Propithecus coquereli (Coquerel's sifaka): 105811310
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Entry
105811310 CDS
T08746
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105811310 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pcoq04990
]
105811310 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
pcoq04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
105811310 (SYNPO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
105811310
NCBI-ProteinID:
XP_012500944
Ensembl:
ENSPCOG00000022720
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All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MGTGDFICISMTGGAPWGFRLQGGKEQKQPLQVAKIRNQSKASGSGLCEGDEVVSINGNP
CADLTYPEVIKLMESITDSLQMLIKRPSSGTSEALISETENKNHEHLTQEGSAESTTLQI
RPSTKTQYREFFIAPVKSGVSLAEDQRSGPGCKENLKEETGLSYQRAPQMPDSQSGLLAE
EVILREKAEVGRPGTVVELQLSLSQERHKDTSGPTVALLGAEKSKSPDPDPNLQQDEIVH
INSGPASEKADPSLRSSRIIQLSRGRELRVVQGSEAGDARLPRVEVIVDCSDRQKTEGCR
LQAGKGCVDSPGEGGQSEAPPSLVSFAVSSEGTEQGEDPRSEKDHSRPHKHRARHARLRR
SESLSEKQVKEAKSKCKSIALLLTDAPEPSSKGVLMFRRRRRRARRYTLVSYGTGRPTRG
DAEEDGDEDGACAAELPGSSESEADEGEELPSDVDGGAPVVNFDWDSGLAGVERKLSSGD
KMEMLPDTTGKGALMFARRRERMDQIAALRDEDGPRAAPGPGAPTPHGTDAGPAGARGSV
SRSYLELGRGPGAGGAPETAHAQRATPTNRTAQPFPGPALQPAAPFSPTRSVTSPVADFP
APPPYSAVAPLPDALALAGSSPAQPPPWPQPAPWAQPAFYDSSERIASRDERISVPAKRT
GILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGKRGTGAGGDSGPEEDYLSLGAE
ACNFMQGASAKQKTPPPVAPKPAVKSSSSQPVTPVSPIWSPGVAPAQPPAFPTSNPSQGT
VVSSIKIAQPSYPAARSASSLNLAGPFKGPQAAVASKNYTSKPPALTPTVNAACAGALGP
SNELPGMSGKGAQLFAKRQSRMEKYVVDSDTVQAHAARAQSPTPSLPASWKYSPNVRAPP
PMAYNPIHSPSYPPAAVKSQPSAAQPSKMGKKKGKKPLNALDVMKHQPYQLNASLFTFQP
PGTKDGLPQKSPTKVNSALAMKQALPPRPVNAGSPPNVQASSVYSVPAYTSQPAFLAEAT
SPVSASPVPVGVPTSPKQESASSSYFVAPRPKFSAKKSGVTIQESGRSLSLPGRSVPPTI
ATSPWVHQPACAHSSKPTVGLERANKRPTPWEAAAKSPLGLVDDAFGPRTMQESIVANVV
SAARRKVLPGPPEDWNEKLSHVPQTQKANVGSCGRQECSVMSLANNMSTNPQYSSEVSYA
CYRQASRNDSEVMSMETRSDYSFPVADYNYNPHPRGWRRQT
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccggggattttatctgcatttccatgactggcggggcgccctgggggttccga
ctgcaaggtggcaaagagcagaagcagcccttgcaagtggcaaagattcgaaaccagagc
aaagcctccgggtccgggctctgtgagggggatgaagtggtttctatcaatggcaaccct
tgtgcagacctcacataccccgaagtcatcaagctcatggaaagcataacagactctctc
caaatgctcatcaaaagaccatccagtggaacaagtgaggctttgatctctgaaactgaa
aacaaaaaccatgagcatctcacacaggaggggtctgcagaaagtaccactctgcagatt
cgaccaagcacaaagacccagtacagagagttcttcatcgccccagtcaagagtggagtt
tccctagctgaggaccaaagaagtggtcctggttgtaaagagaacttaaaagaagaaaca
ggcctgagctaccaaagggctcctcaaatgcctgactcccaaagcggactcttggcagaa
gaagttatcttaagggagaaggcagaagtggggcggccaggcacggtggttgaactacaa
ctgtccctttcacaggagagacacaaggacactagtggccccacagtggctctcctggga
gctgaaaaatctaagtctcctgacccagaccctaacttacaacaggacgagattgtccac
ataaattcaggccctgccagtgagaaagcagacccttcgctgaggtccagcaggataatc
cagctctccaggggcagagagttgagagtggtccaggggagtgaagcaggagacgcgagg
ctgccccgggtggaagtgatcgtcgactgctctgacaggcagaagacagaagggtgcagg
cttcaggcaggaaaggggtgtgtggattctccaggggaaggagggcagtcagaagcacct
ccttctctggtatcctttgccgtctcatcagaaggcacagagcagggggaagatccacgc
tcagaaaaggaccacagcagacctcacaagcaccgagcgcggcacgcacggctcaggagg
agtgaaagcttgtcggaaaagcaagtgaaagaagcaaaatccaaatgcaaaagcatcgcc
ctcctgctcacggacgcccccgagcccagctccaagggggtgttgatgtttaggcggcgc
cggcgccgggcgcggaggtacacgttggtgagctacggcaccggccggccgacacgcgga
gacgcggaggaggacggggacgaggacggcgcgtgcgcagcggaacttccgggctccagc
gagtcggaggcggacgagggcgaggagctgccgtccgacgtcgacggcggcgcgccagtt
gtgaacttcgactgggactcggggctggcgggcgtggaaaggaaactcagcagcggggac
aagatggagatgttgccggacaccacgggcaagggagccctcatgttcgcccggaggagg
gagagaatggatcagatcgcggcgctgagggacgaggacgggccgcgggcggcgccgggc
ccgggagccccgactcctcacgggacggacgcgggcccggcgggggcgcggggctccgtg
agcagaagctacctcgagctgggccgcggccccggtgccggcggggcccccgagacggcg
cacgcgcagagggcgaccccgaccaacaggacggcgcagcccttcccggggcccgccctg
cagccggcagcccccttctccccgacgcgaagcgtgacgagccccgtcgccgacttccct
gcgccgccgccttactcggcggttgcccctctgcccgatgccctcgccttagcgggctcg
agcccggcacagccccctccgtggccccagccagccccttgggcccagcccgccttctac
gactcttctgagcgcatcgcctcccgggacgagcggatctccgtgcctgcaaagagaaca
ggcatcctgcaggaggccaagaggagaagcaccacgaaacccatgtttacttttaaagag
cccaaagtcagcccaaatcctgaactcttgtcactccttcaaaattcagaaggcaaacgg
ggcactggagctgggggtgattccgggccggaagaagactacctcagcctgggggcagag
gcctgtaatttcatgcagggcgcctctgctaagcaaaagaccccacctcctgttgctccc
aaacctgcagtcaagtcctcgtcctcccagccagtaactccagtgtccccaatctggtct
ccaggagtggctccagcgcagcctcctgccttccccacgtcaaacccgtcgcagggcact
gttgtctcctcgatcaaaatagcccagccttcctaccctgccgcccggtccgccagctct
ttgaacctggctggtcccttcaaagggccacaagcagcagtagccagtaagaattacaca
tctaagccaccagctcttaccccgacagtcaacgctgcttgtgctggtgcactgggacca
tccaatgagcttccgggaatgagtgggaaaggagcccaactcttcgccaaaaggcagtcg
agaatggagaagtatgtggtcgattcagacacggtgcaggcccacgctgctcgagcccaa
tctcccactccctctctgccggccagttggaagtactcgcccaatgtccgagcacctcct
cccatggcctacaatcccatccactccccctcctaccctccggctgctgtcaagtctcag
ccgtcagccgcacagccctccaaaatgggcaagaaaaagggcaagaagccccttaatgct
ctggatgtcatgaagcaccaaccataccagctcaatgcatccttgtttactttccaacct
ccaggcacaaaggatggcctcccccaaaagtcaccaaccaaggtcaattcagccctggcc
atgaagcaagctcttcccccgcggccagtgaatgctggctcaccccccaacgtgcaggct
tcgtcggtgtactcggtaccggcctacacctctcagcctgccttccttgcagaggccacc
tcgccggtcagtgcctccccagtgcctgtgggcgtccccacctctccaaagcaagaatca
gcctcctcatcttattttgtggcaccaaggccaaagttctcagccaagaaaagtggtgtc
acaattcaggaaagtgggcgctccctttctcttcctggacggtcggtcccacccaccatt
gctacatctccttgggtacaccagcctgcctgtgcccactctagcaaaccaaccgttggg
ctagagagagcgaacaagagaccaactccttgggaagcagcagcaaagtctcctcttggt
ctagtggacgatgcctttggacccagaaccatgcaggaatccatcgtggcaaatgtggtc
tccgcggctcgaaggaaggtgctcccagggcccccagaggattggaacgagaaattgtcc
catgttcctcaaacccagaaggccaatgtgggctcttgtggaaggcaagagtgcagtgtc
atgtccctagccaataacatgtccaccaacccccaatacagttcagaggtgtcgtacgcg
tgttacaggcaggcctccagaaatgattctgaagtgatgtccatggagaccaggtctgat
tactcttttcccgtagctgattacaactacaacccacacccacggggatggagacgccag
acatga
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