccaagattcgctctttg
attcgctctttggttcattattgttttgatcttcgttttcaaagagctcgggttgaacag
attaagggtgctatgatgtctattgcatttaaagagggcttaaagattccccctccagct
atgaatgaaataattttgggagccaatcaagatatcagacaggttttacacaatctcagt
atgtggtgtgcaggaaataaggcattaacgtatgaccaggccaaggctgattctcacagg
gccaaaaaggatattaaactgggcccatttgatgttgcccggaaagtgtttgcagctgga
gaggagactgctcatatgtcacttatggacaagtcagatctcttttttcatgattattca
atagcacccctctttgtccacgagaactacctacatgtgaagcctgtagctgcagggggc
gacgtgaaaaagcacttgatgcttctgagccgagcggcagacagcatatgtgacggcgac
ttagtagacagccagatccggagtaagcaaaactggagccttctgcccacacaggccatt
tatgccagcgttcttcctggagagctgatgagggggtacatgacccagttccccaccttc
ccgagctggctggggaagcactcgtctacaggcaaacatgaccgtattgttcaggacctg
gcattgcatatgagtctcagaacttactccagcaaaaggactgtgaacatggattatttg
tcacacgtaagggatgcacttgtacagcccttgacctcacaaggggtagaaggagtacgg
gatgttgttgcacttatggacacatactatctgatgaaagaagactttgagaatatcatg
gaaattagcagctggggaggcaaacctagtcccttctccaagctggatcccaaggtgaaa
gcagccttcacaagagcttataacaaggaggcccacctcaccccgtattcacttcaggca
gtgaagacagcgaggcacagcacaggcccgtcgctggattctgaatacaacgaagagtta
aatgaggatgactctcagtcggatgagaaagaccaagatgctgtagaaactgatgccatg
atcaagaaaaagaccaaatcttcaaaggcttcaaaaccagaaaaagataaggagtccaga
aaaggaaaaggaaaaagtttgaagaaatga
DBGET
integrated database retrieval system
