Propithecus coquereli (Coquerel's sifaka): 105810966
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Entry
105810966 CDS
T08746
Symbol
VPS13C
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13C
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoq04131
]
105810966 (VPS13C)
Membrane trafficking [BR:
pcoq04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
105810966 (VPS13C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_M
VPS13_N
VPS13_VAB
VPS13_C
WWE
Motif
Other DBs
NCBI-GeneID:
105810966
NCBI-ProteinID:
XP_012500487
Ensembl:
ENSPCOG00000025107
LinkDB
All DBs
Position
Unknown
AA seq
3230 aa
AA seq
DB search
MVLESVVADLLNRFLGDYVENLNKSQLKLGIWGGKREGRGRRAAGAEGPRRGLLPPGSCP
GPAQSAARDSASGQAPCGTPSRCDRSEVLEACARPGPPRAPGLPRSPPGMGRNSTQTWCF
GNHSARKFCHTTHYREIPELYGKGESSLVTWQPPPFFAKTSCFNREMERYELDVPFKVKA
GQIDKLTLKIPWKNLYGEAVVATLEGLYLLVVPGAKCMSNQMIRCLLNALHSGYCCHADA
GAHSGEFIYGLENFVYKDIKPGRKRKKHKKHFKKPFKGLDRSKVFQPISASAKLYMNPYA
ETELKTPKLDWNIEVQNIAIELTKPQLMQLDSLSAYWNVNCSMSYQGSREQILVIRSGQK
LRKKSADKGEKRGGWFSGFWGKKESKKKDEESLIPERLTHIIETRKVLDLRINLKPSYLV
VPQTGFHHEKSNLLILDFGTFRYVAHIMTLKLVSTSITIREDRNIPEILKIQVIGLGTQV
SQRPGAQALKVEAKLEHWYITGLRQQDTIPSLVASIGDTASSLLKIEFETNPDNSPADQT
LIFESQPVEVIYDAKTINAVVDFFQSNKGLDLEQITSATLMKLEEIKEKTATDRLYSPEL
ILAAAGKGEKEVELELNSNGLNSKDQGLQKTTNSSLEEIMDKAYDKFDIEIKSVQLLFAR
AGVLNSCYFRFKVTGGLPLMHVRISDQKMKDVLCLINSIPLPQKSSAQSPERQFVDKHGS
KKKPLHLISSSDKPGLDLLKVEYIKADKNGPSFQTTFGKTEQTVKVAFSSLNLLLQAQAL
LSSINYLTTIIPSDNQDIGVAKEVQIPPEKQQKNSTLQKGMKTHFNFLLERNFLNNFQTA
KESLSAATAQAAEKAATSVKDLAQRSFRASINIDLKAPVIIIPQSSVSTNAVVVDLGLIR
VQNQFSLVSGEDYVNPPVIDKMDVQLTKLTLSRTVIQPGISHPDIQMLHPINLEFFVNRN
LAASWYHKVPVVEIKGHLDSMNVSMXVKKTSLLKSXTLKTFSVXIQRKCRILYRMAXEKF
QXDIVQQGEIKEPLEISISQQDVHASKDTLTTGVEEIRSVDIINMLLNFEIKEVVVTLMK
KAEKKGRPLQELNILHLGMEARVKTYDMTAEAYLKKISMRCFDFTVSSNASQKDVFDLKV
TAELNAFNIFICDQKCNIADIKIHGLDASISVKPKQTDVFARLKDIIVTNVDLLSIHKKA
VSILGDEVFRFQLTLYPDATEGAAYADMSKVDGKLSFKVGCIQIVYVHKFFMSLLTLSHL
GILSQVSKGLLNPNGKMLALLNSKSTYLIVEMVVGRTILQAGSPQYDIEILKPVNMLLSI
QRNLSATWYVQIPGMEIKGKLKPMQVALSQDDLTTLMKILLENLGEASSQPSPTQSVQEA
MRVRKVDVPSGLDHLKEQEDLTDPKLSVNQNVTLQFDFHFESLSIILYNDDVNQESKLSL
HNDTFRLGELRLHFMASAGKMFKDGSMNVSIKLKTCTLDDLREGIERATSRMIDKKNDQD
NNSSMIDISYKQDKNGSHIDAVLYKLYVCASVEFLMIVADFFIKAVPQSPENMAKETQFP
RQTVTGKVKTEKDDSVRPNMTLKATITDPEVVFVANLTKADAPALTASFQCNLSLSTSKL
EQMMEASVRDLKVLACPFLREKRGKNITTVLQPCSLFMEKCTWASGKQNINIMVKEFIIK
ISPIILNTVMTIMAAMSPKTKEDESKDTSKEMENLWGVKSINDYNSWFLGVDTATEITEN
FQDIQHPLIEENCAVVVESIQVTLECGLGHRTVPLLLAESRFSGNIKNWTSLMVAATDMT
LEVHYYNEIHAVWEPLIERVEGKRQWNLRLDVKKNPVQDKSLMPGDDFIPEPQMAIRISS
RDTMNITISKSCLNVFNNLAKGFSEGTASTFDYSLKDKAPFTVKNAVGIPIKVRPNCNLR
VMGSPEKTDIFDVDAGQNLELEYASMEPSHQGKQSTLSRQESSYFTLTFVPHGYTEVGNI
PVARPGRRLYNVRNPNTSHSDSIVVQIDATEGNKVITLRSPLQIKNHFSIAFIIYKFVKN
VKLLERIGIARPEEEFHVPLDSYRCQLFIQPAGLLERQYKESTTYISWKEELHRSREVRC
MLQCPSAEVSFLPLIVNTVALPDELSYICTHGEDWDPAYIIHLYPPLTLRNLLPYSLRYL
LEGTAETHELAEGSTADVLHSRIGGEIMELVLVKYQGKNWNGHFRISDTLPEFFLVCFSS
DSTEVMTIDLSVHVRRIGSRMVLSVFSPYWLINKTSRVLQYRSEDVHVKHPADFRDIILF
SFKKKNIFSKNKVQLKISTSAWSNSFSLDTVGNYGCVKCPANNMEYLVGVSIKMSSFNLS
RIVTLTPFCTIANKSSLELEVGEIVSDGSVPTIKWNYIGSSECLPFWPENLSGKLCVRVV
GCEGSSKPFFYNRQDNGTLLSIEDLNCGILVDVNTAEHSTVITFSDYHEGSAPALIINHT
PWDILTYKQSGSLEQVELPPRQARLFAWADPTGTRKLTWKYAANVGEHNLLKDECGQFPY
DANIQIHWVSFLDGRQRVLLFTDDVALVSKALQAEEMEQADHEITLSLHSLGLSLVNNEI
KQEVSYIGITSSGVVWEMKPKQKWKPFSQKQIILLEQSYQKYQVSRDPGWIKLDSNFEVN
FNKVPMEMRLPIRCPIKRDFLSGIQIEFKQSRHQRSLRARLYWLQIDNQLPGAMFPVVFH
PVAPPKSIALDSEPKPFIDVSVITRFNEYSKVLQFKYFMVLIQEMALKVDQGFLGAIVVL
FTPTTDPEAERRRTKLIQKDIDALNTELMETSMTDMSILSFFEHFHISPVKLHLSLSLGS
GGEESGKEKEEMIAIHSANLLLKSIGATLTDVDDLIFKLAYYEIRYQFYKRDQLMWSVVR
HYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVEALFYEPFQGAVQGPEEFAEGLVIGV
RSLFGHTVGGAAGVVSRITGSVGKGLAAITMDKEYQQKRREELSRQPRDFGDSLARGGKG
FLQGVVGGVTGIITKPVEGAKKEGAAGFFKGIGKGLVGAVARPTGGIIDMASSTFQGIQR
AAESTEEVSSLRPPRLIHEDGIIRPYDRQESEGYDIFENRIKKLEGETYRYHCAIPGSKR
TILMVTNRRVLCVKEVEILGHMSIDWQYPFEDFVCPPSVNENVLKISVKEQGLFHKKDSA
SQGCLRKIYLKDTTTAERAYHAIEDAQSTRHQQKLMKQSSLRLLRPQIPS
NT seq
9693 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggagtcggtggtcgcggacttgctgaaccgcttcctgggggactatgtggag
aacctgaacaagtcccagctgaagctggggatctggggcggtaagcgagaggggcgcggc
cggcgggctgcgggcgctgagggcccacgccgcggactcctcccgccgggctcctgccct
ggccctgctcagtctgccgcccgagactccgcctccgggcaggcgccctgcgggaccccc
tcgcggtgcgacaggagcgaggtgctggaggcctgtgcccgccccggccccccgcgagcc
cccgggctgccgaggtcccctcccgggatggggagaaatagtactcagacttggtgcttt
ggtaaccattctgctaggaagttctgccacaccactcattatcgtgagattcctgaattg
tatggaaagggggaaagctccttggtaacatggcagcctccacctttctttgcgaagact
tcctgttttaatagggaaatggagagatatgaattggatgttccttttaaagtcaaggct
ggccaaattgataaattaactctgaagattccttggaaaaacttgtatggagaagcagtt
gttgcgaccttagagggattatacctgcttgttgttcctggagcaaaatgcatgagtaat
cagatgatcaggtgtcttttaaatgctttgcattctggttattgctgccatgcggatgca
ggcgcacattcaggggagttcatatatggcttggaaaactttgtttacaaggacatcaag
cctggacgtaaacgtaaaaagcacaaaaaacattttaagaaaccttttaaaggtcttgat
cgctcaaaagttttccagccaatatcggcctctgcaaaactctacatgaatccttatgca
gaaacagagctcaaaacacccaaactggactggaacatagaagtacaaaatattgccatt
gaactcaccaagcctcagcttatgcaacttgatagtcttagtgcctactggaatgtaaac
tgcagcatgtcttaccagggatcaagggaacagattttggtgattcggtctgggcagaaa
ctaaggaaaaagtctgctgacaaaggcgagaaacgtggaggctggtttagtgggttttgg
ggtaaaaaggaatctaagaaaaaagatgaagaatcattgattcctgaaagacttacgcat
attattgaaactcgaaaagttcttgatttaaggataaacttgaagccttcttatctagta
gttccacagacaggtttccaccacgaaaagtcaaacctgctgatcttagattttggtaca
tttcggtatgttgcccacataatgaccctgaagttagtaagcacctctattacaatcaga
gaagacagaaatattccagaaatactaaaaattcaggtaattggcctgggcactcaagta
tctcagcgaccaggagcacaagcacttaaggtagaagcaaaattagaacactggtatata
acaggtctgagacagcaagatactataccatcacttgtggcttcaattggtgatactgca
tcatccttgcttaaaatagagtttgaaaccaatccagacaatagtcctgctgaccagact
ctgatttttgagtctcagcctgtggaggtcatctatgatgctaaaaccatcaatgcagtg
gttgatttctttcaatcaaataagggattggatcttgagcaaataacatcagctacattg
atgaagctggaagaaattaaagagaaaacagctacagaccgcttgtatagtcctgaattg
atccttgctgccgctggaaagggggaaaaggaagtagaattggagctgaattctaatggc
ctcaacagtaaagatcaaggtttacagaagactactaattcatctttggaagaaataatg
gataaggcatatgacaagtttgatattgaaataaaaagtgtgcagctactctttgctaga
gcaggtgtcctcaactcctgttattttagatttaaagtaacaggaggacttcctttgatg
cacgtgagaatttctgaccagaagatgaaagatgtgctgtgtttgattaatagtataccc
ttgccacagaagtcctctgcacagtctccagagagacagttcgtagataaacacggatcc
aaaaagaaaccccttcacttgattagctcttctgataaacctggattagatcttttaaaa
gtggagtatattaaggctgataagaatggacctagttttcaaactacttttggaaaaact
gaacaaacagtgaaggtggccttttcatctttaaatctgttgctacaagcacaagctctt
ctctcttctattaattacctgacaaccattattccgtcggataatcaagacataggtgtt
gccaaggaggtacaaattccacctgaaaaacaacaaaaaaattcaactctacagaaaggt
atgaaaacacattttaatttcttgttggaaaggaacttcctgaacaatttccagacagcc
aaagagtccctgagtgccgccactgcccaggctgcagaaaaggctgccacaagtgtgaaa
gatcttgcccagaggagttttcgtgcttccatcaatattgatttgaaagcaccagttata
atcatcccacagtcttccgtttccaccaatgcagtagtggtagatctggggttaatcaga
gtgcaaaatcagttcagtctggtgtctggtgaagactacgtaaatcctccagtaattgat
aaaatggatgttcagctaacaaagctcacgctttctaggacagtgatccagccaggcatc
tcccatcctgatattcagatgttgcacccaattaacttggagttttttgtaaatcggaat
ctagctgcatcttggtaccacaaggtgcctgttgtagaaattaaaggacatcttgattca
atgaatgtaagtatgtgagtgaagaaaacttcgttattgaaatcttaaactctgaagact
ttctcagtataaatccaaaggaaatgtagaattttataccgaatggcgtaagaaaaattt
cagtgagacattgtccaacaaggtgaaattaaagagccccttgaaatctctatatcacaa
caagatgtacatgcttcaaaagatactttaacaactggagtggaagaaattagatctgta
gacatcattaatatgctgctgaattttgaaattaaagaggttgtggttactttgatgaaa
aaagcagaaaagaaaggaaggcctttacaggaattaaatatcctgcaccttggaatggaa
gctagagtcaaaacctatgacatgactgccgaagcttatcttaaaaaaattagtatgcga
tgctttgatttcactgtatctagcaacgcctctcagaaggatgtgtttgatttaaaggtc
acagctgaattaaatgcatttaatatctttatctgtgatcagaaatgtaacattgcagat
attaaaatacatggattggatgcctctatttctgtgaagccaaagcagactgatgtgttt
gccagacttaaagatatcatagttacaaatgtagatttgctgtccattcacaaaaaggcc
gtctctattttgggagatgaagtctttaggttccaactgactctttatcctgacgccaca
gaaggagcagcctatgctgatatgtctaaagtggatggcaaacttagtttcaaagtgggt
tgtattcagattgtttatgttcataaattcttcatgtctcttttgaccttgtcacatttg
ggaattctcagtcaggtatctaaaggattattgaatccaaatgggaaaatgttggctcta
ttgaatagcaagagtacttatttgattgtggaaatggttgttggcagaactattttgcaa
gctggttctccacaatatgacatcgaaattttaaaaccagtcaacatgcttttgtccata
cagagaaatttatcggcaacatggtatgtgcaaattcctgggatggagataaaaggaaaa
ctaaaacctatgcaggttgctctcagtcaagatgacttgacaactttaatgaaaattttg
ctagaaaatcttggagaagcttcttcacagccaagccccacccagtctgtgcaggaagcc
atgagagtgagaaaagtagatgtcccaagtggacttgaccacctcaaagaacaggaagat
ttgacagacccaaagctttctgtgaaccagaatgttactctccagtttgactttcacttt
gaatctctttccattattctttataacgatgatgtcaaccaggagtccaaactttcatta
cataatgacactttccggcttggtgaactcagactacattttatggcctccgcagggaag
atgtttaaggatggctcaatgaatgtcagcattaaacttaagacgtgcacccttgatgat
ctcagagaaggcattgagagagcaacatcgagaatgattgacaaaaagaatgaccaagat
aacaacagttctatgattgatataagttacaaacaagacaaaaatggaagtcacattgat
gctgttctttacaagctgtatgtatgtgccagtgtggaattcctgatgatcgtggcagat
ttctttatcaaagctgtgcctcagagtccagaaaatatggcaaaagaaacacagtttcca
agacagactgtcacagggaaagttaagacagagaaagatgactctgtgagaccaaacatg
actttaaaggccacaattacagacccagaagtggtatttgttgccaacctgaccaaggct
gatgctcctgctctgacagcctcattccagtgtaacctctctctgtcaacatccaaactt
gagcagatgatggaagcttctgtgagagatctgaaagtgcttgcttgcccttttctcaga
gaaaagagagggaaaaacattaccacagtgttacagccgtgctctttatttatggaaaaa
tgtacatgggcttcaggaaaacaaaatataaatattatggttaaagaatttataattaag
atttcacccataattcttaatactgtgatgacaatcatggctgctatgtcgccaaagaca
aaagaagatgaatccaaagatacatctaaggaaatggaaaatctttggggtgtcaaatct
attaatgattataactcttggtttcttggtgttgacacggcaacagaaataacagagaat
ttccaagacatccaacatccattgatagaggaaaattgtgctgttgttgtggagtcaatt
caagttaccttagaatgtggccttgggcatcgaactgtccccttattattggcagaatct
aggttttcaggaaatattaaaaattggacttccctaatggttgctgctactgatatgaca
ctagaggttcactattacaatgagatccatgctgtctgggagccactgattgagagagta
gaggggaagagacaatggaatttaaggcttgatgtaaagaagaacccagtccaggataaa
agtttgatgccaggagatgattttattcctgaaccacaaatggcaattcgtatttcttca
agagatacaatgaatataacaatatccaaaagttgtcttaatgttttcaacaatttagca
aaaggtttttcagagggtacagcttctacttttgactactctttaaaagacaaggctcct
tttacggtaaaaaatgctgtgggtattcccattaaggttcggcccaattgtaatctcaga
gtaatgggctctcctgagaaaactgatatttttgatgttgatgctggccagaatttggaa
ttggaatatgccagcatggaaccttcacatcaggggaaacaatctacattgagccgtcaa
gaaagctcctacttcactctgacctttgtacctcatgggtatacagaagttgggaatatc
cctgttgccagacctggacggcgattgtataacgtacggaatcccaacaccagtcattcc
gactccatcgtggtacagattgatgcaactgaagggaataaagtaatcacccttcgctca
cctctccagattaaaaaccatttctctattgcatttatcatctataaatttgttaagaat
gttaaactattggagcgcattggaatagccagacctgaagaggagttccatgttccttta
gattcatatagatgtcaattgtttattcagccagctggactcttagagcgtcagtacaaa
gaatccaccacttacatttcctggaaggaagaacttcacaggagcagggaagtcagatgc
atgttgcagtgtccgtcagcagaagtcagcttcttacctctcatagtgaatacagttgct
ctgcctgatgaattaagctacatatgtacacatggggaagactgggacccagcttatatt
attcatctttatcctcctctcactttgcggaatcttctcccgtattctctaagatattta
cttgagggaacagcagaaactcatgagctggcagaaggcagtactgccgatgttctacat
tcgagaatcggtggagaaataatggaattagtcctggtgaaataccagggcaaaaactgg
aatggacatttccgcataagtgatacacttcccgaattctttcttgtgtgtttttcttct
gactccacagaagtgatgacaattgacctgtcggtacacgtcaggcgaattggcagccgg
atggtgctgtctgtctttagtccctattggctaatcaacaagacttctcgcgttctgcag
tatcgttcagaagatgttcatgtgaaacatccagctgatttcagggatattattttattc
tctttcaagaagaagaacatttttagtaaaaataaggtacaattaaaaatttcaactagt
gcctggtctaatagtttctcgttggacacagtgggaaattatggttgtgtgaagtgtcct
gccaacaatatggaatacctggttggtgttagcatcaagatgagcagttttaatctttca
cgaatagtcactctgactcccttttgtaccattgcaaacaagtcatcattagaactagaa
gttggtgaaattgtgtctgatggctcagtgccgactattaaatggaactatattggttca
tcagagtgccttccattttggcctgaaaatttgtcaggcaaactttgtgtgagagtagtg
ggctgtgaaggatcttccaaaccattcttttataaccgccaggataatggcactttattg
agcatagaagatctgaattgtggtatcttggtggatgtaaacactgctgaacattcaact
gttataactttttctgattaccatgaaggatctgcacctgctctgataataaaccataca
ccttgggacatcctcacatacaaacagagtgggtcactggaacaagtggagttgccacca
agacaagctcgactttttgcctgggcagatcctactggtaccagaaaacttacctggaaa
tatgcagcaaatgttggggaacacaatctgttaaaggatgaatgtggacagtttccctat
gatgcaaacattcagatacactgggtatcatttctggatgggcgccagagagttttgctt
ttcaccgatgatgttgccttggtttccaaagcactgcaggcagaagaaatggaacaggcc
gatcacgaaataaccttgtctctccacagtcttgggctttcactggttaacaatgaaatc
aaacaggaagtttcatatattgggataaccagttctggtgttgtttgggagatgaaacca
aaacagaaatggaagccgtttagtcaaaagcagataatcttattggaacaatcctatcag
aaataccaagtttcaagagaccctggctggattaagctagacagtaattttgaggtcaat
tttaataaagttccaatggaaatgcgccttcctattcggtgccctataaaacgagatttt
ttatcagggattcagattgaatttaagcagtctcgtcaccagagaagtttaagggccagg
ttgtactggcttcagattgataatcaattaccaggtgcaatgttccctgttgtatttcat
cccgttgcccctccaaaatctattgctttggattcagagcccaaaccttttatagatgtg
agtgtcatcacaagatttaatgagtacagtaaagtcttacagtttaagtattttatggtc
ctcattcaggaaatggccttaaaagttgaccaggggtttctgggagccattgtagtactg
tttaccccaacaactgaccctgaagctgaaagaagacggacaaagttaatccagaaagat
attgatgctttaaacacagaattaatggagacttcaatgactgatatgtcaattctcagt
ttctttgagcatttccatatttctcctgttaagttgcatttgagcctttctttgggttct
ggaggtgaagaatcaggcaaagaaaaagaggaaatgattgcaattcattctgccaacctg
ttgttgaaaagcataggtgctactctgactgacgtggatgaccttatattcaaacttgct
tattatgaaattcgatatcaattttacaagagagatcagctcatgtggagcgttgttagg
cattacagtgaacagttcttgaaacagatgtatgtccttgtattggggttagatgtgctt
ggaaacccatttggattaattagaggtctgtctgaaggagttgaagctttattttatgaa
ccgttccagggtgctgttcaaggccctgaagaatttgctgagggtttagtgattggagta
agaagtctctttggacacacagtaggtggtgcagcaggagttgtatctcgaatcactggt
tctgttgggaaaggtttggcagcaattacaatggataaggaatatcagcaaaaaagaagg
gaagagttgagtcgacagcccagagattttggagacagccttgccagagggggaaagggc
ttcctgcaaggagttgttggtggagtgaccggaataataacaaaacctgtggaaggtgcc
aaaaaggaaggagctgctggattctttaaaggaattggaaaagggcttgtgggtgccgtg
gctcgtcccactggtggaatcatagatatggccagtagtaccttccaaggcattcagagg
gcagcagaatcaactgaagaagtgtctagcctccgtccccctcgcctgatccacgaagat
ggcattattcgtccgtatgacagacaggaatctgagggctatgacatttttgagaatcgt
atcaaaaagttggaaggagagacttaccgataccactgtgctattcctggaagcaagagg
acaatcctcatggttactaataggcgagtgctgtgtgtaaaggaagttgaaatcctaggc
catatgtccatagactggcagtatccatttgaagattttgtatgtcctcctagtgttaat
gaaaatgtgctgaaaatttcggttaaggagcagggtctgttccacaagaaagacagtgcc
agtcaaggctgtcttcggaaaatttacctaaaggataccaccacagcagagagagcgtat
catgccattgaggatgcacagtcaacgagacaccagcaaaaactgatgaagcaatcatct
ctgagacttctcaggccccaaataccatcttaa
DBGET
integrated database retrieval system
