Propithecus coquereli (Coquerel's sifaka): 105812410
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Entry
105812410 CDS
T08746
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03082
ATP-dependent chromatin remodeling
pcoq04714
Thermogenesis
pcoq05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105812410 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
105812410 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
105812410 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoq03000
]
105812410 (ARID1B)
03021 Transcription machinery [BR:
pcoq03021
]
105812410 (ARID1B)
03036 Chromosome and associated proteins [BR:
pcoq03036
]
105812410 (ARID1B)
Transcription factors [BR:
pcoq03000
]
Eukaryotic type
Helix-turn-helix
ARID
105812410 (ARID1B)
Transcription machinery [BR:
pcoq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105812410 (ARID1B)
Chromosome and associated proteins [BR:
pcoq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105812410 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
105812410
NCBI-ProteinID:
XP_012502299
Ensembl:
ENSPCOG00000027362
LinkDB
All DBs
Position
Unknown
AA seq
2296 aa
AA seq
DB search
MAHNASAAAAAASTNSAKSGGSEAALKEGGSAAALSSSSSSSSAAASSSSSSSGPGSAME
TGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQ
QQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGSQADPPGQPLLSKPGDED
DAPPKMGEPAGGRYEHLGLGALGTQQPPVAVPGGGGGPAAVSEFNNYYGSAAPASGGPGG
RAGPCFDQHGGQQSPGMGMMHSASAAAGAPSSMDPLQNSHEGYPNSQYNHYPGYSRPGAG
GGGGGGGGGGSGGGGGGGGGAGAGAGGAGAGAVAAAAAAAAAAAAGGGGGYGGSSSGYGV
LSSPRQQGGGMMMGPGGGGAASLSKAAAGAAAGGFQRFAGQNQHPSGATPTLNQLLTSPS
PMMRSYGGSYPDYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAAS
PAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG
GSYGPPGPQRYPLGIQGRTPGAMGGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQP
PHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPV
EVLASEDAAFGLKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASP
HLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPM
PQERGFMAGTQRNPQMSQYGPQQTGPSMSPHPSPGGQMHPGISSFQQSNSSGTYGPQMSQ
YGPQGNYSRPPAYSGVPSASYSGPGPGVGINANNQMHGQGPSQPCGAVPLGRMPPAGMQS
RPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPG
MNQSGLMASSSPYSQPMNNSSGLMNTQAPPYSMTPTMVNSSAASMGLADMMSPGESKLPL
PLKADGKEEGTPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSI
SSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAV
GKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFE
CKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPP
TPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMGMPDVMGRM
PYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGA
SYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYG
MQYGNQQQEMYNQYGSSYSGPDRRPVQAQYPYPYSRERAQAPGQVQAHGVPPQVMGGPMQ
SSSGEGPQQNMWAARNDMPYPYQNRQGPGGPAQAPPYPGMSRTDDLMVPDQRINHESPWP
SHVSQRQPYMSSSASMQPITRPPQPAYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSP
FLPSMKMQKVMPTVPASQVSGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVT
PEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLID
IFGILMEYEVGDPSQKALDHNTARNDDSQSLADDSGKEEEDAECIDDEEDDEEDEEEDGE
KAEAEDKNSTALPAPDTTADPQEKPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFS
SGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSTGRKKEQEGKSDSEEQQEKSI
IATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKLLEDEPRSRDETPLCT
IAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQ
TYEKEEDGDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLL
HWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYA
TLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQ
QSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNS
LVASVICDVLFQIGQL
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atggcccataacgcgagcgccgcggccgccgccgccagcactaacagcgccaagagcggc
ggctccgaggcggctctcaaggagggtggaagcgccgccgcgctgtcctcctcctcctcc
tcctcctccgcggcggcgtcctcttcttcctcctcgtcgggcccgggctcggccatggag
acggggctgctccccaaccacaaactgaaaaccgttggcgaagcccccgccgcaccgccc
caccagcagcaccaccaccaccaccatgcccaccaccaccaccaccatgcccaccacctc
caccaccaccacgcactacagcagcagctaaaccagttccagcagcagcagcagcaacag
cagcagcagcagcaacatcccatttccaataacaacagcctgggcggcgcgggcggcggc
gcgcctcagcccggccccgacatggagcagccgcaacatggaggcgccaaggacagtgcc
gcgggcagccaggccgaccccccgggccagccgctgctgagcaagccgggcgacgaggac
gacgcgccgcccaagatgggggaaccggcgggcggccgctacgagcacctgggcctgggc
gccctgggcacgcagcagccgccggtcgccgtgcccgggggcggcggcggcccggcggcc
gtctcggagtttaataattactatggcagcgctgcccctgctagcggcggccccggcggc
cgcgctgggccttgctttgatcaacatggcggacaacaaagccccgggatggggatgatg
cactccgcctcagccgccgccggggcccccagcagcatggaccccctgcagaactcccac
gaagggtaccccaacagccagtacaaccattatccgggctacagccggcccggcgcgggc
ggcggcggcggcggcggaggaggaggaggcagcggaggaggaggaggaggaggaggagga
gcaggagcaggagcaggaggagcaggagcgggagctgtggcggcggcggccgcggcggcg
gcagcagcagcagcaggaggcggcggcggctatgggggctcgtcctcggggtacggggtg
ctgagctccccccggcagcagggcggcggcatgatgatgggccccgggggcggcggggcc
gcgagcctcagcaaggcggccgccggcgcggcggcggggggcttccagcgcttcgccggg
cagaaccagcacccgtcgggggccaccccgaccctcaaccagctgctcacctcgcccagc
cccatgatgcggagctacggcggcagctaccccgactacagcagccccagcgcgccgccg
ccgccgccgtcgcagccccagtcccaggcggcggcggcgggggcggcggcgggcggccag
caggcggccgcgggcatgggcttgggcaaggacatgggcgcccagtacgccgctgccagc
ccggcctgggcggccgcgcaacaaaggagtcacccggcgatgagccccggcacccccgga
ccgaccatgggcagatcccagggcagcccaatggatccaatggtgatgaagagacctcag
ttgtatgggatgggcagtaaccctcattctcagcctcagcagagcagtccctacccagga
ggttcctatggccccccaggcccacagcggtaccctctcggcatccagggtcggactcca
ggggccatgggaggaatgcagtacccacagcagcagatgccacctcagtatggacagcaa
ggtgtgagtggttactgccaacagggccaacagccatattacagccagcagccacagccc
ccgcacctcccgccccaggcgcagtatctgccgtcccagtcccagcagaggtaccagcca
cagcaggacatgtctcaggaaggctatggaactaggtctcaacctcctctggcccccgga
aaaccaaaccatgaagacttgaacttaatacaacaagaaagaccatcaagtttaccagtt
gaagtcttggcctcggaggatgcagcctttggactcaaggatctgtcaggctccatcgac
gacctccccacgggaacggaagcaactttgagctcagcggtcagtgcatccgggtccacg
agcagccaaggggaccagagcaacccagctcagtcacctttctctccacacgcatcccct
catctctccagcatcccagggggcccgtcgccttctcctgttggctctcctgtaggaagc
aaccagtcacgatctggccccatttctcccgcaagtattccaggcagtcagatgccacct
cagccacctgggagccagtcagagtccagctcccatcctgccttgagccagtcaccaatg
ccacaggagagagggtttatggcaggcacacaaagaaacccgcagatgtctcagtatgga
cctcaacagacaggaccctccatgtcgcctcatccttctcctgggggccagatgcatcct
ggaatcagtagctttcagcagagtaactcaagtgggacttacggtccacagatgagccag
tatggaccacaaggtaactactccagacccccagcgtatagtggggtgcccagtgcaagc
tacagcggcccagggcccggtgtgggtatcaatgccaacaaccagatgcatggacaaggg
ccaagccagccatgtggtgctgtgcccctgggacgaatgccaccagctgggatgcagagc
agaccatttcctggaaatatgagcagcatgacccccagttctcctggcatgtctcagcag
ggagggccaggaatggggccgccaatgccaactgtgaaccgtaaggcacaggaggcagct
gcagcagtgatgcaggctgctgcaaactcagcacaaagcaggcaaggcagtttccctggc
atgaaccagagtggacttatggcttccagctctccctacagccagcccatgaacaacagc
tctggcctgatgaacacacaggcgccgccatacagcatgacgcccaccatggtgaacagc
tcggcagcatctatgggtcttgcagatatgatgtctcctggtgaatccaaactgcccctg
cctctcaaagccgatggcaaagaggaaggcactccacagcctgagagcaagtcaaaggat
agctacagctctcagggtatttctcagcccccaaccccaggcaacctgccagtcccttcc
ccaatgtcccccagctctgctagcatctcctcatttcatggagatgaaagtgatagcatt
agcagcccaggctggccaaagactccatcaagccctaagtccagctcatccaccaccact
ggggagaagatcacaaaggtgtatgagctggggaacgagccagagagaaagctctgggtc
gaccgataccttaccttcatggaggagagaggctcccctgtctcgagcctgcctgcagtg
ggcaagaagcccctggacctgttccgactctatgtgtgcgtcaaagagattggaggtttg
gcacaggttaataaaaacaagaagtggcgtgagctggcaaccaacctaaatgttggcact
tcaagtagtgcagcaagctccctgaaaaagcagtatattcagtacctgtttgccttcgag
tgcaagatcgagcgaggggaggagcccccgccagaagtcttcagcaccggcgacacgaag
aagcagcccaagctccagccgccatctcctgctaactcaggatccttgcaaggcccacag
accccccagtcaactggcagcaattccatggcagaggttccaggtgacctgaagccacct
accccagcctccacccctcatggacagatgaccccaatgcaaggtggaagaagcagtaca
atcagtgtgcacgacccattctcagacgtgagtgattcgtccttcccaaaacggaactcc
atgactccaaatgccccgtaccagcagggcatgggcatgccagatgtgatgggcaggatg
ccctatgaacccaacaaggacccctttgggggcatgagaaaagtgcctggaagtagcgag
ccctttatgacgcaaggacagatgcccaacagcagtatgcaggacatgtataaccagagt
ccctctggagcaatgtccaacctgggcatggggcagcgacagcagtttccctacggagcc
agttacgatcgaaggcatgaaccttatggacagcagtatccaggccaaggtcctccctcg
ggacagccgccatatggagggcaccagccgggcctgtacccacagcagccgaattacaaa
cgccatatggacggcatgtatgggcctccagccaagcgccatgagggagacatgtacggc
atgcagtacggcaaccagcagcaggagatgtacaaccagtacggaagctcctactcggga
cccgacaggaggcctgtccaggcacagtacccctatccctacagcagagagagggcgcag
gccccggggcaggtgcaggcgcacggggtcccgccgcaggtgatgggtggcccgatgcag
tcgtcctctggtgaagggcctcagcagaacatgtgggcagcccgcaatgacatgccttac
ccctaccagaacaggcagggcccaggcggccctgcgcaggcccctccttatccaggcatg
agccgcacggacgatctgatggtacctgatcagaggataaatcacgagagcccgtggcct
tctcacgtcagccagcgtcagccttatatgtcgtcttcagcctccatgcagcccatcacg
cgcccgccgcagccggcctaccaaacgccaccgtcactgccaaatcatatctccagggcg
cccagcccagcgtccttccagcgctccctggagaaccgcatgtctccaagcaagtctccc
ttcctgccctctatgaagatgcagaaggtcatgcccacagtccccgcatcccaggtctct
gggccacccccccagccgccccccatcagaagggagatcacctttcctcccggctcagtg
gaagcctcccagccagtcttgaaacaaaggcgaaagattacctcaaaagatatcgttact
cctgaggcgtggcgtgtgatgatgtccctgaaatcaggtcttctggctgagagtacgtgg
gctttggacactattaatattcttctgtatgatgatagcactgttgctactttcaatctc
tcccagctgtctggatttcttgaactcttagtcgagtactttagaaaatgcctgattgac
atctttggaattctcatggaatacgaagtgggagaccccagccaaaaagcacttgaccac
aacacagcaaggaacgatgacagccagtctctggcagatgattctgggaaagaggaagaa
gatgctgaatgtattgacgacgaggaggacgacgaggaggatgaggaagaagatggcgag
aaggcagaagccgaagataagaacagtactgctctgcccgcgccagacaccactgcggac
ccgcaggagaagcctaagcaagccagcaagtttgacaagctgccaataaagatagtcaaa
aagaacaacctgtttgttgttgaccgatccgacaagctgggccgtgtgcaggagttcagc
agtggacttctgcactggcagcttggtgggggtgacaccacggagcacatccagactcac
tttgagagcaagatggaaattcctcctcgcaggcgcccacctccccctttaagctccaca
ggcagaaagaaagagcaggaaggcaaaagtgattctgaagagcagcaggagaaaagcatc
atagcaaccatcgatgacgtcctgtctgctcggccaggggcgctgcccgaagatgcaaac
cctgggccccaaaccgaaagcagtaagtttcccttcggtatacaacaagccaaaagtcat
cggaacatcaagctgctggaggacgagcccaggagccgagacgagactcctctgtgcacg
attgcgcactggcaggactcactggctaagcgctgcatctgtgtgtcaaatatcgtccgt
agcttgtcctttgtgcctggcaatgatgccgaaatgtccaaacatccaggcttggtgctg
atcctggggaagctgattcttcttcaccacgagcatccagagagaaaacgagcaccgcag
acctatgagaaagaggaggacggggacaagggggtggcctgcagcaaggacgagtggtgg
tgggactgcctcgaggtcttgagggataacacgttggtcacgttagccaacatttctggg
cagctagacttgtctgcttacacggaaagcatctgcttgccaattttggatggcttgctg
cactggatggtgtgcccatctgcagaggcacaagacccctttccaaccgtgggacccaac
tcggtcctgtcgcctcagagacttgtgctggagaccctctgtaaactcagtatccaggac
aacaatgtggacctgatcttggccactcctccatttagtcgtcaggagaaattctatgct
acgttagttaggtacgttggggatcgcaaaaacccagtctgtcgagaaatgtccatggcg
cttttatcgaaccttgcccaaggggatgcgctagcagcaagggcaattgctgtgcagaaa
ggaagcattggaaacttgataagcttcctggaggatggggtcacgatggcccagtaccag
cagagccagcataacctcatgcacatgcagcccccgcctctggaaccacctagcgtagac
atgatgtgcagggcggccaaggctttgctggccatggccagagtggacgaaaaccgctct
gaattccttttgcacgagggccggttgctggatatctcgatatcagcagtcctgaactct
ctggttgcatctgtcatctgtgacgtactgtttcagattgggcagttatga
DBGET
integrated database retrieval system
