Propithecus coquereli (Coquerel's sifaka): 105813215
Help
Entry
105813215 CDS
T08746
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105813215 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoq03019
]
105813215 (CNOT1)
Messenger RNA biogenesis [BR:
pcoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105813215 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105813215 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
105813215
NCBI-ProteinID:
XP_012503317
Ensembl:
ENSPCOG00000027139
UniProt:
A0A2K6GRU1
LinkDB
All DBs
Position
Unknown
AA seq
2379 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHFSKEI
DDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYRFFPQ
YPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDRFKNR
LKDYPQYCQHLASIGHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQAQAQA
QVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLVATDQ
TERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIEPN
FHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITL
AKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTMAIMN
VLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPKKDVK
QPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTIPLFQ
AHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIAAHHM
MRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNCELAC
CFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKVGGV
DPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELEQHLH
AIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADLLLRY
RECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQYDL
HLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRGNAPE
GLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVNLYH
SAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQ
QHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQD
HDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYA
WLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLR
VLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSE
INIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQLINA
LVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYP
NSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKF
WNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaattaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcagtttctgattcaggagtgtgcatcg
ctgattacaaagccaaattttatctcaacgctgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcacctcacttatttgcccagctgagtaaagtgctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctgttgaattcttctagctcagat
ctcagaggttttgctgcccagtttatcaaacagaagcttccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ctacacctcctcctctcccatctcctctttgggcagaagggagcttttggagttggacag
gagcagatagacgcttttcttaagacactgcgcagagattttccccaagaacgctgtccc
gtggtgctcgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggaggggtagctaaaaccatgatggagagctctttggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggtattccattacagagtatctctgctcctggcagtggtatc
tggagtgacggaaaagataaaagtgatggagcacaagcacacacgtggaatgtagaagtc
ttgattgatgttctcaaagaactgaacccgagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcagaggggtttgggtatggaagtattcccagtagacctcatatatagaccttggaaa
catgcagaaggccagctctccttcattcagcattcccttataaatccagaaatcttctgt
tttgcggattatccctgtcatactgttgccactgatattctgaaagcaccaccggaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctgttgaggctt
gcagaggttgggcagtatgagcaagtcaaacagctcttcagcttccctatcaaacactgt
ccagacatgctggtattggccttactacaaatcaacacctcctggcataccttgcgccat
gaactcatctccactctgatgccaattttccttggaaaccatcctaactcagctattatt
ttgcactatgcatggcatgggcagggacagtctccctcaattcgccaacttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgaccaggccaaattatctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccttttgcc
tttgtgattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaagtgg
ctcacggataagattcgagagcatggggagccttttatccaagcatgtatgactttttta
aagagacggtgcccatctatattgggtggacttgccccagagaaagaccagcccaaaagt
gctcaacttcctccagaaactctggcgacaatgttggcctgtctgcaggcttgtgcaggg
agtgtttctcaggagttatcagagaccattctcaccatggtggccaattgtagtaatgtt
atgaataaagccagacaaccaccgcctggagttatgccaaaaggacgccctcccagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacactcagagcatgcagggttttcctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccacccctttcaacccca
aatcagacaacagcattcagtggtattggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgaccggggctcttggactccctgcagtgaataacgaccctttt
gtacagaggaaactgggcacctctggactgaaccagcctacattccagcagagtaagatg
aaaccttcggacttgtctcaggtgtggccagaggcaaaccagcactttagcaaagagata
gatgatgaagcaaacagctatttccagcgaatatataaccacccgccacatccaaccatg
tctgttgatgaggtattagaaatgctacagagatttaaagactctactataaagagggaa
cgagaagtatttaactgtatgctgaggaacttgtttgaagaatatcggttttttcctcag
taccctgataaagaattacatataacagcctgcctgtttggtgggataatcgaaaaagga
ctggtcacttacatggcactgggtctggctctgcgatatgttcttgaagccttacgcaag
ccttttggatccaaaatgtattactttgggattgctgcgctagatagatttaaaaacaga
ttgaaggactatccccagtattgtcagcatttggcttctatcggtcactttatgcagttt
ccacatcatttacaggaatatatcgagtatggacagcagtccagagatcctcctgtgaaa
atgcaaggctctatcacaacccctggaagtattgcactggctcaggcccaggcccaggcc
caggttccagcaaaagctcctcttgctggtcaggttagcactatggtaaccacctcaacg
accaccactgttgctaaaacagttacagtcaccaggccaactggagtcagctttaagaaa
gatgtgccaccttctattaatactacaaatatagatacgttgcttgtggctacagatcaa
actgagagaattgtggaacccccagaaaatatccaagagaaaattgcttttatcttcaac
aatctctcacagtcgaatatgacacaaaaggtcgaagagctaaaggagactgtgaaagaa
gaatttatgccttgggtctcacagtatttggttatgaagagagtcagtattgagccaaac
tttcacagcctatattcaaacttccttgatacgctgaagaatcctgaatttaacaagatg
gttctgaatgagacctacagaaacatcaaagtcctactgacctctgataaagctgcggcc
aatttctcagatcgttctttgcttaagaacttgggacattggttaggaatgatcacatta
gctaaaaacaaacccatcttacacactgacttggatgtgaaatctttgctgctagaggct
tatgttaaaggacaacaagaattgctctatgtagtgccctttgttgccaaagtcttagag
tctagcattcgtagtgtggtttttaggccaccaaacccttggacaatggcaattatgaat
gtattagctgagctacatcaggaacatgacttaaagttaaacttgaagtttgagattgag
gtcctctgcaagaatcttgcattagacatcaatgaactaaaacctggaaacctcctaaag
gataaagatcgtctaaagaacttagatgagcaactctctgctccaaagaaagatgtcaag
cagccagaagaactccctcccattacaaccacaacaacttctaccacaccagctaccagc
actacctgtacagccacagttccaccacagccacagtacagctaccacgacatcaacgtc
tattccctcgcaggcctggcaccacacattactctaaacccaacaattcccttgtttcag
gcccatccacagttgaagcagtgtgtgcgtcaagcaattgaacgggctgtccaagagcta
gtccatcctgtggtggatcgatcaattaagattgccatgactacttgtgagcaaatagtc
aggaaggattttgccctggattctgaggaatctcgaatgcgaatagcagctcatcatatg
atgcgtaacttgacagctggaatggctatgattacttgcagggaacctttgctcatgagc
atatctaccaacctgaaaaacagttttgcctcagccctccgtactgcttctccgcaacaa
agggaaatgatggatcaggcagcagctcagttagctcaggacaattgtgaattggcttgc
tgttttattcagaagactgcagtagaaaaagcaggccctgagatggacaagagattagca
actgaatttgagctgagaaaacatgccaggcaagaagggcgcagatactgtgatcctgtt
gtattaacatatcaagctgagaggatgccagagcaaatcaggctgaaagttggtggtgtg
gacccaaagcagctggctgtttatgaagagtttgcacgtaatgtgcctggctttttgcct
acaaatgacttaagtcagcctacaggatttttagctcagcccatgaagcaagcttgggca
acagatgatgtagcacagatttatgataagtgcattacagaactggagcagcacctacat
gccatcccaccaactttagccatgaaccctcaagctcaggctcttcgaagtcttttggag
gttgtagtattatctcgaaactctcgggatgccatagctgctcttggattgctccagaag
gctgtagagggcttgctagatgccacaagtggtgctgatgctgacctgctgctgcgctac
agggaatgccacctcttggtcctaaaagctctgcaggatggccgagcatatgggtcccca
tggtgcaacaaacagatcacaaggtgcctaattgaatgtcgagatgaatataaatataac
gtggaggctgtggagttgctaattcgcaatcatttggttaatatgcagcagtatgatctt
cacctagctcagtcgatggagaatggtttaaactacatggctgtggcatttgctatgcaa
ttggtaaaaatcctgctggtggatgaaaggagtgttgcccatgttactgaggcagatctc
ttccacaccattgaaacccttatgaggattaatgctcattccagaggcaatgctccagaa
ggattgccccagctgatggaagtagtgcgatccaactatgaagcaatgattgatcgtgct
catggaggccctaactttatgatgcattctgggatctctcaagcctcagagtatgatgac
cctccaggcctgagggagaaggcagagtatcttctgagggaatgggtgaatctctaccat
tcagcagcagctggccgtgacagcactaaagctttctctgcatttgttggacaggtagag
cttttggaaagaaagatgcaccagcaaggaatactgaagaccgatgatctcataacaagg
ttctttcgtctgtgtactgaaatgtgtgttgaaatcagttaccgtgctcaggctgagcag
cagcacaatcctgctgctaatcccaccatgatccgagccaagtgctatcataacctggat
gcctttgttcgactcattgcactgctagtgaaacactcaggggaggccaccaacactgtc
acaaagattaatctgctgaacaaggtccttggaatagtagtgggagttctcctgcaagat
catgatgttcggcaaagtgaatttcagcagcttccctaccatcgaatttttatcatgctg
ctcttggaactgaatgcacccgaacatgtgttggaaaccattaatttccagacacttaca
gctttctgcaatacattccacatcttgaggcctaccaaagctcctggttttgtatatgcc
tggctggaactgatctcccatcggatatttattgcaagaatgctggcacatacgccacag
cagaagggatggcctatgtatgcacagctactgattgatttattcaagtatttagcgcct
ttccttagaaatgtggaactcaccaaacctatgcaaatcctctacaagggcactttaaga
gtgctgctggttcttttgcatgatttcccagagttcctttgtgattaccattatgggttc
tgtgatgtgatcccacctaattgtatccagttaagaaatttgatcctgagtgccttccca
agaaacatgaggctcccagacccattcactcctaatctgaaggtggacatgttgagtgaa
attaacattgcaccccggatactcaccaatttcactggagtgatgccacctcagttcaaa
aaggatttggattcctatcttaaaactcgatcgccagtcacttttctgtctgatctgcgc
agcaacttgcaggtatccaatgagcctggcaatcgctacaacctccagctcatcaatgca
ctggtgctctatgtaggaactcaggccattgcgcacatccacaacaagggcagcacacct
tcaatgagcaccatcacccactcagcgcacatggatatcttccagaacctggctgtggac
ttggacaccgagggtcgatacctcttcttgaatgcaattgcaaaccagctgcggtaccca
aatagccacactcactacttcagctgcaccatgctgtacctttttgcagaggccaacact
gaagctatccaggaacagatcacaagggttctcttggaacggttgattgtaaataggcca
catccttggggtcttcttattacctttattgagctgattaaaaatccagcgtttaagttc
tggaaccacgagtttgtacactgtgccccagaaatcgaaaagttattccagtcggttgca
cagtgctgcatgggacagaagcaggctcagcaagtaatggaagggacaggtgccagttag
DBGET
integrated database retrieval system
