Propithecus coquereli (Coquerel's sifaka): 105815151
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Entry
105815151 CDS
T08746
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105815151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoq03019
]
105815151
03012 Translation factors [BR:
pcoq03012
]
105815151
Enzymes [BR:
pcoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105815151
Messenger RNA biogenesis [BR:
pcoq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105815151
Translation factors [BR:
pcoq03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105815151
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
HA2_C
AAA_22
HA2_N
nSTAND3
AAA_19
AAA_14
ATPase
AAA_23
NPHP3_N
PhoH
RsgA_GTPase
DUF6782
AAA_25
NACHT
Motif
Other DBs
NCBI-GeneID:
105815151
NCBI-ProteinID:
XP_012505743
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MSYDYHQNWGRDGGPRSSSGDYGGGHRGGHGGSRGSGGGGGGGVGRGGRGRHPGHLKGRE
IGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKNDKDSEAQISWFAPED
HGYGTEVSAKNKPSSEKKHDNQEKTLINQEKRTFRIRNKSYIDRDSEYLLQENEPNVTLD
QQLLEDLQKKKNDLRYIEMQHFREKLPSYGMRKELVNLIDNHQVTVISGETGCGKTTQVT
QFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLP
RKQGSILYCTTGIILQWLQSDPRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRSDLK
VILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEQRSQFKRG
FMQGHINRQEKEEKETIYKERWPDYVRELRRRYSASTVDVVEMMDDDKVDLNLIAALIRH
IVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTP
PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMTAEWVSKANAKQRKG
RAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDP
PSSEAVLLSIRHLMELNALDKHEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTI
AASLSFKDPFVIPLGKEKIADARRKELARNSRSDHLTVVNAFEGWEEARRRGFRYEKDYC
WEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNVN
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcagaactggggccgcgatggagggccccgcagctccagtggg
gactatggagggggtcatcgagggggccacggagggagccgaggctccggaggcggcggc
ggaggaggggttggtcgtggcggcaggggccggcatcccgggcacctgaaaggccgcgaa
atcggcctgtggtacgcgaaaaaacagggacagaagaacaaggaagcggaaagacaggag
agagctgtagtacacatggatgaaagacgagaagaacaaattgtacagctactgaattct
gtccaggctaagaatgataaagattcagaagcacagatatcttggtttgctcctgaggat
catggatacggtactgaagtttctgctaaaaacaaaccaagctcagagaagaaacatgat
aaccaggaaaagacattgatcaaccaagaaaaaaggacgtttagaatcaggaacaaatcg
tatatcgaccgagattctgagtatctcttgcaagaaaatgaaccaaatgtaaccttagac
caacaattattggaagatttacaaaagaaaaaaaatgaccttcggtatattgagatgcag
catttcagagaaaagctgccttcatatggaatgcgaaaggaattggtgaatttaattgat
aaccatcaggtaactgtaataagtggtgaaactggttgtggaaaaaccactcaagttact
cagttcattttggataactacattgaaaggggaaaaggatctgcttgcagaatagtttgt
actcagccaagaagaattagtgccatttcagttgcggagagagtggctgcagaaagagca
gaatcttgtggcaatggtaatagtactggataccaaattcgtctccagagtcggttgcca
aggaaacagggttctatcttatattgtacaacaggaattatccttcagtggctccagtca
gacccgcgtttgtctagtgttagtcatattgtgcttgatgaaattcatgaaagaaatcta
cagtcagatgttttaatgactgttattaaagatcttctcaactttcgttctgacctgaaa
gtaatattgatgagtgcaacattgaatgctgagaaattttcagaatattttggtaactgt
ccaatgatacacatacctggttttacttttccagttgtagagtatcttttggaagatata
attgaaaaaataagatatgttccagagcaaaaagaacagagatcccagtttaagaggggt
ttcatgcaagggcacataaatcggcaagaaaaagaagaaaaagaaacaatctataaagaa
cgctggccagattatgtaagggaactacgaagaaggtattctgcaagtactgtagatgtt
gtagaaatgatggatgatgataaagttgatctgaatttgattgctgcccttatccgacat
attgttttggaagaagaggatggtgcaatactggtctttctaccaggctgggacaatatc
agcactttacatgatcttttgatgtcacaagtgatgtttaaatcagataagtttctaatt
atacctttacattcgctgatgcctacagttaatcagacacaggtatttaaaaaaactcct
cctggcgttcggaaaatagtaattgctaccaacattgctgaaactagcattaccatagat
gatgtagtttatgtgatagatggaggaaaaataaaagagacacactttgacactcagaac
aacatcagtacaatgaccgctgagtgggttagtaaagctaatgccaaacagaggaaaggt
cgagctggaagagttcagcctggacattgctatcatctttataatggtcttagagcaagt
cttctagatgactatcaactgccagaaattttgagaactcctttggaagagctttgttta
caaataaagattttaaggctaggtggaattgcttattttctgagtaggttaatggatcca
ccatcaagtgaggcagtgttgctctccataagacacctgatggaactgaatgctttggat
aaacatgaagaattgacacctcttggagtccacttagcacgattaccagttgaaccacat
attggaaaaatgattctttttggagctctgttctgttgcttagacccagtactcactatt
gctgctagtctcagcttcaaagatccctttgtcattccattgggaaaagaaaagattgca
gatgcaagaagaaaagaattggcaaggaatagtagaagtgaccacctaacagttgtgaat
gcatttgagggctgggaagaagctaggcgacgtggtttcagatacgaaaaggactattgc
tgggaatattttctgtcttcaaacacactgcagatgctgcataacatgaaaggacagttt
gctgagcatcttcttggggctggatttgtaagcagtagaaatcctaaagatccagaatct
aatgtaaat
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