Propithecus coquereli (Coquerel's sifaka): 105814563
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Entry
105814563 CDS
T08746
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq04068
FoxO signaling pathway
pcoq05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
105814563 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
105814563 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcoq04121
]
105814563 (RAG1)
Enzymes [BR:
pcoq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105814563 (RAG1)
Ubiquitin system [BR:
pcoq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105814563 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-C3HC4_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
105814563
NCBI-ProteinID:
XP_012505030
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MAVSFPATLGLSSAPDEIQHPHIKFSEWKFKLFRVRSFEKAPEEAQKEKKDFSEGKPSLE
QSPTVLDKTGVQTPVLTQPALKAHPKFSKKSHDDGKARGKAIHQASLRHLCRICGDSFKT
DEYNRRYPVHGPVDGKTQGLLRKKEKRVTSWPDLIAKVFRIDVKADVDSIHPTEFCHNCW
SVMHRKFSSAPSEVYFPRNTAMEWHPHTPSCDICHTARQGLKRKGPQPNVQLSKKLKTVL
NQAKQAHQRKRRAQVRIRSREVMKKIANCSKIHLSTKLLAVDFPEHFVKAISCRICEHIL
ADPVETSCKHVFCRICIFRCLKVMGSYCPSCQYPCFPTDLESPVKSFLSVLNSLMVRCPA
KECNEEVSLEKYNHHVSSHRESKETFVHINKGGRPRQHLLSLTRRAQKHRLRELKLQVKA
FADKEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSSTDVGIIDG
LSGLSSSVDDYPVDTIAKRFRYDSALVSALMDMEEDILEGMRSQDLDDYLNGPFTVVVKE
SCDGMGDVSEKHGSGPVVPEKAVRFSFTVMKITIAHGSQNVKVFEEAKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKDSELMLEMGGILRTFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVFHSITRSHAENLERYEVWRSNPYHESAEELRDRVK
GVSAKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEAYKNPSASKEERKRWQATLDKLL
RKKMNLKPIMRMNGNFARKLMTKETVDAVCELIPSEERHEALRELMDLYLKMKPVWRSSC
PAEECPESLCQYSFHSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNALKNSGFTMS
SQASVGDPLGIEDSLESQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctccttcccagccacactgggactcagttctgccccagacgaaattcaacac
ccacatattaaattttcagaatggaaatttaagctattcagggtgagatccttcgagaag
gcacctgaagaagctcaaaaggaaaagaaggatttctccgaggggaaaccctctctagag
caatctccaacagtcctggacaagactggtgttcagacgccagtcctgactcaaccagca
ttaaaagcacaccctaagttttcgaagaaatcccatgatgatggaaaagcaagaggcaaa
gcgatccaccaagccagccttcgccatctctgccgcatctgtggggattctttcaaaact
gatgagtacaacaggagatacccagtccatgggcctgtggatggtaaaacccaaggcctt
ttacgaaagaaggaaaagagagtaacttcctggccagacctcattgccaaggttttccgg
attgacgtgaaggcagatgttgactcgatccaccccactgagttctgccataactgctgg
agcgtcatgcacaggaagttcagcagtgccccgagtgaggtttacttcccgaggaacaca
gccatggagtggcacccccacacgccctcctgtgacatctgccacactgcccgtcaggga
ctcaagaggaagggtcctcagccaaatgtgcagctcagcaaaaaactcaaaactgtgctc
aaccaagcaaaacaagcccatcaacgcaagagaagagctcaggtgaggatccgtagcagg
gaagtcatgaagaagattgccaactgcagtaaaatacatctcagtactaagctccttgca
gtggacttcccagagcacttcgtgaaagccatctcctgccggatttgtgaacacattctg
gctgaccctgtggagaccagctgtaagcatgtattttgtaggatctgcattttcaggtgc
ctcaaagtcatgggcagctattgtccctcttgccaatatccatgcttccctactgacctg
gagagtccagtgaagtcctttctgagtgtcttgaattccctgatggtgagatgtccagca
aaagaatgcaatgaggaggtcagtttggaaaaatataatcaccatgtctcaagtcacagg
gaatcaaaagagacttttgtgcatattaataagggaggccggccccgtcagcatcttctg
tcattgacccggagagctcagaaacaccggctgagggagctcaagctgcaagtcaaggct
tttgctgacaaagaagaaggtggagacgtgaagtctgtgtgcctgaccttgttcctgctg
gccctgagggcgaggaatgagcacaggcaagcggacgagctagaggccatcatgcaggga
cggggatccggcctgcagccagctgtttgcttggccatccgcgtcaacaccttcctcagc
tgcagtcagtaccacaagatgtacaggaccgtgaaagccatcacggggaggcagattttt
cagcctttgcatgcccttcggaatgctgagaaggtcctccttccgggctaccaccccttt
gagtggcagccacctctgaagaacgtgtcttccagcactgatgtgggcattattgatggg
ctgtctggactatcctcctccgtggatgattacccagtggacaccattgccaagaggttc
cgctatgattcggctttggtatctgctttgatggacatggaagaagacatcttggagggc
atgagatcccaggacctggatgactacctgaatggccccttcactgtagtggtgaaggag
tcttgtgatgggatgggagatgtgagtgagaagcatggcagtgggccggtagtcccagaa
aaggcagttcgtttttcattcacggtcatgaaaattactattgcgcatggctcacagaat
gtgaaggtgtttgaggaagccaaacctaactctgagctgtgctgcaagccattgtgtctt
atgctggcagatgagtctgaccacgagactctgactgccatcctgagccctctcattgct
gagagggaggccatgaaggacagtgaattgatgcttgagatgggaggcatcctcaggact
ttcaagttcatcttcaggggcaccggatatgatgaaaaacttgtccgggaagtggaaggc
ctcgaggcttctggctctgtctacatttgtactctttgtgatgccacccgtctggaagcc
tctcaaaaccttgtgttccactccataaccagaagccatgctgagaacctggaacgctat
gaggtctggcgttccaacccgtaccatgagtctgcggaagaactgcgggacagggtgaaa
ggggtctcagccaaacctttcattgagacggtcccttccatagatgcactgcactgtgac
attggcaatgcggctgagttctataagattttccaactggagataggggaggcatataag
aatcccagtgcttccaaagaggaaagaaaaagatggcaggccacactggacaagcttctc
cggaagaagatgaacctgaaaccaatcatgaggatgaacggcaactttgccaggaagctc
atgaccaaagagactgtcgatgcagtctgcgaattaattccttctgaggagaggcatgaa
gctctgagggagctaatggacctctacctgaaaatgaaacccgtatggcgatcatcatgc
cctgctgaagagtgcccagaatccctctgccagtatagtttccactctcagcgttttgct
gagctcctctcaaccaagttcaagtataggtacgagggcaaaatcaccaattattttcac
aaaactctggcacatgttcctgaaattatcgagagggatggctctattggggcatgggcg
agtgagggaaatgagtcaggcaacaaactgttcagacgcttccggaaaatgaatgctaga
cagtccaagtgctatgaaatggaagatgtcctgaaacaccactggttatatacttccaaa
tacctccagaagtttatgaatgctcataatgcattaaaaaactctgggtttaccatgagc
tcgcaggcaagtgtaggggacccattaggcatagaggactctttggaaagccaagattca
atggaattttaa
DBGET
integrated database retrieval system
