Propithecus coquereli (Coquerel's sifaka): 105810922
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Entry
105810922 CDS
T08746
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03440
Homologous recombination
pcoq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105810922 (PALB2)
03460 Fanconi anemia pathway
105810922 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoq03400
]
105810922 (PALB2)
DNA repair and recombination proteins [BR:
pcoq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
105810922 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
105810922 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
105810922
NCBI-ProteinID:
XP_012500430
Ensembl:
ENSPCOG00000007601
UniProt:
A0A2K6ELA3
LinkDB
All DBs
Position
Unknown
AA seq
1187 aa
AA seq
DB search
MDEPPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRARRAEKVKNTIKKTVEEQDCLPR
QEISPQLNHSEPKNKVSLCDTKSQINTHFDEKTGEKTSITLDVESGSFNPGDGPEGLLIQ
STDDIQEHLSPRASGPDGKKRQSKMPGRSKKQQKRTCISQERQCVFDADSLILSEKRLQG
EICSKNPKSPVTEIRTHLSSPLKSELPDCPGPVTEHDGEGILIPPTAKPERSVDRLLRRT
NFPKETTIPLHTSPDSSNSQYLEHMPPKGNCELIAQGLKNISLASSINLEAQGKKMTILT
DNPVVNKAVSASGQLARSHNLEADNSCFINEVTYSNLPANENPNLKEQNHTETSLQSPSN
ALDGRNECLRENKTLGQSKSLCLEASSPVSIENQTHSCTMLEGLLFPAEYYVRTTRHMSN
CQRKVALEAVIQSHLGVRKKGSKNKNKKASENLHLSNEKTDQSEIRISDTHTGQPNSRSP
QKHLSLTKVKPPNGPTEDNDFSRKAVTQLTGRRHRGKRKSTCISALDHHERLLPTSGTLD
INSSGEEVILHKYRNKTAIIHGKKVQGKEGHHQKEDFLSSSDNAYLALDNDAFSVPFHKN
EMLSLKQLSSFLNIIDFQLPDEDFGPLKLEKLKSCSEKLIEPFESNIYGERHLKEENCIT
VLEELIPKQTDTEIEDLKEDLTDLPGKSHPKMSDLKSQPTNKGLSSSILLFTPLNTVAAD
DSDRPTADMCSPAFPILGTTPAFGSQACYDKGSTEGVGQTCSTPQVSLLKDTVSLAGDST
TSPPKLDISLHVSGRQRQPTCDCDSGPQTTPLPVESYTFKENQLSGNTCQELCKHSIEQT
EIADLPACDSLNPGNLQLVSKLKNPSGSCSVDVSAMWWERAGLKEPCIITACEYVVSLWK
PLDTWQWKNIYTWHFTEVPVLQIVPVPDVCNLVCVALGNLEIRELRALFCSPDDGSEKQV
LLKSGNIKAVLGLTKRRLVNSSGTLCDQQVEIMTFAEDGGNKEKQFLMPPEETVLTFAEV
QGLQEALLGTTVMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFVILSHPCA
KESESLGSPVFQLIVINPKTTLNVGVMLYCLPPGQAGRFLEGDVKDDRAAAVLTSGAVAI
WDLLLGHCTALLPPVPDQNWSFVKWSGTDSHLLAGQKDGNIFVYRYS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcctcccgggaagcccctcagctgtgaagagaaggaaaagttgaaggaaaaa
ttagcattcttgaaaagggaatacagcaagacactagcccgccttcagcgtgcccgaaga
gctgaaaaagttaagaatactattaagaaaacagtagaagaacaagattgcttgccccgg
caggaaatctcaccacagctaaaccactcagaacctaaaaataaagtgtctctttgtgac
acaaagtcacaaatcaacacccattttgatgaaaaaactggagaaaagacatctatcaca
cttgatgttgagtctgggtcctttaaccctggagacggcccagaaggattacttatacaa
agcacagatgacatccaagaacatctttcccccagggccagtggtcctgatggtaagaaa
aggcagagtaagatgcccgggaggagcaagaagcagcagaagagaacatgtatttcacag
gagagacaatgtgtctttgacgcagattcactcatactctctgaaaaaagactacaggga
gaaatctgtagcaaaaatcctaagtcaccagtaactgaaataagaactcacctttcaagt
cctctcaagtctgaacttccagattgtccaggaccagttacagaacatgatggagagggt
atattaattccaccaactgccaaaccagaaagaagtgttgatagactcctaagaagaact
aatttccccaaggagactacaattcctttgcatacttcaccagatagcagtaatagtcag
taccttgaacatatgcctcctaaaggtaactgtgaacttattgctcagggtttaaaaaac
attagccttgcttcatctataaacttggaggcacaaggcaaaaaaatgactatacttaca
gataacccagtagtaaataaagctgtaagtgcaagtggccaactagctagaagtcataat
ttagaggcagataattcatgttttataaatgaagtcacttacagtaacttaccagcaaat
gaaaacccaaacttaaaagaacaaaatcatacagagacatctttacaatctcccagtaat
gctcttgatggtagaaatgaatgtcttcgggaaaataagactctaggtcaatctaagagt
ctttgcctagaagcaagctctcctgtttctatagaaaatcaaacacattcttgcacaatg
cttgaaggccttctgtttcctgcagaatattatgttagaacaacacgacacatgtcaaat
tgccagagaaaagtagctctggaggctgtaattcaaagtcacttgggtgtcaggaaaaaa
gggtctaaaaataaaaataagaaagcaagtgaaaatttacacctttccaatgagaaaact
gaccaaagtgaaattaggatttctgacacacatacaggacaaccaaattcaagaagtcct
cagaaacatctctcattaactaaagtcaagcctcccaatgggcccactgaagataatgat
ttttctaggaaggcagttacccagctaactggcagaagacacagaggaaaaagaaaatca
acctgcatctcggcattagatcatcatgaacgacttttgccaacttctggtacattggac
attaacagttctggggaggaagtcatcttgcacaaatatcggaacaaaacagcaattatt
catggtaagaaggttcaagggaaggaaggtcatcatcaaaaagaggacttcctgtcttcc
agtgataatgcttatttagctttggacaatgatgctttcagtgttccttttcataaaaac
gaaatgctgagtttaaagcaactgtcatcttttctcaatatcatagacttccagttacct
gatgaagactttgggcctcttaagcttgaaaaactgaagtcctgctcagaaaaactgatt
gaaccttttgaatcaaatatttatggagagaggcatcttaaggaggaaaactgcattact
gttctggaggaactgattcctaaacaaacagacacagagatagaggacttgaaagaggac
cttactgatctaccaggaaaatcacatcctaaaatgtcagacctaaaaagccagcctaca
aataagggcctctcttcatccatattacttttcactcccttaaatactgttgcagctgat
gatagtgacagacctactgcagacatgtgttcacctgctttccccatcttaggtactact
ccagcttttggctcccaagcatgctatgataaagggtctacagagggtgttggacaaact
tgctctacaccccaggtttctctcttgaaagacacagtcagtcttgctggtgatagtaca
accagcccaccaaaactggatatcagcctgcatgtttcaggtaggcaaagacaacctacc
tgtgactgtgactctggcccccaaacaacacctctacctgtggagtcatacactttcaaa
gaaaatcagctctctggaaatacatgccaggagttatgtaaacattccattgaacagact
gaaatagcagatcttcctgcttgtgatagcttaaacccaggcaacctacaattggtttca
aagttaaagaatccttcaggctcctgttccgtggacgtcagtgccatgtggtgggaaaga
gctggtcttaaagagccatgtatcataactgcttgtgaatatgtagtttctctttggaaa
cctctggacacttggcagtggaaaaacatttatacctggcacttcacagaggttccagta
ttacaaatagttccagtgcctgatgtttgtaatcttgtgtgtgtagctttgggaaatttg
gaaatcagagaactcagggcattattttgttcccctgatgatggaagtgaaaagcaggtg
ctactgaaatctggaaatataaaagctgtgcttggcctaacaaagaggaggctagtgaat
agcagtgggaccctttgtgatcaacaagtggaaatcatgacatttgcagaagatggagga
aacaaagaaaaacagtttttgatgccccccgaagaaactgtactaacttttgctgaggtc
caagggctgcaggaagctctgcttggtactactgtcatgaacaacattgttatttggaat
ttaaaaactggtcaactcctgaaaaagatgcacattgatgattcttaccaagcttcagtc
tgtcacaaagcctattcagaaatggggctcctatttgttattctgagtcatccttgtgcc
aaagagagtgagtcgttgggaagtcctgtgtttcagctgattgtgattaatcctaaaacg
accctgaatgtgggtgtgatgctgtactgtcttcctccagggcaggctggaaggttcctg
gaaggtgacgtaaaagatgatcgtgcagcagcagtcttgacttctggagcagttgccatt
tgggacttacttcttggtcattgcactgctctccttccacctgttcctgaccaaaattgg
tctttcgtgaaatggtcaggtacagattctcatttgctggctggacaaaaagatggaaat
atatttgtataccgctactcataa
DBGET
integrated database retrieval system
