Propithecus coquereli (Coquerel's sifaka): 105812393
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Entry
105812393 CDS
T08746
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like domain-containing protein 1 isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105812393 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoq03019
]
105812393 (PNLDC1)
Enzymes [BR:
pcoq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
105812393 (PNLDC1)
Messenger RNA biogenesis [BR:
pcoq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105812393 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
105812393
NCBI-ProteinID:
XP_012502271
Ensembl:
ENSPCOG00000025722
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MDVGADEFEQSLPLLQELVLDADFVGEALATCRPYSVRTGGCVLRLGTLVFFAFPLGLDI
EFTGLRSNLTGPQQISLFDLPSEWYLKTRQSVQQFTICQIGLSVFSSIERESNKYVAHSC
NFFLFPTTFGILDSEFSFQASSVQFLNHYGFNYNKFLKNGIPYMNEEQEKKIKHNILCGN
WKVRSSPDKDQIKVVIDEVTRWLDLAEEGEWMTLPGITGFQAFEVELVLRQALPNIWTVL
KEEGVIVKKVSKQHRWYLDNTSCDRVSCWREKILFSAKGFSVFFQMLVKAQKPLVGHNMM
MDLLHLHEKFYRPLPESYDQFKQNIHSLFPVIIDTKNVTKDIWKEMNFPRVSNLSEVYEV
LNSDLNPTKNSEPEIIHSHECEKYVETKYPHEAAYDAFLCGSVLLKVAHLLLERVHGIDP
IPESTFPQYLDVLAPYVNQVNLIRAGVPKINFSGPDYPSIRPPILILSVSKWPGVNEQQV
YREFQNLCKFDVRRLTRSQFLLLTNKFKDVRSTLKEYRSHPTLQVSLYRYWKHSPNINCL
LQVCGIVTTWALLAFILGRSGP
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggcgccgatgagttcgagcagagccttcctctgctgcaggagctcgtactg
gacgccgactttgtgggtgaggccttggccacctgcagaccttacagtgtaaggactggc
ggctgtgttctgcgcctggggactcttgtcttttttgccttccccttaggtctggacata
gagttcactggccttcgttctaacctgactgggccgcagcagatcagtctttttgatttg
ccatcggagtggtatctaaagacccgtcagagtgttcagcaatttacaatctgtcagatt
ggattgtctgtgttctccagcatcgaaagagagtcgaacaagtatgtagcccattcgtgc
aacttctttctctttcctacaacatttgggattttggattcagaattctctttccaggct
tctagtgttcagtttttgaatcactatggcttcaactacaacaagtttctcaaaaacgga
atcccatatatgaatgaagaacaggagaagaaaattaagcacaacattctgtgcgggaac
tggaaagtccgcagctctccagataaagaccaaatcaaggtggtaattgatgaagtgacg
cggtggctggacctggccgaggaaggagaatggatgactcttccgggtatcactgggttc
caggccttcgaggtcgagctggtgctgaggcaggccctccccaacatctggacggtgctg
aaagaggaaggggtgatagtgaagaaagtgagtaaacagcatcgctggtaccttgacaac
acctcttgtgatagagtgagctgttggagggagaagattcttttctctgcgaagggtttt
tctgtgtttttccaaatgctggtgaaggcccagaagcccttagtgggacataatatgatg
atggatctgctacatctccacgagaagttctacagacctctcccagaaagctacgatcaa
tttaagcagaacatccacagcctatttcccgttatcattgacaccaagaacgtaacaaag
gatatctggaaggaaatgaatttcccaagggtttccaacctttcagaagtgtatgaagtc
ctgaacagtgacttgaatcccaccaagaattccgaaccagagattattcactcacatgag
tgtgaaaaatacgtcgagacaaagtacccccacgaagctgcgtatgatgccttcctttgc
ggatcagttcttttgaaagtggcacacttgctcctagagagggtgcacggcatcgatccc
ataccggagtccacctttcctcagtaccttgacgtgctggccccttatgtgaaccaagtg
aacctcatccgagcgggggtccctaaaatcaatttttctggtccagattatcccagtatc
cgacctcccatcctcatcctcagtgtcagcaagtggcctggggtcaacgagcagcaggtc
taccgtgagtttcagaatctctgcaagttcgacgtcaggcgcctcacgcgaagccagttc
ctgctcctgaccaacaagttcaaggacgtgcggagtaccctgaaggagtacaggagccac
ccgaccctgcaggtctccctgtatcggtactggaaacactcgccaaacatcaactgcctg
ttacaggtctgtggcatagttaccacctgggccctcctggcgtttatcctgggaagatcc
ggcccctga
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integrated database retrieval system
