KEGG   Propithecus coquereli (Coquerel's sifaka): 105811605
Entry
105811605         CDS       T08746                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
pcoq  Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03013  Nucleocytoplasmic transport
pcoq05014  Amyotrophic lateral sclerosis
pcoq05164  Influenza A
Brite
KEGG Orthology (KO) [BR:pcoq00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105811605 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    105811605 (RAE1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    105811605 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcoq03019]
    105811605 (RAE1)
   03036 Chromosome and associated proteins [BR:pcoq03036]
    105811605 (RAE1)
Messenger RNA biogenesis [BR:pcoq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     105811605 (RAE1)
Chromosome and associated proteins [BR:pcoq03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    105811605 (RAE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_EML_2 WD40 WDR55 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_NOL10_N PAC11 Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_ACSF4 NBCH_WD40 ASA1 Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_SPT8 ExoI_SH3
Other DBs
NCBI-GeneID: 105811605
NCBI-ProteinID: XP_012501310
Ensembl: ENSPCOG00000027779
UniProt: A0A2K6GV74
LinkDB
Position
Unknown
AA seq 368 aa
MSLFGTTSGFGTGGTSMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtctgtttggaacaacctcgggttttggaactggtgggaccagcatgtttggcagc
acaaccacagataatcacaaccctatgaaggatattgaagtaacatcttctcctgatgat
agcattggttgtctatcttttagcccaccaaccttgccggggaactttcttattgcagga
tcgtgggctaatgatgttcgctgctgggaagttcaagacaatggacaaaccattccaaaa
gcccagcagatgcacaccgggcccgtgctagatgtctgctggagtgatgatgggagcaaa
gtatttacggcatcatgtgataaaactgccaaaatgtgggacctcaacagtaatcaagca
atacagatcgcacagcatgatgctcctgttaaaaccatacattggatcaaagctccaaac
tacagctgcgtgatgactgggagctgggataagactttaaagttttgggatactcggtca
tcaaatcctatgatggttttgcaactccctgaaaggtgttactgtgctgatgtgatatac
cctatggccgtggtggcgactgcagagaggggcctcattgtctatcaattagagaatcaa
ccctctgagttcaggagaatagaatctccattgaaacatcagcatcgatgtgtggctatt
tttaaagacaaacagaacaagccaactggttttgccctgggaagtatcgaggggagagtt
gctattcactacatcaaccccccaaatcctgccaaagataacttcacctttaaatgtcat
cgatctaacggaaccaacacttcagctcctcaagacatctatgcggtaaatggaattgca
ttccatcctgttcatggcacccttgcaactgtgggatctgatggtagattcagcttctgg
gacaaagatgccagaacaaaactaaaaacttcggaacagttagatcaaccgatatcggct
tgctgcttcaatcacaatggaaacatatttgcgtatgcttccagctatgactggtcaaag
ggacatgagttttataatccccaaaagaaaaattacattttcctacgtaatgcagcagaa
gagctaaaacccaggaataagaagtag

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