Propithecus coquereli (Coquerel's sifaka): 105814237
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Entry
105814237 CDS
T08746
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq04140
Autophagy - animal
pcoq04142
Lysosome biogenesis
pcoq04145
Phagocytosis
pcoq04148
Efferocytosis
pcoq05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
105814237 (VPS39)
04142 Lysosome biogenesis
105814237 (VPS39)
04140 Autophagy - animal
105814237 (VPS39)
04148 Efferocytosis
105814237 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105814237 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoq04131
]
105814237 (VPS39)
Membrane trafficking [BR:
pcoq04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
105814237 (VPS39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
LIF1_N
Beta-prop_RIG_2nd
VPS18_solenoid_2nd
DUF4145
KCTD11_21_C
Lgl_C
SAM_CEP-1_C
EcoR124_C
Motif
Other DBs
NCBI-GeneID:
105814237
NCBI-ProteinID:
XP_012504586
Ensembl:
ENSPCOG00000013669
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQGDFSVP
DVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDD
LTVVLNEEGICTQKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRP
RFITSGGSNIIYVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQ
IHHIKNLYAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVL
SGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTL
LKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVD
QSKKANSPLKGHERTVQYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLP
RDRVLGFLIENFKGLAIPYLEHIIHVWEETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAG
KTPVPAGEEEGELGEYRQKLLNFLEISGYYDPGRLICDFPFDGLLEERALLLGRMGKHEQ
ALFIYVHILKDTRMAEEYCHKHYDQNKDGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEP
QANLQAALQVLELHHSKLDTTKALNLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNL
LHAEFLRVQEERILHQQVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPA
DT
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgctttcgagccagtgccgatcctagaaaagctgcctctgcagatcgactgt
ctggctgcctgggaggagtggcttcttgtgggaaccaaacaaggacatcttcttctctat
aggattcggaaggatgttggttgcaacaggttcgaagtgacactagagaaatccaataag
aacttctccaaaaagattcagcagatccatgtggtttcccagtttaagattctggtcagc
ttgttagaaaataacatttatgtccatgacctattgacatttcaacaaatcactactgtt
tcaaaggcaaagggagcttcactgttcacatgtgacctccagggggattttagtgtgcca
gatgtgcccaagtccatggcatggtgtgaaaattctatctgtgtgggtttcaagagagac
tactacctaataagggtggatggaaaggggtccatcaaagagctctttccaacaggaaaa
cagctggagcccttagttgcacctctggcagatggaaaagtagctgtgggtcaggatgat
ctcaccgtggtgctcaatgaggaggggatctgcacgcagaaatgtgccctgaactggaca
gacataccagtggccatggagcaccagcctccctacatcatcgcagtgttgcctcgatac
gtggagatccgaacgtttgagccgaggctattggtccagagcattgaattgcaaaggccc
cgtttcattacctcaggaggatcaaacattatctatgtggccagcaatcattttgtttgg
agacttattcctgttcccatggcaacccaaatccaacagcttctccaggacaagcagttt
gaattggctctgcagctggcagaaatgaaagatgactctgacagtgaaaagcagcaacaa
atccatcacatcaagaacttgtatgccttcaacctcttctgccagaagcgttttgatgag
tccatgcaggtctttgctaagctcggcacagatcccacccatgtgatgggcctgtaccct
gacctgctgcccacagactacaggaagcagctgcagtatccaaacccgttgcctgtgctc
tcgggggctgaactggagaaggctcacttagctctgattgactacctaacacagaaacga
agtcaactggtaaagaagctgaatgactctgatcaccagtctagcacctccccgctcatg
gaaggcactccgaccatcaaatccaagaagaagctgctgcaaatcattgacactaccctg
ctcaagtgctacctccatacaaatgtggccctggtagcccccttgctgcgtctggagaac
aatcattgccacatcgaggagagcgagcatgtgctgaagaaggctcacaagtacagtgag
ctgataatcctgtatgagaagaaagggctccacgagaaagctctgcaggtgctggtggac
cagtccaagaaagcaaactcccctctgaaaggccacgagaggacagtgcagtatctacaa
catctgggcacagaaaacctacatttgattttttcctactcagtatgggtgctgagagac
ttcccagaagatggcctgaagatatttactgaagatctcccagaggtggagtctctgcca
cgtgatcgagtgctcggcttcttaatagagaatttcaagggtctggctattccttatctg
gaacacatcatccacgtgtgggaggagacgggctctcggttccacaactgcctgatccag
ctgtactgtgagaaggtgcaaggcctgatgaaggagtatctcctgtccttccccgcaggc
aaaactccagtccctgctggagaggaagagggtgagctgggagaataccggcaaaagctc
cttaacttcttggagatttccggctactatgatccaggccggctcatctgcgatttccct
tttgatggcctcttagaagaacgagctctcctcttggggcgcatggggaaacatgaacaa
gctctcttcatttatgtccacatcttgaaggatacgaggatggctgaggagtactgccat
aaacactatgaccaaaataaagatggcaacaaagatgtgtatctgtccctgcttcggatg
tacctgtcgccccccagcattcactgcctggggcccatcaagctggaactcctggagcca
caggccaacctccaggctgccctgcaggtcctcgagctgcaccacagcaaactggacacc
accaaggccctcaaccttctgccagcaaacactcagatcaatgacatacgcatctttctg
gaaaaggtcttggaggaaaatgctcaaaagaaacggttcaatcaagtgctcaagaacctt
ctccatgcagagttcctgagggtccaggaagagcggattttacaccagcaggtgaagtgc
atcatcacagaggagaaagtgtgcatggtgtgtaagaagaagatcgggaacagtgcgttt
gcaagataccccaatggagtggttgtgcactacttctgttctaaagaggtaaacccagct
gacacctga
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integrated database retrieval system
